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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 01, 2015 |
| Title |
Lewis-Sigler Institute Homo sapiens 44.5K [HOAN] |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Lewis-Sigler Institute Microarray Facility |
| Manufacture protocol |
The following parameters were used to manufacture the printed array named ""HOAN"""
Printer: SFGF1
Array Configuration: (columns X rows) 48 sectors ( 4 X 12 spotted) Standard 48 tip
Spot Columns per Sector: 29
Spot Rows per Sector: 32
Column Spacing: 151
Row Spacing: 151
Plate Orientation: "rotated 90 degrees clockwise (P1 top-left, A1 top-right)"
Printhead Dip Dynamics: "top to bottom, right to left"
Sector Spotting Dynamics: "left to right, top to bottom"
Number of Slides: 256
Plates used in this print, in order."
PLATEID PLATENAME PLATE_VISITS IS_FLIPPED
100833 HOP_1
100834 HOP_49
100835 HOP_43
100836 HOP_74
100837 HOP_68
100838 HOP_17
100839 HOP_60
100840 HOP_93
100841 HOP_52
100842 HOP_58
100843 HOP_83
100844 HOP_121
100845 HOP_102
100846 HOP_42
100847 HOP_7
100848 HOP_10
100849 HOP_38
100850 HOP_72
100851 HOP_69
100852 HOP_63
100853 HOP_86
100854 HOP_53
100855 HOP_125
100856 HOP_25
100857 HOP_39
100858 HOP_82
100859 HOP_122
100860 HOP_15
100861 HOP_100
100862 HOP_9
100863 HOP_48
100864 HOP_99
100865 HOP_91
100866 HOP_97
100867 HOP_28
100868 HOP_32
100869 HOP_4
100870 HOP_45
100871 HOP_6
100872 HOP_30
100873 HOP_88
100874 HOP_56
100875 HOP_11
100876 HOP_70
100877 HOP_98
100878 HOP_75
100879 HOP_44
100880 HOP_118
100881 HOP_29
100882 HOP_3
100883 HOP_81
100884 HOP_34
100885 HOP_37
100886 HOP_120
100887 HOP_22
100888 HOP_107
100889 HOP_12
100890 HOP_104
100891 HOP_41
100892 HOP_8
100893 HOP_36
100894 HOP_16
100895 HOP_94
100896 HOP_67
100897 HOP_78
100898 HOP_59
100899 HOP_106
100900 HOP_2
100901 HOP_77
100902 HOP_40
100903 HOP_47
100904 HOP_50
100905 HOP_90
100906 HOP_80
100907 HOP_23
100908 HOP_19
100909 HOP_13
100910 HOP_27
100911 HOP_92
100912 HOP_105
100913 HOP_71
100914 HOP_73
100915 HOP_84
100916 HOP_33
100917 HOP_24
100918 HOP_123
100919 HOP_62
100920 HOP_95
100921 HOP_55
100922 HOP_18
100923 HOP_5
100924 HOP_46
100925 HOP_64
100926 HOP_26
100927 HOP_65
100928 HOP_76
100929 HOP_103
100930 HOP_54
100931 HOP_21
100932 HOP_89
100933 HOP_87
100934 HOP_66
100935 HOP_96
100936 HOP_85
100937 HOP_124
100938 HOP_101
100939 HOP_57
100940 HOP_61
100941 HOP_35
100942 HOP_51
100943 HOP_31
100944 HOP_119
100945 HOP_20
100946 HOP_79
100947 HOP_14
100948 HOP_128
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| Description |
blockType=3 xLeft=2000 yTop=5800
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| Submission date |
Aug 26, 2015 |
| Last update date |
Nov 01, 2015 |
| Contact name |
Fiona Strouts |
| Organization name |
Stanford
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| Street address |
Campus Drive
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| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
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| Samples (381)
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GSM1862356, GSM1862357, GSM1862358, GSM1862359, GSM1862360, GSM1862361
GSM1862362, GSM1862363, GSM1862364, GSM1862365, GSM1862366, GSM1862367, GSM1862368, GSM1862369, GSM1862370, GSM1862371, GSM1862372, GSM1862373, GSM1862374, GSM1862375, GSM1862376, GSM1862377, GSM1862378, GSM1862379, GSM1862380, GSM1862381, GSM1862382, GSM1862383, GSM1862384, GSM1862385, GSM1862386, GSM1862387, GSM1862388, GSM1862389, GSM1862390, GSM1862391, GSM1862392, GSM1862393, GSM1862394, GSM1862395, GSM1862396, GSM1862397, GSM1862398, GSM1862399, GSM1862400, GSM1862401, GSM1862402, GSM1862403, GSM1862404, GSM1862405, GSM1862406, GSM1862407, GSM1862408, GSM1862409, GSM1862410, GSM1862411, GSM1862412, GSM1862413, GSM1862414, GSM1862415, GSM1862416, GSM1862417, GSM1862418, GSM1862419, GSM1862420, GSM1862421, GSM1862422, GSM1862423, GSM1862424, GSM1862425, GSM1862426, GSM1862427, GSM1862428, GSM1862429, GSM1862430, GSM1862431, GSM1862432, GSM1862433, GSM1862434, GSM1862435, GSM1862436, GSM1862437, GSM1862438, GSM1862439, GSM1862440, GSM1862441, GSM1862442, GSM1862443, GSM1862444, GSM1862445, GSM1862446, GSM1862447, GSM1862448, GSM1862449, GSM1862450, GSM1862451, GSM1862452, GSM1862453, GSM1862454, GSM1862455, GSM1862456, GSM1862457, GSM1862458, GSM1862459, GSM1862460, GSM1862461, GSM1862462, GSM1862463, GSM1862464, GSM1862465, GSM1862466, GSM1862467, GSM1862468, GSM1862469, GSM1862470, GSM1862471, GSM1862472, GSM1862473, GSM1862474, GSM1862475, GSM1862476, GSM1862477, GSM1862478, GSM1862479, GSM1862480, GSM1862481, GSM1862482, GSM1862483, GSM1862484, GSM1862485, GSM1862486, GSM1862487, GSM1862488, GSM1862489, GSM1862490, GSM1862491, GSM1862492, GSM1862493, GSM1862494, GSM1862495, GSM1862496, GSM1862497, GSM1862498, GSM1862499, GSM1862500, GSM1862501, GSM1862502, GSM1862503, GSM1862504, GSM1862505, GSM1862506, GSM1862507, GSM1862508, GSM1862509, GSM1862510, GSM1862511, GSM1862512, GSM1862513, GSM1862514, GSM1862515, GSM1862516, GSM1862517, GSM1862518, GSM1862519, GSM1862520, GSM1862521, GSM1862522, GSM1862523, GSM1862524, GSM1862525, GSM1862526, GSM1862527, GSM1862528, GSM1862529, GSM1862530, GSM1862531, GSM1862532, GSM1862533, GSM1862534, GSM1862535, GSM1862536, GSM1862537, GSM1862538, GSM1862539, GSM1862540, GSM1862541, GSM1862542, GSM1862543, GSM1862544, GSM1862545, GSM1862546, GSM1862547, GSM1862548, GSM1862549, GSM1862550, GSM1862551, GSM1862552, GSM1862553, GSM1862554, GSM1862555, GSM1862556, GSM1862557, GSM1862558, GSM1862559, GSM1862560, GSM1862561, GSM1862562, GSM1862563, GSM1862564, GSM1862565, GSM1862566, GSM1862567, GSM1862568, GSM1862569, GSM1862570, GSM1862571, GSM1862572, GSM1862573, GSM1862574, GSM1862575, GSM1862576, GSM1862577, GSM1862578, GSM1862579, GSM1862580, GSM1862581, GSM1862582, GSM1862583, GSM1862584, GSM1862585, GSM2537347, GSM2537348, GSM2537349, GSM2537350, GSM2537351, GSM2537352, GSM2537353, GSM2537354, GSM2537355, GSM2537356, GSM2537357, GSM2537358, GSM2537359, GSM2537360, GSM2537361, GSM2537362, GSM2537363, GSM2537364, GSM2537365, GSM2537366, GSM2537367, GSM2537368, GSM2537369, GSM2537370, GSM2537371, GSM2537372, GSM2537373, GSM2537374, GSM2537375, GSM2537376, GSM2537377, GSM2537378, GSM2537379, GSM2537380, GSM2537381, GSM2537382, GSM2537383, GSM2537384, GSM2537385, GSM2537386, GSM2586260, GSM2586261, GSM2586262, GSM2586263, GSM2586264, GSM2586265, GSM2586266, GSM2586267, GSM2586268, GSM2586269, GSM2586270, GSM2586271, GSM2586272, GSM2586273, GSM2586274, GSM2586275, GSM2586276, GSM2586277, GSM2586278, GSM2586279, GSM2586280, GSM2586281, GSM2586282, GSM2586283, GSM2586284, GSM2586285, GSM2586286, GSM2586287, GSM2586288, GSM2586289, GSM2586290, GSM2586291, GSM2586292, GSM2586293, GSM2586294, GSM2586295, GSM2586296, GSM2586336, GSM2586337, GSM2586338, GSM2586339, GSM2586340, GSM2586341, GSM2586342, GSM2586343, GSM2586344, GSM2586345, GSM2586346, GSM2586347, GSM2586348, GSM6265402, GSM6265403, GSM6265404, GSM6265405, GSM6265406, GSM6265407, GSM6265408, GSM6265409, GSM6265410, GSM6265411, GSM6265412, GSM6265413, GSM6265414, GSM6265415, GSM6265416, GSM6265417, GSM6265418, GSM6265419, GSM6265420, GSM6265421, GSM6265422, GSM6265423, GSM6265424, GSM6265425, GSM6265426, GSM6265427, GSM6265428, GSM6265429, GSM6265430, GSM6265431, GSM6265432, GSM6265433, GSM6265434, GSM6265435, GSM6265436, GSM6265437, GSM6265438, GSM6265439, GSM6265440, GSM6265441, GSM6265442, GSM6265443, GSM6265444, GSM6265445, GSM6265446, GSM6265447, GSM6265448, GSM6265449, GSM6265450, GSM6265451, GSM6265452, GSM6265453, GSM6265454, GSM6265455, GSM6265456, GSM6265457, GSM6265458, GSM6265459, GSM6265460, GSM6265461, GSM6265462
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| Series (4)
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| GSE72430 |
Live Attenuated Tetravalent Dengue Vaccination in Non-Human Primates |
| GSE96656 |
Nicaragua Dengue Natural Infection |
| GSE98053 |
VT257_DengueVaccination |
| GSE206829 |
Transcriptional response to bacterial and viral pathogens in patients with acute febrile illness |
|
| Data table header descriptions |
| ID |
feature/spot number |
| SEQUENCE |
Probe sequence information |
| OLIGO_ID |
|
| ORF |
Gene symbols |
| SPOT_ID |
|
| Data table |
| ID |
SEQUENCE |
OLIGO_ID |
ORF |
SPOT_ID |
| 1 |
GATTGCACATTGTTGTTTTTTTAATAGTCATTCCAAATATGAGATGCATTGTTACAGGAAGTCCCTTGCC |
hCP000001 |
ACTB |
|
| 2 |
GATTGCACATTGTTGTTTTTTTAATAGTCATTCCAAATATGAGATGCATTGTTACAGGAAGTCCCTTGCC |
hCP000001 |
ACTB |
|
| 3 |
CGGACTCCTGGTCTGAGCCCAATAAAGACTGTTAATTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTG |
hCP000123 |
RPL13A |
|
| 4 |
GATTGCACATTGTTGTTTTTTTAATAGTCATTCCAAATATGAGATGCATTGTTACAGGAAGTCCCTTGCC |
hCP000001 |
ACTB |
|
| 5 |
CTGTTTATTTGCACTATGAGCCTATAGACTATCAGTTCCCTTTGGGCGGATTGTTGTTTAACTTGTAAAT |
hCP000122 |
HPRT1 |
|
| 6 |
CACTTGGTCCTGCGCTTGAGGGGGGGTGTCTAAGTTTCCCCTTTTAAGGTTTCAACAAATTTCATTGCAC |
hCP000124 |
UBC |
|
| 7 |
CACTGAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT |
hCP000121 |
TBP |
|
| 8 |
CGGACTCCTGGTCTGAGCCCAATAAAGACTGTTAATTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTG |
hCP000123 |
RPL13A |
|
| 9 |
TACCATGTACAGAGATTACTTGGAGAGCCTCATGCCGTCTCTACCTTCGCACACTGGTCAAGTATCTGCT |
hHC018505 |
DTX4 |
|
| 10 |
GTTCAGGACTTCCAGCAGTCTGCAGAGTGCCAGCCGAAGGAAGAGGGTTCCAGGGACCCGGCAGACCCGA |
hHC018517 |
PLEKHG3 |
|
| 11 |
ACCATTATTGTGAGCAGCAAAGCACTTTTCTAGTGGTCTGTTTGTGAGCCTTTCACTTGTTTGTTCCCCA |
hHC018601 |
PAF1 |
|
| 12 |
CCCACGTCTGCAAGGAAACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC |
hHC018613 |
MED29 |
|
| 13 |
GCTCCAGAATGTTGCAAGTCTAGGAGAGTGTTCCAATGGCTGACAGAAACTGCCTATTTGAAATGGCTCA |
hHC018697 |
UQCR11 |
|
| 14 |
AATCATCTCTGCACCTCGGGTCTCTGCCAGAGGAAGACTTAAGCATCCCTGCGACCTCACATTCTAGACA |
hHC018709 |
WDR81 |
|
| 15 |
CTATACTATCCAGACGTATGTCTTCCCTGTCACTACTTGCTTGGCACACAGCAATAGCTGCCTCAACCCT |
hHC018793 |
RXFP4 |
|
| 16 |
TTGGGCTCACTGCCTTACTATAGCCGGACAATGGCGAAGTCGTCAGACCAAAAGGATGGCTCAGCAAGTG |
hHR018805 |
LOC388789 |
|
| 17 |
ACAAAACTAAAGAGACCACTCTGTGCCAAGTCGACTATGCCTTAGACACATCCTCCTACCGTCCCCAATG |
hHC016201 |
PSKH1 |
|
| 18 |
TCTGGCCTATGCGTTTGAAACCAAAGCCGACCTCTGTCTGGTGATGACCATCATGAACGGAGGTGACATC |
hHC016213 |
GRK1 |
|
| 19 |
CCTAGGGGGAAATTGGGGATTGTGTCTTTCCCTGTTGAAAATGTTTGGATGGGAATAAATATCTTCAGGA |
hHC016297 |
ZNF263 |
|
| 20 |
CTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAGCCGA |
hHR016309 |
CIRBP |
|
Total number of rows: 44544
Table truncated, full table size 4120 Kbytes.
| Supplementary data files not provided |
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