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Status
Public on Nov 29, 2016
Title
Agilent-028889 Tursiops truncatus AM_v1 [Probe name version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Tursiops truncatus
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16028889 or 2528889. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
Submission date
Jun 13, 2014
Last update date
Jun 13, 2014
Contact name
Marion Neely
E-mail(s)
marion.neely@gmail.com
Organization name
National Ocean Services
Department
NCCOS
Lab
Marine Genomics Core Facility
Street address
331 Ft. Johnson Rd
City
Charleston
State/province
SC
ZIP/Postal code
29412
Country
USA
Samples (94)
GSM1412123 , GSM1412124 , GSM1412125 , GSM1412126 , GSM1412127 , GSM1412128
GSM1412129 ,
GSM1412130 ,
GSM1412131 ,
GSM1412132 ,
GSM1412133 ,
GSM1412134 ,
GSM1412135 ,
GSM1412136 ,
GSM1412137 ,
GSM1412138 ,
GSM1412139 ,
GSM1412140 ,
GSM1412141 ,
GSM1412142 ,
GSM1412143 ,
GSM1412144 ,
GSM1412145 ,
GSM1412146 ,
GSM1412147 ,
GSM1412148 ,
GSM1412149 ,
GSM1412150 ,
GSM1412151 ,
GSM1412152 ,
GSM1412153 ,
GSM1412154 ,
GSM1412155 ,
GSM1412156 ,
GSM1412157 ,
GSM1412158 ,
GSM1412159 ,
GSM1412160 ,
GSM1412161 ,
GSM1412162 ,
GSM1412163 ,
GSM1412164 ,
GSM1412165 ,
GSM1412166 ,
GSM1412167 ,
GSM1412168 ,
GSM1412169 ,
GSM1412170 ,
GSM1412171 ,
GSM1412172 ,
GSM1412173 ,
GSM1412174 ,
GSM1412175 ,
GSM1412176 ,
GSM1412177 ,
GSM1412178 ,
GSM1412179 ,
GSM1412180 ,
GSM1412181 ,
GSM1412182 ,
GSM1412183 ,
GSM1412184 ,
GSM1412185 ,
GSM1412186 ,
GSM1412187 ,
GSM1412188 ,
GSM1412189 ,
GSM1412190 ,
GSM1412191 ,
GSM1412192 ,
GSM1412193 ,
GSM1412194 ,
GSM1412195 ,
GSM1412196 ,
GSM1412197 ,
GSM1412198 ,
GSM1412199 ,
GSM1412200 ,
GSM1412201 ,
GSM1412202 ,
GSM1412203 ,
GSM1412204 ,
GSM1412205 ,
GSM1412206 ,
GSM1412207 ,
GSM1412208 ,
GSM1412209 ,
GSM1412210 ,
GSM1412211 ,
GSM1412212 ,
GSM1412213 ,
GSM1412214 ,
GSM1412215 ,
GSM1412216
Series (1)
GSE58471
Seasonal Variation in the Skin Transcriptome of Bottlenose Dolphins (Tursiops truncatus)
Data table header descriptions
ID
Probe Name
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
GENE_SYMBOL
Gene Symbol
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
DESCRIPTION
Description
Data table
ID
SPOT_ID
CONTROL_TYPE
GENE_SYMBOL
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
GE_BrightCorner
GE_BrightCorner
pos
DarkCorner
DarkCorner
pos
AM-15709
AM-15709
FALSE
Contig-c12730-1
chr1:0-60
gi-51822906-gb-CO892606-1- BovGen-20931 normal cattle brain Bos taurus cDNA clone RZPDp1056B2047Q 5' mRNA sequence-
AM-15201
AM-15201
FALSE
Contig-c12221-2
chr1:0-60
gi-34167731-gb-CF365293-1- 835911 MARC 3PIG Sus scrofa cDNA 3' mRNA sequence- DHB13-HUMAN 17-beta hydroxysteroid dehydrogenase 13 OS-Homo sapiens GN-HSD17B13 PE-2 SV-1
AM-29776
AM-29776
FALSE
SRR027949.203313
chr1:0-60
gi-50682818-gb-CO713123-1- DG14-1k18 DG14-muscle Canis lupus familiaris cDNA 3' mRNA sequence-
AM-18027
AM-18027
FALSE
Contig-c15057-1
chr1:0-60
gi-182513624-gb-EW281901-2- rjca08c-k7-y1 jca Sus scrofa cDNA 5' mRNA sequence-
AM-12015
AM-12015
FALSE
Contig-c9301-1
chr1:0-60
gi-42732372-gb-CK776122-1- 967266 MARC 3BOV Bos taurus cDNA 3' mRNA sequence-
AM-7057
AM-7057
FALSE
Contig-c4728-1
chr1:0-60
gi-288277077-dbj-FS683856-1- FS683856 full-length enriched swine cDNA library adult longissimus Sus scrofa cDNA clone MLTL10072F05 5' mRNA sequence- NEBU-HUMAN Nebulin OS-Homo sapiens GN-NEB PE-1 SV-3
AM-6753
AM-6753
FALSE
Contig-c4505-1
chr1:0-60
AM-7985
AM-7985
FALSE
Contig-c5490-1
chr1:0-60
gi-148274722-gb-ES557465-1- est-e-glacialis672 RightWhaleSkin Eubalaena glacialis cDNA mRNA sequence- NP1L1-PONAB Nucleosome assembly protein 1-like 1 OS-Pongo abelii GN-NAP1L1 PE-2 SV-1
AM-15194
AM-15194
FALSE
Contig-c12215-1
chr1:0-60
gi-60442160-gb-DN273550-1- 1152461 MARC 7BOV Bos taurus cDNA 3' mRNA sequence-
AM-23725
AM-23725
FALSE
Contig-c20846-1
chr1:0-60
AM-18907
AM-18907
FALSE
Contig-c15957-1
chr1:0-60
AM-18817
AM-18817
FALSE
Contig-c15866-1
chr1:0-60
AM-5437
AM-5437
FALSE
Contig-c3285-1
chr1:0-60
gi-40837863-gb-CK466586-1- 937808 MARC 4PIG Sus scrofa cDNA 5' mRNA sequence- CD2AP-HUMAN CD2-associated protein OS-Homo sapiens GN-CD2AP PE-1 SV-1
AM-19369
AM-19369
FALSE
Contig-c16439-1
chr1:0-60
gi-57710464-gb-CX598718-1- CT020021B10H12 Equine Articular Cartilage cDNA Library Equus caballus cDNA clone CT020021B10H12 mRNA sequence- CACO2-MACFA Calcium-binding and coiled-coil domain-containing protein 2 OS-Macaca fascicularis GN-CALCOCO2 PE-2 SV-1
AM-13003
AM-13003
FALSE
Contig-c10158-1
chr1:0-60
gi-167694605-gb-FE026624-1- C0009261H10-Q1KBM13R KN511 Ovis aries rectum and large colon from E- coli challenged and unchallenged animals Ovis aries cDNA clone C0009261H10 3' mRNA sequence-
AM-12693
AM-12693
FALSE
Contig-c9940-1
chr1:0-60
gi-40385594-dbj-BP138185-1- BP138185 full-length enriched swine cDNA library adult liver Sus scrofa cDNA clone LVRM10001B07 5' mRNA sequence- PRDX6-BOVIN Peroxiredoxin-6 OS-Bos taurus GN-PRDX6 PE-1 SV-3
AM-613
AM-613
FALSE
Contig-c377-1
chr1:0-60
gi-59786274-gb-DN109345-1- 1106920 MARC 4PIG Sus scrofa cDNA 5' mRNA sequence-
AM-26524
AM-26524
FALSE
Contig-c23705-1
chr1:0-60
gi-51885465-emb-AJ817989-1- AJ817989 KN206 Bos sp- cDNA clone C0006007n12 mRNA sequence-
Total number of rows: 24478 Table truncated, full table size 3763 Kbytes .
Supplementary data files not provided