GEO help: Mouse over screen elements for information.
Status
Public on Apr 24, 2015
Title
[HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [CDF: hugene20st_Hs_ENTREZG.cdf, Brainarray version 19.0.0]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's web site.
Description
This array is identical to GPL16686 but the data were analyzed with a custom CDF environment.
Web link
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/19.0.0/entrezg.asp Submission date
Apr 23, 2015
Last update date
May 26, 2016
Contact name
GEO admin
E-mail(s)
geo@ncbi.nlm.nih.gov Organization name
NCBI/NLM/NIH
Street address
9000 Rockville Pike
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (248)
GSM1665813 , GSM1665814 , GSM1665815 , GSM1665816 , GSM1892585 , GSM1892586
GSM1892587 ,
GSM1892588 ,
GSM1892589 ,
GSM1892590 ,
GSM2178894 ,
GSM2178895 ,
GSM2178896 ,
GSM2178897 ,
GSM2178898 ,
GSM2178899 ,
GSM2178900 ,
GSM2178901 ,
GSM2178902 ,
GSM2178903 ,
GSM2178904 ,
GSM2178905 ,
GSM2178906 ,
GSM2178907 ,
GSM2178908 ,
GSM2178909 ,
GSM2178910 ,
GSM2178911 ,
GSM2178912 ,
GSM2178913 ,
GSM2178914 ,
GSM2178915 ,
GSM2178916 ,
GSM2178917 ,
GSM2178918 ,
GSM2178919 ,
GSM2178920 ,
GSM2178921 ,
GSM2178922 ,
GSM2178923 ,
GSM2178924 ,
GSM2178925 ,
GSM2178926 ,
GSM2178927 ,
GSM2178928 ,
GSM2178929 ,
GSM2178930 ,
GSM2178931 ,
GSM2178932 ,
GSM2178933 ,
GSM2178934 ,
GSM2178935 ,
GSM2178936 ,
GSM2178937 ,
GSM2178938 ,
GSM2178939 ,
GSM2178940 ,
GSM2178941 ,
GSM2178942 ,
GSM2178943 ,
GSM2178944 ,
GSM2178945 ,
GSM2178946 ,
GSM2178947 ,
GSM2178948 ,
GSM2178949 ,
GSM2178950 ,
GSM2178951 ,
GSM2178952 ,
GSM2178953 ,
GSM2178954 ,
GSM2178955 ,
GSM2178956 ,
GSM2178957 ,
GSM2178958 ,
GSM2178959 ,
GSM2409634 ,
GSM2409635 ,
GSM2409636 ,
GSM2409637 ,
GSM2409638 ,
GSM2409639 ,
GSM2498221 ,
GSM2498222 ,
GSM2498223 ,
GSM2498224 ,
GSM2692008 ,
GSM2692009 ,
GSM2692010 ,
GSM2692011 ,
GSM2692012 ,
GSM2692013 ,
GSM2791598 ,
GSM2791599 ,
GSM2791600 ,
GSM2791601 ,
GSM2791602 ,
GSM2791603 ,
GSM2791604 ,
GSM2791605 ,
GSM3324104 ,
GSM3324105 ,
GSM3324106 ,
GSM3324107 ,
GSM3324108 ,
GSM3324109 ,
GSM3324110 ,
GSM3324111 ,
GSM3324112 ,
GSM3324113 ,
GSM3324114 ,
GSM3324115 ,
GSM3324116 ,
GSM3324117 ,
GSM3324118 ,
GSM3324119 ,
GSM3324120 ,
GSM3324121 ,
GSM3324122 ,
GSM3324123 ,
GSM3324124 ,
GSM3324125 ,
GSM3324126 ,
GSM3324127 ,
GSM3324128 ,
GSM3324129 ,
GSM3324130 ,
GSM3324131 ,
GSM3324132 ,
GSM3324133 ,
GSM3324134 ,
GSM3324135 ,
GSM3324136 ,
GSM3324137 ,
GSM3324138 ,
GSM3324139 ,
GSM3324140 ,
GSM3324141 ,
GSM3324142 ,
GSM3324143 ,
GSM3324144 ,
GSM3324145 ,
GSM3324146 ,
GSM3324147 ,
GSM3324148 ,
GSM3324149 ,
GSM3324150 ,
GSM3324151 ,
GSM3324152 ,
GSM3324153 ,
GSM3324154 ,
GSM3324155 ,
GSM3324156 ,
GSM3324157 ,
GSM3324158 ,
GSM3324159 ,
GSM3324160 ,
GSM3324161 ,
GSM3324162 ,
GSM3324163 ,
GSM3324164 ,
GSM3324165 ,
GSM3324166 ,
GSM3324167 ,
GSM3324168 ,
GSM3324169 ,
GSM3324170 ,
GSM3324171 ,
GSM3324172 ,
GSM3324173 ,
GSM3324174 ,
GSM3324175 ,
GSM3324176 ,
GSM3324177 ,
GSM3324178 ,
GSM3324179 ,
GSM3324180 ,
GSM3324181 ,
GSM3324182 ,
GSM3324183 ,
GSM3324184 ,
GSM3324185 ,
GSM3324186 ,
GSM3324187 ,
GSM3324188 ,
GSM3324189 ,
GSM3324190 ,
GSM3324191 ,
GSM3324192 ,
GSM3324193 ,
GSM3444835 ,
GSM3444836 ,
GSM3444837 ,
GSM3444838 ,
GSM3444839 ,
GSM3444840 ,
GSM3444841 ,
GSM3444842 ,
GSM3444843 ,
GSM4094296 ,
GSM4094297 ,
GSM4094298 ,
GSM4094299 ,
GSM4094300 ,
GSM4094301 ,
GSM4094302 ,
GSM4094303 ,
GSM4094304 ,
GSM4094305 ,
GSM5244283 ,
GSM5244284 ,
GSM5244285 ,
GSM5244286 ,
GSM5244287 ,
GSM5244288 ,
GSM5244289 ,
GSM5244290 ,
GSM5244291 ,
GSM5244292 ,
GSM5244293 ,
GSM5244294 ,
GSM5244295 ,
GSM5244296 ,
GSM5244297 ,
GSM5244298 ,
GSM5244299 ,
GSM5244300 ,
GSM5244301 ,
GSM5244302 ,
GSM5244303 ,
GSM5244304 ,
GSM5244305 ,
GSM5244306 ,
GSM5244307 ,
GSM5244308 ,
GSM5244309 ,
GSM5244310 ,
GSM5244311 ,
GSM5244312 ,
GSM5244313 ,
GSM5244314 ,
GSM5244315 ,
GSM5244316 ,
GSM5244317 ,
GSM5244318 ,
GSM5244319 ,
GSM5244320 ,
GSM5244321 Series (12)
GSE68209 Expression data from MOLM-14 human acute myeloid leukemia cell line after AMPK activation by GSK621 according to mTORC1 activation level
GSE73396 Impact of Verteporfin on HCC cells
GSE81970 Expression data in Human rectal mucosa before and after an dietary intervention with casein, soy protein or maltodextrin
GSE90628 Expression data from human infant kidney derived-CD133+GFP+ and CD133-GFP+
GSE95172 Expression data from MOLM-14 human acute myeloid leukemia cell line after mTORC1 inhibition by rapamycin
GSE100718 Gene expression in human (h)T-ALL isolated from NSG mice as a function of the bone marrow microenvironment
GSE104195 Expression data from SOX9 overexpressing EndoC-ßH1 cells
GSE104196 Viral like infection induces Human β cell dedifferentiation
GSE118280 Effects of temporal segmentation of meal composition on human adipose tissue transcriptome
GSE121732 Inhibition of YAP in human HCC cells
GSE137915 YAP and/or TAZ inhibition in HepG2 cells
GSE172222 Ischemia Reperfusion of Lung Transplant Setting Differentially Regulates Transcriptomic Profiles between Human Lung Endothelial and Epithelial Cells
Relations Alternative to
GPL16686 (Alternative CDF [official])
Data table header descriptions ID ENTREZ_GENE_ID Entrez Gene ID
Symbol LocusTag Synonyms dbXrefs Chromosome Map_location Description Type_of_gene Symbol_from_nomenclature_authority Full_name_from_nomenclature_authority Nomenclature_status Other_designations SPOT_ID
Data table ID ENTREZ_GENE_ID Symbol LocusTag Synonyms dbXrefs Chromosome Map_location Description Type_of_gene Symbol_from_nomenclature_authority Full_name_from_nomenclature_authority Nomenclature_status Other_designations SPOT_ID 1_at
1 A1BG
-
A1B|ABG|GAB|HYST2477
MIM:138670|HGNC:HGNC:5|Ensembl:ENSG00000121410|HPRD:00726|Vega:OTTHUMG00000183507
19
19q13.4
alpha-1-B glycoprotein
protein-coding
A1BG
alpha-1-B glycoprotein
O
HEL-S-163pA|alpha-1B-glycoprotein|epididymis secretory sperm binding protein Li 163pA
1_at
2_at
2 A2M
-
A2MD|CPAMD5|FWP007|S863-7
MIM:103950|HGNC:HGNC:7|Ensembl:ENSG00000175899|HPRD:00072|Vega:OTTHUMG00000150267
12
12p13.31
alpha-2-macroglobulin
protein-coding
A2M
alpha-2-macroglobulin
O
C3 and PZP-like alpha-2-macroglobulin domain-containing protein 5|alpha-2-M
2_at
3_at
3 A2MP1
-
A2MP
HGNC:HGNC:8|Ensembl:ENSG00000256069
12
12p13.31
alpha-2-macroglobulin pseudogene 1
pseudo
A2MP1
alpha-2-macroglobulin pseudogene 1
O
-
3_at
9_at
9 NAT1
-
AAC1|MNAT|NAT-1|NATI
MIM:108345|HGNC:HGNC:7645|Ensembl:ENSG00000171428|HPRD:00149|Vega:OTTHUMG00000097001
8
8p22
N-acetyltransferase 1 (arylamine N-acetyltransferase)
protein-coding
NAT1
N-acetyltransferase 1 (arylamine N-acetyltransferase)
O
N-acetyltransferase type 1|arylamide acetylase 1|arylamine N-acetyltransferase 1|monomorphic arylamine N-acetyltransferase
9_at
10_at
10 NAT2
-
AAC2|NAT-2|PNAT
MIM:612182|HGNC:HGNC:7646|Ensembl:ENSG00000156006|HPRD:02000|Vega:OTTHUMG00000130826
8
8p22
N-acetyltransferase 2 (arylamine N-acetyltransferase)
protein-coding
NAT2
N-acetyltransferase 2 (arylamine N-acetyltransferase)
O
N-acetyltransferase type 2|arylamide acetylase 2|arylamine N-acetyltransferase 2
10_at
12_at
12 SERPINA3
GIG24
AACT|ACT|GIG25
MIM:107280|HGNC:HGNC:16|Ensembl:ENSG00000196136|Ensembl:ENSG00000273259|HPRD:00120|Vega:OTTHUMG00000029851
14
14q32.1
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
protein-coding
SERPINA3
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
O
alpha-1-antichymotrypsin|cell growth-inhibiting gene 24/25 protein|growth-inhibiting protein 24|growth-inhibiting protein 25|serine (or cysteine) proteinase inhibitor, clade A, member 3|serpin A3
12_at
13_at
13 AADAC
-
CES5A1|DAC
MIM:600338|HGNC:HGNC:17|Ensembl:ENSG00000114771|HPRD:02640|Vega:OTTHUMG00000159876
3
3q25.1
arylacetamide deacetylase
protein-coding
AADAC
arylacetamide deacetylase
O
arylacetamide deacetylase (esterase)
13_at
14_at
14 AAMP
-
-
MIM:603488|HGNC:HGNC:18|Ensembl:ENSG00000127837|HPRD:04600|Vega:OTTHUMG00000155202
2
2q35
angio-associated, migratory cell protein
protein-coding
AAMP
angio-associated, migratory cell protein
O
angio-associated migratory cell protein
14_at
15_at
15 AANAT
-
DSPS|SNAT
MIM:600950|HGNC:HGNC:19|Ensembl:ENSG00000129673|HPRD:02974|Vega:OTTHUMG00000180179
17
17q25.1
aralkylamine N-acetyltransferase
protein-coding
AANAT
aralkylamine N-acetyltransferase
O
arylalkylamine N-acetyltransferase|serotonin N-acetyltransferase|serotonin acetylase
15_at
16_at
16 AARS
-
CMT2N
MIM:601065|HGNC:HGNC:20|Ensembl:ENSG00000090861|HPRD:03042|Vega:OTTHUMG00000177042
16
16q22
alanyl-tRNA synthetase
protein-coding
AARS
alanyl-tRNA synthetase
O
alaRS|alanine tRNA ligase 1, cytoplasmic|alanine--tRNA ligase, cytoplasmic|alanyl-tRNA synthetase, cytoplasmic|renal carcinoma antigen NY-REN-42
16_at
18_at
18 ABAT
hCG_1984265
GABA-AT|GABAT|NPD009
MIM:137150|HGNC:HGNC:23|Ensembl:ENSG00000183044|HPRD:00661|Vega:OTTHUMG00000048201
16
16p13.2
4-aminobutyrate aminotransferase
protein-coding
ABAT
4-aminobutyrate aminotransferase
O
(S)-3-amino-2-methylpropionate transaminase|4-aminobutyrate aminotransferase, mitochondrial|4-aminobutyrate transaminase|GABA aminotransferase|GABA transaminase|GABA transferase|gamma-amino-N-butyrate transaminase
18_at
19_at
19 ABCA1
-
ABC-1|ABC1|CERP|HDLDT1|TGD
MIM:600046|HGNC:HGNC:29|Ensembl:ENSG00000165029|HPRD:02501|Vega:OTTHUMG00000020417
9
9q31.1
ATP-binding cassette, sub-family A (ABC1), member 1
protein-coding
ABCA1
ATP-binding cassette, sub-family A (ABC1), member 1
O
ATP-binding cassette sub-family A member 1|ATP-binding cassette transporter A1|cholesterol efflux regulatory protein|membrane-bound
19_at
20_at
20 ABCA2
RP11-229P13.8
ABC2
MIM:600047|HGNC:HGNC:32|Ensembl:ENSG00000107331|HPRD:08967|Vega:OTTHUMG00000020958
9
9q34
ATP-binding cassette, sub-family A (ABC1), member 2
protein-coding
ABCA2
ATP-binding cassette, sub-family A (ABC1), member 2
O
ATP-binding cassette 2|ATP-binding cassette sub-family A member 2|ATP-binding cassette transporter 2|ATP-binding cassette, sub-family A, member 2
20_at
21_at
21 ABCA3
-
ABC-C|ABC3|EST111653|LBM180|SMDP3
MIM:601615|HGNC:HGNC:33|Ensembl:ENSG00000167972|HPRD:03369|Vega:OTTHUMG00000128845
16
16p13.3
ATP-binding cassette, sub-family A (ABC1), member 3
protein-coding
ABCA3
ATP-binding cassette, sub-family A (ABC1), member 3
O
ABC transporter 3|ABC-C transporter|ATP-binding cassette sub-family A member 3|ATP-binding cassette transporter 3
21_at
22_at
22 ABCB7
-
ABC7|ASAT|Atm1p|EST140535
MIM:300135|HGNC:HGNC:48|Ensembl:ENSG00000131269|HPRD:02137|Vega:OTTHUMG00000021862
X
Xq13.3
ATP-binding cassette, sub-family B (MDR/TAP), member 7
protein-coding
ABCB7
ATP-binding cassette, sub-family B (MDR/TAP), member 7
O
ABC transporter 7 protein|ATP-binding cassette sub-family B member 7, mitochondrial|ATP-binding cassette transporter 7
22_at
23_at
23 ABCF1
DADB-129D20.7
ABC27|ABC50
MIM:603429|HGNC:HGNC:70|Ensembl:ENSG00000204574|HPRD:09139|Vega:OTTHUMG00000031094
6
6p21.33
ATP-binding cassette, sub-family F (GCN20), member 1
protein-coding
ABCF1
ATP-binding cassette, sub-family F (GCN20), member 1
O
ATP-binding cassette 50 (TNF-alpha stimulated)|ATP-binding cassette sub-family F member 1|TNF-alpha-stimulated ABC protein|TNFalpha-inducible ATP-binding protein
23_at
24_at
24 ABCA4
-
ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1
MIM:601691|HGNC:HGNC:34|Ensembl:ENSG00000198691|HPRD:03408|Vega:OTTHUMG00000010622
1
1p22
ATP-binding cassette, sub-family A (ABC1), member 4
protein-coding
ABCA4
ATP-binding cassette, sub-family A (ABC1), member 4
O
ATP binding cassette transporter|ATP-binding cassette sub-family A member 4|ATP-binding cassette transporter, retinal-specific|ATP-binding transporter, retina-specific|RIM ABC transporter|RIM protein|photoreceptor rim protein|retina-specific ABC transporter|retinal-specific ATP-binding cassette transporter|stargardt disease protein
24_at
25_at
25 ABL1
RP11-83J21.1
ABL|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl
MIM:189980|HGNC:HGNC:76|Ensembl:ENSG00000097007|HPRD:01809|Vega:OTTHUMG00000020813
9
9q34.1
ABL proto-oncogene 1, non-receptor tyrosine kinase
protein-coding
ABL1
ABL proto-oncogene 1, non-receptor tyrosine kinase
O
Abelson tyrosine-protein kinase 1|bcr/c-abl oncogene protein|c-abl oncogene 1, receptor tyrosine kinase|proto-oncogene c-Abl|proto-oncogene tyrosine-protein kinase ABL1|tyrosine-protein kinase ABL1|v-abl Abelson murine leukemia viral oncogene homolog 1
25_at
26_at
26 AOC1
-
ABP|ABP1|DAO|DAO1|KAO
MIM:104610|HGNC:HGNC:80|Ensembl:ENSG00000002726|HPRD:00088|Vega:OTTHUMG00000158306
7
7q36.1
amine oxidase, copper containing 1
protein-coding
AOC1
amine oxidase, copper containing 1
O
amiloride binding protein 1 (amine oxidase (copper-containing))|amiloride-binding protein 1|amiloride-sensitive amine oxidase|amiloride-sensitive amine oxidase [copper-containing]|amine oxidase copper domain-containing protein 1|diamine oxidase|histaminase|kidney amine oxidase
26_at
27_at
27 ABL2
RP11-177A2.3
ABLL|ARG
MIM:164690|HGNC:HGNC:77|Ensembl:ENSG00000143322|HPRD:01259|Vega:OTTHUMG00000035199
1
1q25.2
ABL proto-oncogene 2, non-receptor tyrosine kinase
protein-coding
ABL2
ABL proto-oncogene 2, non-receptor tyrosine kinase
O
Abelson tyrosine-protein kinase 2|abelson-related gene protein|c-abl oncogene 2, non-receptor tyrosine kinase|tyrosine-protein kinase ARG|v-abl Abelson murine leukemia viral oncogene homolog 2
27_at
25582 7440 Kbytes .Supplementary file Size Download File type/resource GPL20103_hugene20st_Hs_ENTREZG.cdf.gz
7.4 Mb
(ftp) (http) CDF
GPL20103_hugene20st_Hs_ENTREZG_desc.annot.txt.gz
118.1 Kb
(ftp) (http) TXT
GPL20103_hugene20st_Hs_ENTREZG_desc.txt.gz
284.7 Kb
(ftp) (http) TXT
GPL20103_hugene20st_Hs_ENTREZG_mapping.txt.gz
3.8 Mb
(ftp) (http) TXT
GPL20103_hugene20st_Hs_ENTREZG_probe_tab.txt.gz
6.5 Mb
(ftp) (http) TXT
Less...
More...