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GEO accession:
Platform GPL19890
Query DataSets for GPL19890
Status
Public on Jun 21, 2015
Title
Bacillus subtilis gene-level annotation representing two designs (090325_CBS_DTU_Bsub_T2; 110831_CBS_DTU_Bsub_T2)
Technology type
in situ oligonucleotide
Distribution
non-commercial
Organism
Bacillus subtilis subsp. subtilis str. 168
Manufacturer
NimbleGen
Manufacture protocol
See manufacturer website
Description
Virtual platform based on two NimbleGen designs:
090325_CBS_DTU_Bsub_T2
110831_CBS_DTU_Bsub_T2
Citation(s)
25915524
Submission date
Mar 13, 2015
Last update date
Jun 23, 2015
Contact name
Tatiana Rochat
E-mail(s)
tatiana.rochat@jouy.inra.fr
Organization name
INRA
Lab
Virologie et Immunologie Moléculaires
Street address
Domaine de Vilvert
City
Jouy-en-Josas
ZIP/Postal code
78350
Country
France
Samples (11)
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GSM1633840
,
GSM1633841
,
GSM1633842
,
GSM1633843
,
GSM1890637
,
GSM1890638
GSM1890639
,
GSM1890640
,
GSM1890641
,
GSM1890642
,
GSM1890643
Series (3)
GSE66891
Tracking the elusive function of Bacillus subtilis Hfq (NimbleGen)
GSE66893
Tracking the elusive function of Bacillus subtilis Hfq
GSE73315
Constitutive stringent response restores viability of Bacillus subtilis lacking Structural Maintenance of Chromosome protein
Data table header descriptions
ID
GeneSymbol
SPOT_ID
ORF
Locus Tag
Data table
ID
GeneSymbol
SPOT_ID
ORF
new_1_148
S1
new_1_148
new_24_297_c
S2
new_24_297_c
new_150_409
S3
new_150_409
new_299_1067_c
S4
new_299_1067_c
BSU00010
dnaA
BSU00010
BSU00010
new_1751_1938
S5
new_1751_1938
BSU00020
dnaN
BSU00020
BSU00020
BSU00030
yaaA
BSU00030
BSU00030
BSU00040
recF
BSU00040
BSU00040
BSU00050
yaaB
BSU00050
BSU00050
BSU00060
gyrB
BSU00060
BSU00060
new_6784_6993
S6
new_6784_6993
BSU00070
gyrA
BSU00070
BSU00070
new_9529_9614
S7
new_9529_9614
new_14811_15868
S8
new_14811_15868
BSU00080
yaaC
BSU00080
BSU00080
BSU00090
guaB
BSU00090
BSU00090
new_17238_17833_c
S9
new_17238_17833_c
new_17453_17533
S10
new_17453_17533
BSU00100
dacA
BSU00100
BSU00100
Total number of rows:
5875
Table truncated, full table size
207 Kbytes
.
Download family
Format
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Supplementary file
Size
Download
File type/resource
GPL19890_090325_CBS_DTU_Bsub_T2.ndf.gz
21.9 Mb
(ftp)
(http)
NDF
GPL19890_090325_CBS_DTU_Bsub_T2.pos.gz
5.1 Mb
(ftp)
(http)
POS
GPL19890_110831_CBS_DTU_Bsub_T2.ndf.gz
38.0 Mb
(ftp)
(http)
NDF
GPL19890_110831_CBS_DTU_Bsub_T2.pos.gz
6.1 Mb
(ftp)
(http)
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