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Platform GPL19666 Query DataSets for GPL19666
Status Public on Jan 04, 2016
Title Agilent-059612 Custom Duck Gene Expression 8X60k (AMADID: G4102A_059612)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Anas platyrhynchos
Manufacturer Agilent Technologies
Manufacture protocol www.chem.agilent.com
 
Description designed by Genotypic Technology Private Limited , Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0442)
 
Submission date Jan 20, 2015
Last update date Jan 04, 2016
Contact name Genotypic technology
E-mail(s) sudha.rao@genotypic.co.in
Organization name Genotypic Technology
Street address 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
City Bangalore
State/province Karnataka
ZIP/Postal code 560094
Country India
 
Samples (8) GSM1590370, GSM1590371, GSM1590372, GSM1590373, GSM1590374, GSM1590375 
Series (1)
GSE65230 Genome wide host gene expression analysis in duck lungs infected with highly or low pathogenic H5N1 avian influenza virus

Data table header descriptions
ID
ORF gene name
Description Gene Description
Sequence Oligonucleotide Probe sequence
Accession ID
Strand
GeneID

Data table
ID ORF Description Sequence Accession ID Strand GeneID
GT_Duck_Spf_NW_004677663.1:174333-274530_113797 LOC101795986 acid-sensing ion channel 2-like[Anas platyrhynchos]; AAACAAAAAGTCGCAGCTCTTGGATTCTTCTTACGTTCTTGTCCTTCGTGTCAGTCTGTG ref|NW_004677663.1 + 101795986
GT_Duck_Spf_NW_004676645.1:425797-438786_39721 LOC101803956 synaptotagmin-5-like[Anas platyrhynchos]; AAACAAAAATCATACCTTCAGAAATGGCTTAAAAGCGGGTCTCTGGGAGCCCTCTGAGAG ref|NW_004676645.1 - 101803956
GT_Duck_Spf_NW_004677525.1:1142295-1145418_107397 LOC101803581 protein crumbs homolog 1-like[Anas platyrhynchos]; AAACAAAAATGAGTTGGCCTAAGACCGAAATGCTGCAACAGTTCCATGACTGTGAAAGGA ref|NW_004677525.1 - 101803581
GT_Duck_Spf_NW_004678318.1:49003-55730_134616 LOC101792983 ubiquitin carboxyl-terminal hydrolase CYLD-like[Anas platyrhynchos]; AAACAAAACAAAAAGCACGTCAGGAGAGACAGGAAGGTGACGCTTAGTGACAACTACCTC ref|NW_004678318.1 - 101792983
GT_Duck_Xhyb_NW_004677184.1:47375-48209_87661 LOC101791053 cytochrome c oxidase assembly protein COX14 homolog[Anas platyrhynchos];Next Best hit-NW_004677184.1:47375-48209,NW_004677184.1:34490-47866 AAACAAAACGCTTCAGAACCGCGCCTCGCCTTAAATAAACCCAAAAAGTCCTTCAGAAAA ref|NW_004677184.1 - 101791053
GT_Duck_Spf_DR764642_17455 109970606 DR764642 duckAP26_1E9 Duck spleen ZAP Express cDNA Library Anas platyrhynchos cDNA clone duckAP26_1E9 5' similar to (Q6P1X7) C14orf173 protein (Fragment), mRNA sequence AAACAAAACTAGGTTGTGTGGTACAATGAGGCGTCACGGCAAGGCAGAAGAAATAACGGA ref|DR764642
GT_Duck_Spf_NW_004678054.1:585895-594441_127116 LOC101802639 chromosome unknown open reading frame, human C1orf123[Anas platyrhynchos]; AAACAAAACTTTTAAGCTCACCCCACTGAAATTGACATTTAATGCCAGACGCCCCGCTGT ref|NW_004678054.1 - 101802639
GT_Duck_Spf_NW_004678121.1:85112-113769_129439 BTBD10 BTB (POZ) domain containing 10 [Source:HGNC Symbol;Acc:21445] AAACAAAAGATGACAGTCCAAAGGCTACTTTGGAAAAGCCAGGTTTTGAGCAGGTAGTTG ref|NW_004678121.1 - 101797674
GT_Duck_Spf_NW_004677175.1:806330-856448_87421 CREB3L2 cAMP responsive element binding protein 3-like 2 [Source:HGNC Symbol;Acc:23720] AAACAAAAGCACTTTCCCTCGCAGCGCTGTGATTTAATTAATTGCCTGTATCGAGCGAGC ref|NW_004677175.1 - 101792907
GT_Duck_Spf_NW_004680985.1:54966-70845_154623 RHOV ras homolog family member V [Source:HGNC Symbol;Acc:18313] AAACAAAAGCCTGCGAACATCTCTCACAACTGTCTCTTTTTGTGACACAGCTCGTGTAGC ref|NW_004680985.1 + 101805428
GT_Duck_Spf_NW_004679221.1:46656-47954_148131 PHF13 PHD finger protein 13 [Source:HGNC Symbol;Acc:22983] AAACAAAATAACTCCCGGTGTAGCTGAAAGATCTGTCAGGAGTCAGAGACGTAACTCGCT ref|NW_004679221.1 + 101789932
GT_Duck_Xhyb_DR764467_54995 109970284 DR764467 duckAP26_18D6 Duck spleen ZAP Express cDNA Library Anas platyrhynchos cDNA clone duckAP26_18D6 5' similar to (Q90705) Elongation factor 2 (EF-2), mRNA sequence; Next best hit :DR764467,NW_004676931.1:192575-202707,NW_004676768.1:723033-812143 AAACAAACAAAACTAACTAGCGTAACACCACCAGTGCAGCAAGGCAAAATGGGTAGACTT ref|DR764467
GT_Duck_Spf_NW_004678240.1:82487-95635_132466 GMEB2 glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:4371] AAACAAACAAACAAAAAACATTGGTTTAGTTCCTGGTGTCCTACTGGGACCCCAGTCGGG ref|NW_004678240.1 - 101804962
GT_Duck_Spf_NW_004676586.1:69734-107971_32971 HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:HGNC Symbol;Acc:5302] AAACAAACAAACAGGAGCATCGCTTTGAAGTAGCTGCTTTTGTGGCAGGGATTCCTGGAA ref|NW_004676586.1 - 101799166
GT_Duck_Xhyb_NW_004679913.1:64699-67785_151341 LOC101791883 COUP transcription factor 1-like[Anas platyrhynchos];Next Best hit-NW_004679913.1:64699-67785,NW_004678008.1:656-13613 AAACAAACAACGGTAAAAATTACACAGTTTCAGCCAGTTCCTTACAAAATCTCGCCCCCA ref|NW_004679913.1 + 101791883
GT_Duck_Spf_NW_004677175.1:1630630-1664097_87273 AKR1D1 aldo-keto reductase family 1, member D1 [Source:HGNC Symbol;Acc:388] AAACAAACACAAAAGCGCTGCTGAAAGATCAGTCTGCTTAGGAGAACGAAAGGTAGCTGC ref|NW_004677175.1 - 101802488
GT_Duck_Spf_NW_004676544.1:45459-116878_28451 PUM2 pumilio homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:14958] AAACAAACAGGCTACCTACCGAATGATATACATGAATGCTATCTCCTATGGGCCAGCAGC ref|NW_004676544.1 - 101804988
GT_Duck_Xhyb_JK311522_10322 528076371 JK311522 duck311_HP-SSHFS4.240 H5N1 A/Vietnam/1203/04-infected duck lung suppressive subtractive hybridization (SSH) cDNA library Anas platyrhynchos cDNA clone duck311_HP-SSHFS4.240 similar to similar to (Q8QGE7) heat shock protein 90 alpha, mRNA sequence; Next best hit :DR766376,DR765130,JK311895,JK311522,JK311341,JK311666,JK311411,NW_004677112.1:686846-693652,JK311865,JK311687 AAACAAACATGATCGTACTCTGACCATTGTGGATACAGGCATAGGGATGACCAAAGCTGA ref|JK311522
GT_Duck_Xhyb_JK311895_10512 528076744 JK311895 duck311_HP-SSHFS4.679 H5N1 A/Vietnam/1203/04-infected duck lung suppressive subtractive hybridization (SSH) cDNA library Anas platyrhynchos cDNA clone duck311_HP-SSHFS4.679 similar to similar to (Q8QGE7) heat shock protein 90 alpha, mRNA sequence; Next best hit :DR766376,DR765130,JK311895,JK311522,JK311341,JK311666,JK311411,NW_004677112.1:686846-693652,JK311865,JK311687 AAACAAACATGATCGTACTCTGACCATTGTGGATACAGGCATAGGGATGACCAAAGCTGA ref|JK311895
GT_Duck_Spf_JG771165_63848 328679855 JG771165 3-51_M13F(-47) Duck large white follicle library Anas platyrhynchos cDNA, mRNA sequence AAACAAACCCCCAAAGTGCGACTGTTGGGAGGACCGCCCCAAATAGAGGAAGAGCATGTG ref|JG771165

Total number of rows: 61657

Table truncated, full table size 19650 Kbytes.




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