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Platform GPL18732 Query DataSets for GPL18732
Status Public on May 28, 2014
Title Lactococcus lactis KCTC 3769T whole genome expression array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Lactococcus lactis
Manufacturer NimbleGen
Manufacture protocol NimbleGen Systems Inc.
 
Description Catalog Number: A4437-00-01, Design Name: 130108_T1272623_60mer_exp, Description: L. lactis KCTC 3769T, Accession Numbers: NC_002662, Genes: 2321, Probes/Transcript: 17, Probes: 4 x 72,000, Replicates: 5
Nimblegen Expression L. lactis KCTC 3769T 4X72K, Probe Length: 60mer, Number of Probes per, Target:6-17, Number of Replicate probe Sets per Array: 2-3, Feature Size: 16x16um, Array Size: 7.8x5.7mm, Slide size: 1x3 in.(25x76mm)
130108_T1272623_60mer_exp.ndf
130108_T1272623_60mer_exp.ndg
 
Submission date May 27, 2014
Last update date May 28, 2014
Contact name Maytiya Konkit
E-mail(s) minnybuzz@gmail.com
Organization name Chung-Ang University
Department Microbiology
Lab medical microbiology
Street address 84, Heukseok-ro, Dongjak-ku
City Seoul
ZIP/Postal code 156-756
Country South Korea
 
Samples (7) GSM1399383, GSM1399384, GSM1399385, GSM1399386, GSM1399387, GSM1399388 
Series (1)
GSE58002 Expression analysis of strains Lactococcus lactis KCTC 3769T, L. raffinolactis DSM 20443T, L. plantarum DSM 20686T, L. fujiensis JSM 16395T, L. garvieae KCTC 3772T, L. piscium DSM 6634T and L. chungangensis CAU 28T

Data table header descriptions
ID
ORF
GI
GeneID
ACCESSION
FUNCTION Entrez function number for the Gene name to which the indicated probe is directed.

Data table
ID ORF GI GeneID ACCESSION FUNCTION
TI272623S000001 L0274 15671983 1113599 NC_002662 chromosomal replication initiation protein
TI272623S000002 L0275 15671984 1113600 NC_002662 DNA polymerase III subunit beta
TI272623S000003 L0252 15671985 1113601 NC_002662 subunit B of ATP-dependent exonuclease
TI272623S000004 L0251 15671986 1113602 NC_002662 ATP-dependent exonuclease subunit a
TI272623S000005 L200000 30023968 1113603 NC_002662 hypothetical protein
TI272623S000006 L10283 15671987 1113604 NC_002662 transcription regulator
TI272623S000007 L0161 15671988 1113605 NC_002662 GTP-binding protein
TI272623S000008 L12334 15671989 1113606 NC_002662 transcription regulator
TI272623S000009 L12912 15671990 1113607 NC_002662 hypothetical protein
TI272623S000010 L13272 15671991 1113608 NC_002662 hypothetical protein
TI272623S000011 L15262 15671992 1113609 NC_002662 ABC transporter ATP-binding protein
TI272623S000012 L16101 15671993 1113610 NC_002662 hypothetical protein
TI272623S000013 L0365 15671994 1113611 NC_002662 peptidyl-tRNA hydrolase
TI272623S000014 L0263 15671995 1113612 NC_002662 transcription-repair coupling factor
TI272623S000015 L20795 15671996 1113613 NC_002662 hypothetical protein
TI272623S000016 L1001 15671997 1113614 NC_002662 hypothetical protein
TI272623S000019 L22496 15672000 1113617 NC_002662 hypothetical protein
TI272623S000020 L1002 15672001 1113618 NC_002662 MesJ
TI272623S000021 L25115 15672002 1113619 NC_002662 hypoxantine-guanine phosphorybosyltransferase
TI272623S000022 L0204 15672003 1113620 NC_002662 FtsH

Total number of rows: 1915

Table truncated, full table size 141 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL18732_130108_TI272623_60mer_exp.ndf.gz 40.2 Mb (ftp)(http) NDF
GPL18732_130108_TI272623_60mer_exp.ngd.gz 119.5 Kb (ftp)(http) NGD

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