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Status
Public on Feb 22, 2014
Title
PfPv500 version1
Technology type
spotted peptide or protein
Distribution
custom-commercial
Organisms
Plasmodium falciparum ; Plasmodium vivax Manufacturer
Antigen Discovery Inc.
Manufacture protocol
Antigen Discovery Inc.
Description
The arrays used in this study came from a commercially available source, Antigen Discovery Inc. (Irvine, CA). It features 500 Plasmodium falciparum and 500 P. vivax ORFs spotted as in vitro rapid translation/transcription (IVTT) reactions, and some additional purified proteins, onto nitrocellulose-coated slides. Multiple spots consisting of reactions lacking plasmid templates ('no DNA' controls) are present on each array and used for data normalization. The array is called PfPv500 version1.
Submission date
Feb 21, 2014
Last update date
Feb 22, 2014
Contact name
Elisabeth Baum
Organization name
University of California Irvine
Street address
Med Surge II
City
Irvine
State/province
CA
ZIP/Postal code
92697
Country
USA
Samples (179)
GSM1332775 , GSM1332776 , GSM1332777 , GSM1332778 , GSM1332779 , GSM1332780
GSM1332781 ,
GSM1332782 ,
GSM1332783 ,
GSM1332784 ,
GSM1332785 ,
GSM1332786 ,
GSM1332787 ,
GSM1332788 ,
GSM1332789 ,
GSM1332790 ,
GSM1332791 ,
GSM1332792 ,
GSM1332793 ,
GSM1332794 ,
GSM1332795 ,
GSM1332796 ,
GSM1332797 ,
GSM1332798 ,
GSM1332799 ,
GSM1332800 ,
GSM1332801 ,
GSM1332802 ,
GSM1332803 ,
GSM1332804 ,
GSM1332805 ,
GSM1332806 ,
GSM1332807 ,
GSM1332808 ,
GSM1332809 ,
GSM1332810 ,
GSM1332811 ,
GSM1332812 ,
GSM1332813 ,
GSM1332814 ,
GSM1332815 ,
GSM1332816 ,
GSM1332817 ,
GSM1332818 ,
GSM1332819 ,
GSM1332820 ,
GSM1332821 ,
GSM1332822 ,
GSM1332823 ,
GSM1332824 ,
GSM1332825 ,
GSM1332826 ,
GSM1332827 ,
GSM1332828 ,
GSM1332829 ,
GSM1332830 ,
GSM1332831 ,
GSM1332832 ,
GSM1332833 ,
GSM1332834 ,
GSM1332835 ,
GSM1332836 ,
GSM1332837 ,
GSM1332838 ,
GSM1332839 ,
GSM1332840 ,
GSM1332841 ,
GSM1332842 ,
GSM1332843 ,
GSM1332844 ,
GSM1332845 ,
GSM1332846 ,
GSM1332847 ,
GSM1332848 ,
GSM1332849 ,
GSM1332850 ,
GSM1332851 ,
GSM1332852 ,
GSM1332853 ,
GSM1332854 ,
GSM1332855 ,
GSM1332856 ,
GSM1332857 ,
GSM1332858 ,
GSM1332859 ,
GSM1332860 ,
GSM1332861 ,
GSM1332862 ,
GSM1332863 ,
GSM1332864 ,
GSM1332865 ,
GSM1332866 ,
GSM1332867 ,
GSM1332868 ,
GSM1332869 ,
GSM1332870 ,
GSM1332871 ,
GSM1332872 ,
GSM1332873 ,
GSM1332874 ,
GSM1332875 ,
GSM1332876 ,
GSM1332877 ,
GSM1332878 ,
GSM1332879 ,
GSM1332880 ,
GSM1332881 ,
GSM1332882 ,
GSM1332883 ,
GSM1332884 ,
GSM1332885 ,
GSM1332886 ,
GSM1332887 ,
GSM1332888 ,
GSM1332889 ,
GSM1332890 ,
GSM1332891 ,
GSM1332892 ,
GSM1332893 ,
GSM1332894 ,
GSM1332895 ,
GSM1332896 ,
GSM1332897 ,
GSM1332898 ,
GSM1332899 ,
GSM1332900 ,
GSM1332901 ,
GSM1332902 ,
GSM1332903 ,
GSM1332904 ,
GSM1332905 ,
GSM1332906 ,
GSM1332907 ,
GSM1332908 ,
GSM1332909 ,
GSM1332910 ,
GSM1332911 ,
GSM1332912 ,
GSM1332913 ,
GSM1332914 ,
GSM1332915 ,
GSM1332916 ,
GSM1332917 ,
GSM1332918 ,
GSM1332919 ,
GSM1332920 ,
GSM1332921 ,
GSM1332922 ,
GSM1332923 ,
GSM1332924 ,
GSM1332925 ,
GSM1332926 ,
GSM1332927 ,
GSM1332928 ,
GSM1332929 ,
GSM1332930 ,
GSM1332931 ,
GSM1332932 ,
GSM1332933 ,
GSM1332934 ,
GSM1332935 ,
GSM1332936 ,
GSM1332937 ,
GSM1332938 ,
GSM1332939 ,
GSM3637787 ,
GSM3637788 ,
GSM3637789 ,
GSM3637790 ,
GSM3637791 ,
GSM3637792 ,
GSM3637793 ,
GSM3637794 ,
GSM3637795 ,
GSM3637796 ,
GSM3637797 ,
GSM3637798 ,
GSM3637799 ,
GSM3637800 Series (2)
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Data table header descriptions ID ORF PlasmoDB_ID PlasmoDB Accession number corresponding to GenBank ID
ORF_Fragment Specific gene fragment spotted for large ORFs cloned in multiple fragments
Spot Description Description of product spotted
Organism For Plasmodium sp. ORFs, species of spotted Orf is given
Data table ID ORF PlasmoDB_ID ORF_Fragment Spot Description Organism 33
PF07_0007 PF3D7_0702400
Exon 1 Segment 1
conserved Plasmodium protein, unknown function
Plasmodium falciparum 3D7
34
MAL7P1.14 PF3D7_0703700
Exon 1 Segment 1
conserved Plasmodium protein, unknown function
Plasmodium falciparum 3D7
35
PFI0010c PF3D7_0900200
Exon 2 Segment 1
rifin (RIF)
Plasmodium falciparum 3D7
36
PFE1600w PF3D7_0532300
Exon 2 Segment 1
Plasmodium exported protein (PHISTb), unknown function
Plasmodium falciparum 3D7
37
PFA0110w PF3D7_0102200
Exon 2 Segment 2
ringinfected erythrocyte surface antigen (RESA)
Plasmodium falciparum 3D7
38
MAL13P1.176 PF3D7_1335300
Exon 1 Segment 2
reticulocyte binding protein 2 homologue b (RH2b)
Plasmodium falciparum 3D7
39
PF08_0137 PF3D7_0801000
Exon 2 Segment 1
Plasmodium exported protein (PHISTc), unknown function
Plasmodium falciparum 3D7
40
PFI1735c PF3D7_0935900
Exon 2 Segment 1
ringexported protein 1 (REX1)
Plasmodium falciparum 3D7
41
PF13_0275 PF3D7_1353100
Exon 2 Segment 1
Plasmodium exported protein, unknown function
Plasmodium falciparum 3D7
42
PFI0370c PF3D7_0907700
Exon 1 Segment 1
subunit of proteaseome activator complex, putative
Plasmodium falciparum 3D7
43
PFC0130c PF3D7_0302800
Exon 1 Segment 1
conserved Plasmodium protein, unknown function
Plasmodium falciparum 3D7
44
PF07_0048 PF3D7_0711700
Exon 2 Segment 1
erythrocyte membrane protein 1, PfEMP1 (VAR)
Plasmodium falciparum 3D7
45
PFA0430c PF3D7_0108700
Exon 1 Segment 1
secreted ookinete protein, putative (PSOP24)
Plasmodium falciparum 3D7
46
PFE1355c PF3D7_0527200
Exon 2 Segment 1
ubiquitin carboxylterminal hydrolase, putative
Plasmodium falciparum 3D7
47
PF11_0294 PF3D7_1128300
Exon 1 Segment 1
6phosphofructokinase (PFK11)
Plasmodium falciparum 3D7
48
PF10_0348 PF3D7_1035700
Exon 1 Segment 1
duffy bindinglike merozoite surface protein (DBLMSP)
Plasmodium falciparum 3D7
49
PF10_0211 PF3D7_1021700
Exon 1 Segment 2
conserved Plasmodium membrane protein, unknown function
Plasmodium falciparum 3D7
50
PFA0125c PF3D7_0102500
Exon 1 Segment 2
erythrocyte binding antigen181 (EBA181)
Plasmodium falciparum 3D7
51
PF14_0102 PF3D7_1410400
Exon 1 Segment 1
rhoptryassociated protein 1 (RAP1)
Plasmodium falciparum 3D7
52
PFE0655w PF3D7_0513200
Exon 2 Segment 3
conserved Plasmodium protein, unknown function
Plasmodium falciparum 3D7
1015 101 Kbytes .Supplementary data files not provided
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