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Platform GPL17960 Query DataSets for GPL17960
Status Public on Feb 02, 2014
Title IBMT Campylobacter jejuni epitope mapping [set1]
Technology type spotted peptide or protein
Distribution custom-commercial
Organism Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Manufacturer JPT Peptides Technology
Manufacture protocol Pepstar peptide microarrays (JPT)
 
 
Submission date Nov 19, 2013
Last update date Feb 02, 2014
Contact name Sebastian Hoppe
E-mail(s) sebastian.hoppe@izi-bb.fraunhofer.de
Organization name Fraunhofer Institute for Cell Therapy and Immunology
Department Bioanalytics and Biosensorics
Lab Molecular Bioengineering
Street address Am Mühlenberg 13
City Potsdam
ZIP/Postal code 14476
Country Germany
 
Samples (8) GSM1269390, GSM1269391, GSM1269392, GSM1269393, GSM1269394, GSM1269395 
Series (1)
GSE52537 Epitope Mapping of potential novel immunogenic proteins of Klebsiella pneumoniae MGH 78578

Data table header descriptions
ID identifier
Block Each incubation chamber encompasses four blocks
Column The column within the subarray
Row the row within the subarray
Number Peptide number
PT_SEQUENCE Amino acid sequence
PT_ACC UniprotKB/Swiss-Prot Accession of the corresponding full-length protein
SPOT_ID controls

Data table
ID Block Column Row Number PT_SEQUENCE PT_ACC SPOT_ID
1 1 1 1 Protein 1_25 VGRRLTLDAPLVNGR A6T5P6
2 1 2 1 Protein 1_27 APLVNGRGHVRVGDS A6T5P6
3 1 3 1 Protein 1_29 HVRVGDSSWPVIADE A6T5P6
4 1 4 1 Protein 1_31 WPVIADEDFAAGSKV A6T5P6
5 1 5 1 Protein 1_33 FAAGSKVEVIAVEGI A6T5P6
6 1 6 1 Protein 1_35 VIAVEGITLRIRPAV A6T5P6
7 1 7 1 Protein 2-1 MAALNSKVRKAVIPV A6TAK9
8 1 8 1 Protein 2-3 RKAVIPVAGLGTRML A6TAK9
9 1 9 1 Protein 2-5 GLGTRMLPATKAIPK A6TAK9
10 1 10 1 Protein 2-7 ATKAIPKEMLPLVDK A6TAK9
11 1 11 1 process-control GGSGGSDYKDDDDK process-control
12 1 12 1 Protein 2-10 VDKPLIQYVVNECIA A6TAK9
13 1 13 1 Protein 2-36 DEYESDLSRDNLAEM A6TAK9
14 1 1 2 Protein 2-38 RDNLAEMISRFDETG A6TAK9
15 1 2 2 Protein 2-40 SRFDETGASQIMVEP A6TAK9
16 1 3 2 Protein 2-42 SQIMVEPVEDVTAYG A6TAK9
17 1 4 2 Protein 2-44 EDVTAYGVVDCKGES A6TAK9
18 1 5 2 Protein 2-46 VDCKGESLKPGESVP A6TAK9
19 1 6 2 Protein 2-48 KPGESVPMVGVVEKP A6TAK9
20 1 7 2 Protein 2-50 VGVVEKPKADVAPSN A6TAK9

Total number of rows: 676

Table truncated, full table size 25 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
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