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Platform GPL18424 Query DataSets for GPL18424
Status Public on Aug 02, 2014
Title Agilent-038200 Clostridium difficile Clos_diff630
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Clostridioides difficile
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
 
Submission date Mar 14, 2014
Last update date Aug 04, 2014
Contact name Jeroen Corver
E-mail(s) J.corver@lumc.nl
Organization name LUMC
Department Medical Microbiology
Street address Albinusdreef 2
City Leiden
ZIP/Postal code 2333ZA
Country Netherlands
 
Samples (6) GSM1348626, GSM1348627, GSM1348628, GSM1348629, GSM1348630, GSM1348631
Series (1)
GSE55926 Transcriptional profiling of an HtrA proteases knock-out compared to wild type

Data table header descriptions
ID
probe name
SPOT_ID accession string
SEQUENCE Probe Sequence
Name

Data table
ID probe name SPOT_ID SEQUENCE Name
CUST_1_PI427428598 CUST_1_PI427428598 CDP01|CDP01_YP_659577.1_GeneID:... TCAAGTTTATGAAAGTGAATGTGGAAATTATATATTTAAAAAATCTGATGAAAGTTTTTT CDP01_YP_659577.1_GeneID:...
CUST_10_PI427428598 CUST_10_PI427428598 CDP04|CDP04_YP_659580.1_GeneID:... ACAACAGGACAACCACTGAATGAACCTAAGGTAGTTGAACAGATTGAAAAGACAACTTCG CDP04_YP_659580.1_GeneID:...
CUST_100_PI427428598 CUST_100_PI427428598 CD0023|ctsR_YP_001086486.1_Gene... AAAAAAGGTGGCGGAGGATATGTTCAAATAGAAAAAATACGAAAAAGTAAAGATGGGCAT ctsR_YP_001086486.1_Gene...
CUST_1000_PI427428598 CUST_1000_PI427428598 CD0318|CD0318_YP_001086787.1_Ge... GTATCGGTGCAATTATCGAAACGCCAGGATTTTATCCTAATCTGACAGGAACGGAGAACT CD0318_YP_001086787.1_Ge...
CUST_10000_PI427428598 CUST_10000_PI427428598 CD3314|hydA_YP_001089830.1_Gene... AGAGTGACAGAAGGTGGAACTCTTCCAATGTTTACATCTTGTTGTCCAGCTTGGGTAAAA hydA_YP_001089830.1_Gene...
CUST_10001_PI427428598 CUST_10001_PI427428598 CD3314|hydA_YP_001089830.1_Gene... AAGAGTGACAGAAGGTGGAACTCTTCCAATGTTTACATCTTGTTGTCCAGCTTGGGTAAA hydA_YP_001089830.1_Gene...
CUST_10002_PI427428598 CUST_10002_PI427428598 CD3314|hydA_YP_001089830.1_Gene... AAAGAGTGACAGAAGGTGGAACTCTTCCAATGTTTACATCTTGTTGTCCAGCTTGGGTAA hydA_YP_001089830.1_Gene...
CUST_10003_PI427428598 CUST_10003_PI427428598 CD3315|hydN2_YP_001089831.1_Gen... AGCAGACCCAAACAAATGTACAGGTTGTAGAGCTTGTGAAGTAGCTTGTTTTACAATGCA hydN2_YP_001089831.1_Gen...
CUST_10004_PI427428598 CUST_10004_PI427428598 CD3315|hydN2_YP_001089831.1_Gen... GGCTCTTTTGTAATAGCAGACCCAAACAAATGTACAGGTTGTAGAGCTTGTGAAGTAGCT hydN2_YP_001089831.1_Gen...
CUST_10005_PI427428598 CUST_10005_PI427428598 CD3315|hydN2_YP_001089831.1_Gen... AGGCTCTTTTGTAATAGCAGACCCAAACAAATGTACAGGTTGTAGAGCTTGTGAAGTAGC hydN2_YP_001089831.1_Gen...
CUST_10006_PI427428598 CUST_10006_PI427428598 CD3315A|CD3315A_YP_001089832.1_... AGCAAAGATATTCAAAGTGTGAAATCTGTGGAGTATTAATTGATGATACTGATAAGGTGT CD3315A_YP_001089832.1_...
CUST_10007_PI427428598 CUST_10007_PI427428598 CD3315A|CD3315A_YP_001089832.1_... AAGCAAAGATATTCAAAGTGTGAAATCTGTGGAGTATTAATTGATGATACTGATAAGGTG CD3315A_YP_001089832.1_...
CUST_10008_PI427428598 CUST_10008_PI427428598 CD3315A|CD3315A_YP_001089832.1_... AAAGCAAAGATATTCAAAGTGTGAAATCTGTGGAGTATTAATTGATGATACTGATAAGGT CD3315A_YP_001089832.1_...
CUST_10009_PI427428598 CUST_10009_PI427428598 CD3316|fdhD_YP_001089833.1_Gene... AGTCACTTGTGAAGATGTAGCAAGGCATAATGCAATGGATAAGGCTATTGGATTTTGTGT fdhD_YP_001089833.1_Gene...
CUST_1001_PI427428598 CUST_1001_PI427428598 CD0318|CD0318_YP_001086787.1_Ge... ATGGTCTTGACCCTATTGGTATTGCGGAGATGAGAAAGTTTATTAGGGACTTGAGCGTTG CD0318_YP_001086787.1_Ge...
CUST_10010_PI427428598 CUST_10010_PI427428598 CD3316|fdhD_YP_001089833.1_Gene... GTCACTTGTGAAGATGTAGCAAGGCATAATGCAATGGATAAGGCTATTGGATTTTGTGTT fdhD_YP_001089833.1_Gene...
CUST_10011_PI427428598 CUST_10011_PI427428598 CD3316|fdhD_YP_001089833.1_Gene... TCACTTGTGAAGATGTAGCAAGGCATAATGCAATGGATAAGGCTATTGGATTTTGTGTTT fdhD_YP_001089833.1_Gene...
CUST_10012_PI427428598 CUST_10012_PI427428598 CD3317|fdhF_YP_001089834.1_Gene... TGACTTATCAGTGGTGGGTTGGAGCTTGCAATGAACTTACAATAGCAAATTTAGACCCT fdhF_YP_001089834.1_Gene...
CUST_10013_PI427428598 CUST_10013_PI427428598 CD3317|fdhF_YP_001089834.1_Gene... CCACAAGGAGATGTAAAACCAGACTGGCAAATTATAAGCGAAATTTCTACAGCAATGGGA fdhF_YP_001089834.1_Gene...
CUST_10014_PI427428598 CUST_10014_PI427428598 CD3317|fdhF_YP_001089834.1_Gene... TTCGCTGCTGAATGGAGACCACCTATGGAAGTTGAAGATGATGAATACCCATTTAGTTTA fdhF_YP_001089834.1_Gene...

Total number of rows: 11277

Table truncated, full table size 1843 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL18424_feature_number_table.txt.gz 505.9 Kb (ftp)(http) TXT

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