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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 15, 2014 |
| Title |
Agilent-020109 Porcine Gene Expression Microarray (44K) (Feature number version) |
| Technology type |
spotted DNA/cDNA |
| Distribution |
commercial |
| Organism |
Sus scrofa |
| Manufacturer |
Agilent |
| Manufacture protocol |
http://www.agilent.com/
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| |
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| Submission date |
Mar 18, 2014 |
| Last update date |
May 19, 2016 |
| Contact name |
Laurence Liaubet |
| E-mail(s) |
laurence.liaubet@inra.fr
|
| Organization name |
INRA
|
| Department |
Animal Genetic
|
| Lab |
GenPhySE
|
| Street address |
chemin de borde rouge
|
| City |
Castanet tolosan |
| ZIP/Postal code |
31326 |
| Country |
France |
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| Samples (156)
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GSM1350202, GSM1350203, GSM1350204, GSM1350205, GSM1350206, GSM1350207
GSM1350208, GSM1350209, GSM1350210, GSM1350211, GSM1350212, GSM1350213, GSM1350214, GSM1350215, GSM1350216, GSM1350217, GSM1350218, GSM1350219, GSM1350220, GSM1350221, GSM1350222, GSM1350223, GSM1350224, GSM1350225, GSM1350226, GSM1350227, GSM1350228, GSM1350229, GSM1350230, GSM1350231, GSM1350232, GSM1350233, GSM1350234, GSM1350235, GSM1350236, GSM1350237, GSM1350238, GSM1350239, GSM1350240, GSM1350241, GSM1350242, GSM1350243, GSM1350244, GSM1350245, GSM1350246, GSM1350247, GSM1350248, GSM1350249, GSM1350250, GSM1350251, GSM1350252, GSM1350253, GSM1350254, GSM1350255, GSM1350256, GSM1350257, GSM1350258, GSM1350259, GSM1350260, GSM1350261, GSM1350262, GSM1350263, GSM1350264, GSM1350265, GSM1350266, GSM1350267, GSM1350268, GSM1350269, GSM1350270, GSM1350271, GSM1350272, GSM1350273, GSM1350274, GSM1350275, GSM1350276, GSM1350277, GSM1350278, GSM1350279, GSM1350280, GSM1350281, GSM1350282, GSM1350283, GSM1350284, GSM1350285, GSM1350286, GSM1350287, GSM1350288, GSM1350289, GSM1350290, GSM1350291, GSM1350292, GSM1350293, GSM1350294, GSM1350295, GSM1350296, GSM1350297, GSM1350298, GSM1350299, GSM1350300, GSM1350301, GSM1350302, GSM1350303, GSM1350304, GSM1350305, GSM1350306, GSM1350307, GSM1350308, GSM1350309, GSM1350310, GSM1350311, GSM1350312, GSM1350313, GSM1350314, GSM1350315, GSM1350316, GSM1350317, GSM1350318, GSM1350319, GSM1350320, GSM1350321, GSM1350322, GSM1350323, GSM1350324, GSM1350325, GSM1350326, GSM1350327, GSM1350328, GSM1350329, GSM1350330, GSM1350331, GSM1350332, GSM1350333, GSM1350334, GSM1350335, GSM1350336, GSM1350337, GSM1350338, GSM1350339, GSM1350340, GSM1350341, GSM1350342, GSM1350343, GSM1350344, GSM1350345, GSM1350346, GSM1350347, GSM1350348, GSM2175130, GSM2175131, GSM2175132, GSM2175133, GSM2175134, GSM2175135, GSM8065597, GSM8065598, GSM8065599
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| Series (4)
|
| GSE56011 |
Exploring transcriptomic diversity in muscle revealed that cellular signaling pathways mainly differentiate five Western porcine breeds |
| GSE81755 |
Genome-wide DNA methylation and mRNA and the microRNA transcriptome profiling between oxidative and glycolytic skeletal muscles [array] |
| GSE81766 |
Genome-wide DNA methylation and mRNA and the microRNA transcriptome profiling between oxidative and glycolytic skeletal muscles |
| GSE255187 |
Oncopig and Human Bladder Cancer Cell Lines: Control vs Gemcitabine Treated |
|
| Data table header descriptions |
| ID |
ProbeName |
| accessions |
|
| ProbeName |
|
| GeneName |
|
| SystematicName |
|
| Description |
|
| GeneSymbol |
GeneSymbol |
| GB_ACC |
GenBank accession number of spotted sequence |
| SEQUENCE |
|
| SPOT_ID |
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| Data table |
| ID |
accessions |
ProbeName |
GeneName |
SystematicName |
Description |
GeneSymbol |
GB_ACC |
SEQUENCE |
SPOT_ID |
| 1 |
|
GE_BrightCorner |
GE_BrightCorner |
GE_BrightCorner |
|
|
|
|
CONTROL |
| 2 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 3 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 4 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 5 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 6 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 7 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 8 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 9 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 10 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
|
CONTROL |
| 11 |
|
DarkCorner |
DarkCorner |
DarkCorner |
|
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|
|
CONTROL |
| 12 |
ug|DY414640 |
A_72_P145331 |
DY414640 |
DY414640 |
1520699 MARC 3PIG Sus scrofa cDNA 3', mRNA sequence [DY414640] |
|
DY414640 |
TGTAATATCCACCTCAGAGCTTTGCTTCTCTGCCAACACTCGGAATAAAACTTTCAGCAG |
|
| 13 |
ug|CX060004 |
A_72_P331913 |
CX060004 |
CX060004 |
PDUts2041C12 Porcine testis cDNA library II Sus scrofa cDNA clone PDUts2041C12 5' similar to homologue to emb [CX060004] |
|
CX060004 |
AGCCTCCTACACATGAGAAGCGTGAGAGTGGTAAGAAAAGAGATAAAGAGTATGAAAGCG |
|
| 14 |
ug|AK233242 |
A_72_P286009 |
AK233242 |
AK233242 |
Sus scrofa mRNA, clone:LVRM10108H07, expressed in liver [AK233242] |
LOC100157055 |
AK233242 |
GTATTTGCCATTTTTTCTTGGGGGAAGGGGCAGTTGAAATAAATGTACTTTTATCATCAA |
|
| 15 |
ug|BX921952 |
A_72_P038861 |
BX921952 |
BX921952 |
BX921952 Sus Scrofa library (scan) Sus scrofa cDNA clone scan0013.p.18 5prim, mRNA sequence [BX921952] |
|
BX921952 |
AACACTTGACATAGCATGAAAACCTAGTACACTGGTGTTTAGTACCCAGAACCAATTTAC |
|
| 16 |
ug|AK232678|ug|AK230824|tc|TC271662|tc|TC262814 |
A_72_P358953 |
AK232678 |
AK232678 |
Sus scrofa mRNA, clone:LVRM10003F11, expressed in liver [AK232678] |
LOC100155352 |
AK232678 |
CAAAGTATTAATACAGAGAGCCTGTCTTTCGACCAAACAATAAACTAGAAAGAACCACAA |
|
| 17 |
ug|BX915099|tc|TC276636|tc|TC242484 |
A_72_P275954 |
BX915099 |
BX915099 |
BX915099 Sus Scrofa library (scan) Sus scrofa cDNA clone scan0027.p.15 5prim, mRNA sequence [BX915099] |
LOC100155815 |
XM_001927753 |
TAATGGAGTAGCTGTTGCCCTTCTCCGGTTGTGTGTACAGTATGTGTGGAATAAAAAAGG |
|
| 18 |
ug|AK234698|tc|TC258260|tc|TC261388 |
A_72_P383903 |
AK234698 |
AK234698 |
Sus scrofa mRNA, clone:OVRM10008H05, expressed in ovary [AK234698] |
|
AK234698 |
GTGGGGCTTTTGGAGCTGATGATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCA |
|
| 19 |
tc|TC270519 |
A_72_P297794 |
TC270519 |
TC270519 |
BC026036 CCAR1 protein {Homo sapiens} (exp=-1; wgp=0; cg=0), partial (21%) [TC270519] |
|
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TGGTAACAGCGACTGGTAATCCAGCTTTCAGCAGTATAGTTGATGTTCTTTTCTCTGTAA |
|
| 20 |
ug|DB818484 |
A_72_P412363 |
DB818484 |
DB818484 |
DB818484 full-length enriched swine cDNA library, adult thymus Sus scrofa cDNA 3', mRNA sequence [DB818484] |
|
DB818484 |
TATTTGGTGGCTGTCAAGCAAATTGGATACCTGGATGAACAAGACAAGCACATGACTTTC |
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Total number of rows: 45220
Table truncated, full table size 8297 Kbytes.
| Supplementary data files not provided |
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