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Status
Public on Feb 24, 2015
Title
KU_Wheat_Genome_135K array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Triticum aestivum
Manufacturer
NimbleGen
Manufacture protocol
High-density DNA array. See manufacturer's website at http://www.nimblegen.com/.
Description
MATA135K. 52,589 probes. 60-mer probe pairs. The probes were designed with a Tm value ranging between 75 to 85°C. Random GC probes for monitoring the hybridization efficiency and four corner fiducial controls were included to assist with overlaying the grid on the image.
Citation(s)
25747040
Submission date
Jun 19, 2014
Last update date
Mar 17, 2015
Contact name
Tong Geon Lee
E-mail(s)
agrospel@illinois.edu
Organization name
University of Illinois
Street address
1101 W Peabody
City
Urbana
State/province
IL
ZIP/Postal code
61801
Country
USA
Samples (12)
GSM1416760 , GSM1416761 , GSM1416762 , GSM1416763 , GSM1416764 , GSM1416765
Series (1)
GSE58678
Expression analysis of individual homoeologous wheat genome- and rye genome-specific transcripts in a 2BS.2RL wheat-rye translocation
Data table header descriptions
ID
SPOT_ID
Data table
ID
SPOT_ID
Aspeltoides_ESTC000001
Aspeltoides_ESTC000001
Aspeltoides_ESTC000002
Aspeltoides_ESTC000002
Aspeltoides_ESTC000003
Aspeltoides_ESTC000003
Aspeltoides_ESTC000004
Aspeltoides_ESTC000004
Aspeltoides_ESTC000005
Aspeltoides_ESTC000005
Aspeltoides_ESTC000006
Aspeltoides_ESTC000006
Aspeltoides_ESTC000007
Aspeltoides_ESTC000007
Aspeltoides_ESTC000008
Aspeltoides_ESTC000008
Aspeltoides_ESTC000009
Aspeltoides_ESTC000009
Aspeltoides_ESTC000010
Aspeltoides_ESTC000010
Aspeltoides_ESTC000011
Aspeltoides_ESTC000011
Aspeltoides_ESTC000012
Aspeltoides_ESTC000012
Aspeltoides_ESTC000013
Aspeltoides_ESTC000013
Aspeltoides_ESTC000014
Aspeltoides_ESTC000014
Aspeltoides_ESTC000015
Aspeltoides_ESTC000015
Aspeltoides_ESTC000016
Aspeltoides_ESTC000016
Aspeltoides_ESTC000017
Aspeltoides_ESTC000017
Aspeltoides_ESTC000018
Aspeltoides_ESTC000018
Aspeltoides_ESTC000019
Aspeltoides_ESTC000019
Aspeltoides_ESTC000020
Aspeltoides_ESTC000020
Total number of rows: 65459 Table truncated, full table size 2846 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL18847_KU_probe.txt.gz
2.5 Mb
(ftp) (http)
TXT