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Platform GPL2058 Query DataSets for GPL2058
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 07 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 7.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) qchunxu@ucsd.edu
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51743
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR02P223280014 CHR2 223280014 TGAAGATATTGCCATTTTGCAAATGCAATAATAAATTAAAAGCTTTACAT SET07
2 CHR02P223280114 CHR2 223280114 ATATCTAGCACGGCTATGTATTGCTGACTACAAAGAAAAACTTTTTATCC SET07
3 CHR02P223280214 CHR2 223280214 AAAGCTGGAGGAATTCAAATGGGACTAAAAAAGAAAACACGAGGTTGTTG SET07
4 CHR02P223280314 CHR2 223280314 TAAATCAACTCGGCAGACACAAAAATAATTAATTCAGCAAGGAAGGTTTT SET07
5 CHR02P223280414 CHR2 223280414 CATTCTCCCTTTCTTTAAAAAGGAGATTTGGGCCAGGTCGTTGTCTCTTT SET07
6 CHR02P223280514 CHR2 223280514 TAAACCAGGGCTCTCCTCATACTCTTAAGTGTAGCGACCACAGCCTTAGA SET07
7 CHR02P223280614 CHR2 223280614 ATGGATTAACAGCCATGTTTTCATCCATGAGCAGAACATCTCGAAAACCT SET07
8 CHR02P223280714 CHR2 223280714 CTGAAATGGGCTCGTTTATGATCATAAACATTCTTGAGCCTTCACAAACA SET07
9 CHR02P223280814 CHR2 223280814 AAACAGAAAGAGGCTCAAGCCTTTGAGAGGCTGCCACTTTTGTAAAAAAT SET07
10 CHR02P223280914 CHR2 223280914 AATCACTCCTTTCTCTTCTACAGATAAATTCCTGGAAAGTGTAAAGGGAA SET07
11 CHR02P223281014 CHR2 223281014 GATTCTTCACAATGATAAAGGTAGGTCAAGGGCAGAGAATTTGCAACCAG SET07
12 CHR02P223281114 CHR2 223281114 ATGCGTACCCAAAAACGTCCCAAAAAATTAGCTATCTTGAAATAGAAGCT SET07
13 CHR02P223281214 CHR2 223281214 AAGAGAAAGGCAAGGAATTACCAAGCCATAGTAGGAAAGATTTTAACGGC SET07
14 CHR02P223281314 CHR2 223281314 CCCATCCACATAACAAGTCCTTACCCCCTGGATGAGCAAACAACCATCAT SET07
15 CHR02P223281414 CHR2 223281414 AAAAATGACAAGTGAAATCAAAAGCAGTCTTGAGTTTTGTGTACACATAT SET07
16 CHR02P223281514 CHR2 223281514 TCAAAAGGAACTGTGCTGAGCAATTGAAATCTAATTTGAAATGGAACCAC SET07
17 CHR02P223281614 CHR2 223281614 AGCTGACACCAAATATGCAATTTACATACATTACACACTAATAATCTCAA SET07
18 CHR02P223281714 CHR2 223281714 TTGCTTTTGTAAAATGTGAATAAGAACAAAAAGTCGATCCTGGCATTTTA SET07
19 CHR02P223281814 CHR2 223281814 GTCTATTTCAGAGATGGTATCTCATCAACACAAGTCTGTGATGATTCAGC SET07
20 CHR02P223281914 CHR2 223281914 TTCTTTGTTCCTGAGTGTTGCTGAGTGGTGGGCAAACATTCAGGCTTTTT SET07

Total number of rows: 382520

Table truncated, full table size 35056 Kbytes.




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