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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 05, 2015 |
| Title |
Illumina HiSeq 2500 (Schmidtea mediterranea) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Schmidtea mediterranea |
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| Submission date |
May 05, 2015 |
| Last update date |
Apr 21, 2016 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (986)
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GSM1675833, GSM1675834, GSM1675835, GSM1675836, GSM1675837, GSM1861712
GSM1861713, GSM1861714, GSM1861715, GSM1861716, GSM1861717, GSM1861718, GSM1861719, GSM1861720, GSM1861721, GSM1861722, GSM1861723, GSM1861724, GSM1861725, GSM1861726, GSM1861727, GSM1861728, GSM1861729, GSM1861730, GSM1861731, GSM1861732, GSM1861733, GSM1861734, GSM1861735, GSM1861736, GSM1861737, GSM1861738, GSM1861739, GSM1861740, GSM1861741, GSM1861742, GSM1861743, GSM1861744, GSM1861745, GSM1861746, GSM1861747, GSM1861748, GSM1861749, GSM1861750, GSM1861751, GSM1861752, GSM1861753, GSM1861754, GSM1861755, GSM1861756, GSM1861757, GSM1861758, GSM1861759, GSM1861760, GSM1861761, GSM1880993, GSM1880994, GSM1880995, GSM1880996, GSM1880997, GSM1880998, GSM1880999, GSM1881000, GSM1901090, GSM1901091, GSM1901092, GSM1901093, GSM1901094, GSM1901095, GSM1908824, GSM1908825, GSM1908826, GSM1908827, GSM1908828, GSM1908829, GSM1908830, GSM1908831, GSM1908832, GSM1908833, GSM1908834, GSM1908835, GSM1908836, GSM1908837, GSM1908838, GSM1908839, GSM1908840, GSM1908841, GSM1908842, GSM1908843, GSM1908844, GSM1908845, GSM1908846, GSM1908847, GSM1908848, GSM1908849, GSM1908850, GSM1908851, GSM1908852, GSM1908853, GSM1908854, GSM1908855, GSM1908856, GSM1908857, GSM1908858, GSM1908859, GSM1908860, GSM1908861, GSM1908862, GSM1908863, GSM1908864, GSM1908865, GSM1908866, GSM1908867, GSM1908868, GSM1908869, GSM1908870, GSM1908871, GSM1908872, GSM1908873, GSM1908874, GSM1908875, GSM1908876, GSM1908877, GSM1908878, GSM1908879, GSM1908880, GSM1908881, GSM1908882, GSM1908883, GSM1908884, GSM1908885, GSM1908886, GSM1908887, GSM1911790, GSM1911791, GSM1911792, GSM1911793, GSM1911794, GSM1911795, GSM1911796, GSM1911797, GSM1911798, GSM1911799, GSM1911800, GSM1911801, GSM1911802, GSM1911803, GSM1911804, GSM1911805, GSM1911806, GSM1911807, GSM1911808, GSM1911809, GSM1911810, GSM1911811, GSM1911812, GSM1911813, GSM1911814, GSM1911815, GSM1911816, GSM1911817, GSM1911818, GSM1911819, GSM1911820, GSM1911821, GSM1911822, GSM1911823, GSM1911824, GSM1911825, GSM1911826, GSM1911827, GSM1911828, GSM1911829, GSM1911830, GSM1911831, GSM1911832, GSM1911833, GSM1911834, GSM1911835, GSM1911836, GSM1911837, GSM1911838, GSM1911839, GSM1911840, GSM1911841, GSM1911842, GSM1911843, GSM1911844, GSM1911845, GSM1911846, GSM1911847, GSM1920194, GSM1920195, GSM2081505, GSM2081506, GSM2081507, GSM2081508, GSM2081509, GSM2081510, GSM2107439, GSM2107440, GSM2107465, GSM2107466, GSM2107467, GSM2107468, GSM2107469, GSM2107470, GSM2107471, GSM2107472, GSM2107473, GSM2107474, GSM2107475, GSM2107476, GSM2107477, GSM2107478, GSM2107479, GSM2107480, GSM2107481, GSM2107482, GSM2107483, GSM2107484, GSM2107485, GSM2107486, GSM2107487, GSM2107488, GSM2107489, GSM2107490, GSM2107491, GSM2107492, GSM2107493, GSM2107494, GSM2107495, GSM2107496, GSM2107497, GSM2107498, GSM2107499, GSM2107500, GSM2107501, GSM2107502, GSM2107503, GSM2107504, GSM2107505, GSM2107506, GSM2107507, GSM2107508, GSM2107509, GSM2107510, GSM2107511, GSM2107512, GSM2107513, GSM2107514, GSM2107515, GSM2107516, GSM2107517, GSM2107518, GSM2107519, GSM2107520, GSM2107521, GSM2107522, GSM2107523, GSM2107524, GSM2107525, GSM2107526, GSM2107527, GSM2107528, GSM2107529, GSM2107530, GSM2107531, GSM2107532, GSM2107533, GSM2107534, GSM2107535, GSM2107536, GSM2107537, GSM2107538, GSM2107539, GSM2107540, GSM2107541, GSM2107542, GSM2107543, GSM2107544, GSM2107545, GSM2107546, GSM2107547, GSM2107548, GSM2107549, GSM2107550, GSM2107551, GSM2107552, GSM2107553, GSM2107554, GSM2107555, GSM2107556, GSM2107557, GSM2107558, GSM2107559, GSM2107560, GSM2107561, GSM2107562, GSM2107563, GSM2107564, GSM2107565, GSM2107566, GSM2107567, GSM2107568, GSM2107569, GSM2107570, GSM2107571, GSM2107572, GSM2107573, GSM2107574, GSM2107575, GSM2107576, GSM2107577, GSM2107578, GSM2107579, GSM2107580, GSM2107581, GSM2107582, GSM2107583, GSM2107584, GSM2107585, GSM2107586, GSM2107587, GSM2107588, GSM2107589, GSM2107590, GSM2107591, GSM2107592, GSM2107593, GSM2107594, GSM2107595, GSM2107596, GSM2107597, GSM2107598, GSM2107599, GSM2107600, GSM2107601, GSM2107602, GSM2107603, GSM2107604, GSM2107605, GSM2107606, GSM2107607, GSM2107608, GSM2130497, GSM2130498, GSM2130499, GSM2130500, GSM2130501, GSM2130502, GSM2130503, GSM2130504, GSM2130505, GSM2130506, GSM2130507, GSM2130508, GSM2130509, GSM2130510, GSM2130511, GSM2130512, GSM2130513, GSM2130514, GSM2130515, GSM2130516, GSM2130517, GSM2130518, GSM2130519, GSM2130520, GSM2130521, GSM2130522, GSM2130523, GSM2130524, GSM2130525, GSM2130526, GSM2130527, GSM2130528, GSM2130529, GSM2130530, GSM2130531, GSM2130532, GSM2130533, GSM2130534, GSM2130535, GSM2130536, GSM2130537, GSM2130538, GSM2130539, GSM2130540, GSM2130541, GSM2130542, GSM2130543, GSM2130544, GSM2130545, GSM2130546, GSM2130547, GSM2130548, GSM2130549, GSM2130550, GSM2130551, GSM2130552, GSM2130553, GSM2130554, GSM2130555, GSM2130556, GSM2130557, GSM2130558, GSM2130559, GSM2130560, GSM2130561, GSM2130562, GSM2130563, GSM2130564, GSM2130565, GSM2130566, GSM2130567, GSM2130568, GSM2130569, GSM2130570, GSM2130571, GSM2130572, GSM2130573, GSM2130574, GSM2130575, GSM2130576, GSM2130577, GSM2130578, GSM2130579, GSM2187961, GSM2187962, GSM2187963, GSM2187964, GSM2225868, GSM2225869, GSM2225870, GSM2225871, GSM2225872, GSM2225873, GSM2225874, GSM2225875, GSM2225876, GSM2225877, GSM2225878, GSM2225879, GSM2225880, GSM2225881, GSM2225882, GSM2225883, GSM2225884, GSM2225885, GSM2225886, GSM2225887, GSM2225888, GSM2225889, GSM2225890, GSM2225891, GSM2225892, GSM2225893, GSM2225894, GSM2225895, GSM2225896, GSM2225897, GSM2225898, GSM2225899, GSM2225900, GSM2225901, GSM2225902, GSM2225903, GSM2225904, GSM2225905, GSM2225906, GSM2225907, GSM2225908, GSM2225909, GSM2225910, GSM2225911, GSM2225912, GSM2225913, GSM2225914, GSM2225915, GSM2225916, GSM2225917, GSM2225918, GSM2225919, GSM2225920, GSM2225921, GSM2225922, GSM2225923, GSM2225924, GSM2225925, GSM2225926, GSM2225927, GSM2225928, GSM2225929, GSM2225930, GSM2225931, GSM2225932, GSM2225933, GSM2225934, GSM2225935...
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| Series (32)
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| GSE68581 |
A mex3 homolog is required for differentiation during planarian stem cell lineage development |
| GSE72389 |
RNA Seq analysis of Schmidtea mediterranea treated with RNAi against chd4, p53, or unc22 to identify factors involved in neoblast differentiation. |
| GSE73027 |
RNA Seq analysis of sorted Schmidtea mediterranea X1 and Xins cells to identify factors specific to neoblasts |
| GSE73700 |
Planarian yorkie/YAP functions to integrate adult stem cell proliferation, organ homeostasis, and maintenance of axial patterning |
| GSE73701 |
RNAseq in the whole whole freshwater planarian, Schmidtea mediterranea, following RNAi of lhx1/5-1, pitx or yorkie |
| GSE74054 |
Set1 and MLL1/2 target distinct sets of functionally different genomic loci in vivo: An in depth RNA-seq analysis of H3K4me3 targets in vivo and upon Set1 and mll1 knockdown |
| GSE74153 |
Set1 and MLL1/2 target distinct sets of functionally different genomic loci in vivo: An in depth ChIP-seq analysis of H3K4me3 targets in vivo and upon Set1 and mll1 knockdown |
| GSE74169 |
Set1 and MLL1/2 target distinct sets of functionally different genomic loci in vivo |
| GSE74419 |
H3K36me3 is significantly more enriched at Set1-affected loci than at MLL1/2-affected loci in planarian stem cells |
| GSE78937 |
HOX gene complement and expression in the planarian Schmidtea mediterranea |
| GSE79866 |
In silico lineage tracing through single cell transcriptomes identifies a neural stem cell population in planarians |
| GSE80543 |
RNA Seq analysis in flatworm following 6, 12, or 18 day treatment with RNAi against Pax5, Sox8, or Zfp1, relative to unc22 to identify transcriptional targets. |
| GSE80544 |
RNA Seq analysis of neoblasts from Schmidtea mediterranea treated with RNAi against zfp1, p53, or unc22 to identify factors involved in neoblast differentiation. |
| GSE80562 |
The cell type and dynamic complexity of the planarian epidermis is determined by both conserved and derived transcriptional regulators. |
| GSE82280 |
RNA Seq analysis of gene expression during Schmidtea mediterranea embryogenesis, including yolk and adult samples |
| GSE84025 |
Egf signaling directs neoblast repopulation by regulating asymmetric cell division in planarians |
| GSE97787 |
Yorkie is required to restrict the injury responses in planarians |
| GSE102399 |
The planarian TCF/LEF factor Smed-tcf1 is required for the regeneration of dorsal-lateral neuronal subtypes |
| GSE106219 |
FOX and ETS family transcription factors regulate the pigment cell lineage in planarians |
| GSE107873 |
Tetraspanin family member functionally resolves and facilitates the purification of adult pluripotent stem cells used for whole-body regeneration (Single) |
| GSE107874 |
A tetraspanin family member functionally resolves and facilitates the purification of adult pluripotent stem cells used for whole-body regeneration (Bulk) |
| GSE107875 |
A tetraspanin family member functionally resolves and facilitates the purification of adult pluripotent stem cells used for whole-body regeneration |
| GSE118674 |
Smed-myb-1 specifies early temporal identity during planarian epidermal differentiation |
| GSE134013 |
Transcriptome of cct3A(RNAi) planarians at 72 hours of regeneration |
| GSE134148 |
Transcriptional profile of planarian FACS populations at different nutritional status |
| GSE134300 |
Tnfaip2/Exoc3 driven lipid metabolism is essential for stem cell differentiation & organ homeostasis [Schmidtea mediterranea] |
| GSE134302 |
Tnfaip2/Exoc3 driven lipid metabolism is essential for stem cell differentiation & organ homeostasis |
| GSE157860 |
Identification of TOR-responsive slow-cycling neoblasts in planarians |
| GSE158706 |
Canonical and early lineage-specific stem cell types identified in planarian SirNeoblasts |
| GSE159880 |
The DEAD-box helicase DDX56 is a conserved stemness regulator in normal and cancer stem cells |
| GSE168970 |
Examination of gene expression in S. mediterranea transitioning from recirculation to static culture in the presence or absence of Gentamycin at 0, 1, 2, 3, or 4 days |
| GSE191229 |
Transcriptional profiling of laser captured gonadal tissue from the planarian Schmidtea mediterranea |
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| Supplementary data files not provided |
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