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Platform GPL21109 Query DataSets for GPL21109
Status Public on Nov 11, 2015
Title Agilent-068300 ArrayXS_Celegans_OakLabs_06-2014_V2 (SystematicName version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Caenorhabditis elegans
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description The provided SEQUENCE is only a subset of at least 30 nucleotides of the sequence in the design (this is a kind of copy protection).

The ID column includes the Agilent SystemincNames. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL19783
 
Submission date Nov 09, 2015
Last update date Nov 11, 2015
Contact name Judith Besseling
E-mail(s) judith.besseling@mpibpc.mpg.de
Organization name Max Planck Institute for Biophysical Chemistry
Department Sleep and Waking
Lab 15800
Street address Am Faßberg 11
City Göttingen
ZIP/Postal code 37075
Country Germany
 
Samples (40) GSM1936615, GSM1936616, GSM1936617, GSM1936618, GSM1936619, GSM1936620 
Series (4)
GSE74848 Expression profiling of mendelian and non-mendelian F1 in gpr-1 overexpressing worms.
GSE82322 elli-1 gene expression array
GSE106672 Long-lived mutants daf-2(e1370) and eat-2 (ad465) expression profilings

Data table header descriptions
ID Agilent SystematicName
CONTROL_TYPE Control type
GENE_SYMBOL
ORF
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description
SEQUENCE Sequence
SPOT_ID NAME; Spot identifier

Data table
ID CONTROL_TYPE GENE_SYMBOL ORF CHROMOSOMAL_LOCATION DESCRIPTION SEQUENCE SPOT_ID
2L52.1 FALSE 2L52.1 2L52.1 chrII:1867-4663 WBGene00007063; Dscr: 2L52.1 encodes a protein with sequence similarity to GLI-family zinc-finger transcription factors; deletion mutations in 2L52.1 are reported to be homozygous viable.; Molecule: 2L52.1; Class: not known ... AATGAACTGTATCTCAACAGGAAAGTCGGCCAGTATGGTCCCGAGCAAACGAA CGZ0000001
2RSSE.1a FALSE 2RSSE.1 2RSSE.1 chrII:15268212-15273314 WBGene00007064; Dscr: 2RSSE.1 encodes a protein that contains a RhoGAP domain and that is similar to Drosophila RhoGAP71E whose activity regulates the number and guidance of mushroom body axons.; Molecule: 2RSSE.1a; Class: not known ... TCGCGGCTAAGGATCCGTATCCAACTGATTTAAGGACATCGGTCAGCTGTGATTTT CGZ0000002
2RSSE.1b FALSE 2RSSE.1 2RSSE.1 chrII:15268212-15275689 WBGene00007064; Dscr: 2RSSE.1 encodes a protein that contains a RhoGAP domain and that is similar to Drosophila RhoGAP71E whose activity regulates the number and guidance of mushroom body axons.; Molecule: 2RSSE.1a; Class: not known ... CCTTCAACGGTTCAAGCTGGCCTCGAACATTGTGTGCTCGATAATTTG CGZ0000003
2RSSE.3 FALSE 2RSSE.3 2RSSE.3 chrII:15277890-15278575 WBGene00044951; Dscr: none available; Molecule: 2RSSE.3; Class: not known ... CGACGGATGAGGTCTCGAAGCGAATGGTTCTTATCGCCGGTCTCCAACGCG CGZ0000004
2RSSE.8 FALSE 2RSSE.8 2RSSE.8 chrII:15264825-15264885 WBGene00201913; Dscr: none available; Molecule: 2RSSE.8; Class: not known ... GCAAATATTGACTTTTTTGGAGGAAATTTGAAAGAAATACATACCACC CGZ0000005
3R5.1a FALSE pot-3 pot-3 chrIII:13780228-13781133 WBGene00007065; Dscr: none available; Molecule: 3R5.1a; Class: Protection Of Telomeres 1 (Pot1) homolog ... AATAAAGGAACACCGAAAGCGTGGCGGTTCGTCTAAATATCGTTTTCTTTT CGZ0000006
3R5.1b FALSE pot-3 pot-3 chrIII:13780220-13781133 WBGene00007065; Dscr: none available; Molecule: 3R5.1a; Class: Protection Of Telomeres 1 (Pot1) homolog ... AATAAAGGAACACCGAAAGCGTGGCGGTTCGTCTAAATATCGTTTTCTTTT CGZ0000007
3R5.2 FALSE 3R5.2 3R5.2 chrIII:13782587-13783459 WBGene00007066; Dscr: none available; Molecule: 3R5.2; Class: not known ... ATCCAGGCTCGATTCAGGCTCCGGCAAGCCAGCAGCCGCCTGCATCAGTTCA CGZ0000008
4R79.1a FALSE nas-6 nas-6 chrIV:17486982-17490497 WBGene00003525; Dscr: nas-6 encodes an astacin-like metalloprotease.; Molecule: 4R79.1a; Class: Nematode AStacin protease ... GCCCGCACTTTGCACAATACTGTACCCGTGCTTCATTTTTCTTTGTT CGZ0000009
4R79.1b FALSE nas-6 nas-6 chrIV:17486982-17488295 WBGene00003525; Dscr: nas-6 encodes an astacin-like metalloprotease.; Molecule: 4R79.1a; Class: Nematode AStacin protease ... GCCCGCACTTTGCACAATACTGTACCCGTGCTTCATTTTTCTTTGTT CGZ0000010
4R79.2a FALSE 4R79.2 4R79.2 chrIV:17480396-17483330 WBGene00007067; Dscr: none available; Molecule: 4R79.2a; Class: not known ... GCTAGGAGTGCCGTTTATCGAGCTGCTGAAAAATTGGCTGTGGAATTTAAAATA CGZ0000011
4R79.2b FALSE 4R79.2 4R79.2 chrIV:17480396-17482329 WBGene00007067; Dscr: none available; Molecule: 4R79.2a; Class: not known ... GCTAGGAGTGCCGTTTATCGAGCTGCTGAAAAATTGGCTGTGGAATTTAAAATA CGZ0000012
4R79.4 FALSE 21ur-5898 21ur-5898 chrIV:17482196-17482216 WBGene00167512; Dscr: none available; Molecule: 4R79.4; Class: 21U-RNA ... TCAGTAGGTGGCATTAACAAT CGZ0000013
4R79.5 FALSE 21ur-10202 21ur-10202 chrIV:17489551-17489571 WBGene00174183; Dscr: none available; Molecule: 4R79.5; Class: 21U-RNA ... TTTTTTGAAACGGTGATTCTG CGZ0000014
6R55.2 FALSE 6R55.2 6R55.2 chrX:17714456-17714832 WBGene00007069; Dscr: none available; Molecule: 6R55.2; Class: not known ... CAAACGTGATGCCTACACTCTACCTCTCAACTGACTACACTGTAACCAAT CGZ0000015
AC3.1 FALSE sri-20 sri-20 chrV:10368556-10369868 "WBGene00005532; Dscr: none available; Molecule: AC3.1; Class: Serpentine Receptor, class I ..." ATGGAAAACGAACAGATCATTCCACTTCGCATCATCTCAATATCAACGGTCTA CGZ0000016
AC3.10 FALSE spe-10 spe-10 chrV:10384157-10385711 "WBGene00004964; Dscr: spe-10 encodes a DHHC-CRD family zinc-finger transmembrane protein with homologs in other eukaryotes and is predicted to be a palmitoyl transferase; spe-10 is required during spermatogenesis and thus for fertility; specifically, spe-10 is required for the proper biogenesis and functioning of specialized Golgi-derived fibrous body-membranous organelle (FB-MO) complexes during spermatid formation; spe-10 localizes to the FB-MOs of spermatids.; Molecule: AC3.10; Class: def ..." TACGTCAACACCCAGCAACGGAATCGATTTGTTAGAATTGAGGAGGAA CGZ0000017
AC3.11 FALSE AC3.11 AC3.11 chrV:10376985-10377317 WBGene00077502; Dscr: none available; Molecule: AC3.11; Class: not known ... TTAATATTTTAGGCAGTCGTGGGAGAATAAAGGGTAGACCAGTGGAAAATT CGZ0000018
AC3.12 FALSE AC3.12 AC3.12 chrV:10378952-10379403 WBGene00077503; Dscr: none available; Molecule: AC3.12; Class: not known ... GTGAAAAGATAGAAGTCAAAGCCGGTGTAACTGTGAGATGTTGTGAAAGCGA CGZ0000019
AC3.13 FALSE AC3.13 AC3.13 chrV:10379917-10380245 WBGene00077504; Dscr: none available; Molecule: AC3.13; Class: not known ... AATTGATCATGGAGTTTTGGAAGAGTTACACGTGGAAGGATCAAGATTAAATACA CGZ0000020

Total number of rows: 57981

Table truncated, full table size 13944 Kbytes.




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