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Platform GPL19700 Query DataSets for GPL19700
Status Public on Feb 28, 2015
Title PEPperCHIP Autoimmunity Microarray
Technology type spotted peptide or protein
Distribution custom-commercial
Organisms Klebsiella pneumoniae; Proteus mirabilis; Mycobacterium tuberculosis; Homo sapiens; Human alphaherpesvirus 2; human gammaherpesvirus 4; Caprine arthritis encephalitis virus; Human endogenous retrovirus K; Torque teno virus
Manufacturer PEPperPRINT
Manufacture protocol Amino acid microparticles are laser printed onto a glass slide with a custom 24-color laser printer. One layer of an amino acid particle pattern is printed on a coated glass slide. A heating step melts the particles. Embedded amino acids can couple to the chip surface. In accordance with solid phase Fmoc chemistry, a cycle of synthesis is completed after removal of excessive material by washing and cleavage of the N-terminal Fmoc protection group. The cycle is repeated until the full peptide microarray is synthesized.
 
Description Laser printer spotted peptides
All source information for each peptide is available on the Immune Epitope Database (http://www.iedb.org/).
 
Submission date Jan 26, 2015
Last update date Feb 28, 2015
Contact name Jennie Hamilton
Organization name University of Alabama Birmingham
Department Department of Medicine, Division of Clinical Immunology and Rheumatology
Street address 1825 University Blvd.
City Birmingham
State/province AL
ZIP/Postal code 35294
Country USA
 
Samples (1) GSM1591569
Series (2)
GSE65276 Autoimmune peptide antigen reactivity in BXD2 mice with spontaneous systemic autoimmune disease
GSE65290 General Approach for Tetramer Based Identification of Autoantigen Reactive B Cells: Characterization of La and snRNP Reactive B Cells in Autoimmune BXD2 Mice

Data table header descriptions
ID
SEQUENCE Peptide amino acid sequence
Source Molecule Name Peptide source molecule
Source Organism ID Peptide source taxon identifier ID
Source Organism Name Peptide source organism

Data table
ID SEQUENCE Source Molecule Name Source Organism ID Source Organism Name
ALLRCIPALDSLTPANE ALLRCIPALDSLTPANE 65 kDa heat shock protein 9606 Homo sapiens
LLRVIPALDSLTPANED LLRVIPALDSLTPANED 60 kDa heat shock protein 9606 Homo sapiens
LRCIPALDSLTPANEDC LRCIPALDSLTPANEDC 65 kDa heat shock protein 9606 Homo sapiens
SHRSERERRRDRDRDRD SHRSERERRRDRDRDRD U1 small nuclear ribonucleoprotein 70 kDa 9606 Homo sapiens
KEEEQKWKWWEEERY KEEEQKWKWWEEERY DNA topoisomerase 1 9606 Homo sapiens
RERRRDRDRDRDRDREH RERRRDRDRDRDRDREH U1 small nuclear ribonucleoprotein 70 kDa 9606 Homo sapiens
PQRRGGDNHGRGRGRGR PQRRGGDNHGRGRGRGR EBNA-1 protein 10376 Human herpesvirus 4
WWARRRRRWRRWKRR WWARRRRRWRRWKRR ORF1 68887 Torque teno virus
EGMRFDKGYISGYFV EGMRFDKGYISGYFV 60 kDa chaperonin 2 1773 Mycobacterium tuberculosis
LQELEKDEREQ LQELEKDEREQ 52 kDa Ro protein 9606 Homo sapiens
RDRDRDRE RDRDRDRE U1 small nuclear ribonucleoprotein 70 kDa 9606 Homo sapiens
RLREKLQEEMLQREEAE RLREKLQEEMLQREEAE Vimentin 9606 Homo sapiens
RGRGRGRGRGRGR RGRGRGRGRGRGR Small nuclear ribonucleoprotein Sm D1 9606 Homo sapiens
CNSRQTDREDELI CNSRQTDREDELI Nitrogenase iron protein 573 Klebsiella pneumoniae
PPPGRRP PPPGRRP EBNA-1 protein 10376 Human herpesvirus 4
RDRDRDRDRDR RDRDRDRDRDR U1 small nuclear ribonucleoprotein 70 kDa 9606 Homo sapiens
RERRRSHRSERERRRDR RERRRSHRSERERRRDR U1 small nuclear ribonucleoprotein 70 kDa 9606 Homo sapiens
KGNQYWRFEDGVLDPDY KGNQYWRFEDGVLDPDY Unnamed protein product 9606 Homo sapiens
LYMEHNNVYTVPDSYFZ LYMEHNNVYTVPDSYFZ Fibromodulin citrulinated-RA 9606 Homo sapiens
MGCSSPPCECHQEEDFR MGCSSPPCECHQEEDFR Thyrotropin receptor 9606 Homo sapiens

Total number of rows: 3830

Table truncated, full table size 150 Kbytes.




Download family Format
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Supplementary data files not provided

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