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Status
Public on Apr 26, 2017
Title
Agilent-076115 maize 4x44K Microarray (Feature number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Zea mays Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Zea mays (B73)
Submission date
Oct 19, 2016
Last update date
Apr 26, 2017
Contact name
Anita Zamboni
E-mail(s)
anita.zamboni@univr.it Phone
+39 045 8027831
Organization name
University of Verona
Department
Biotechnology
Street address
Strada Le Grazie, 15
City
Verona
ZIP/Postal code
37134
Country
Italy
Samples (27)
GSM2375338 , GSM2375339 , GSM2375340 , GSM2375341 , GSM2375342 , GSM2375343
GSM2375344 ,
GSM2375345 ,
GSM2375346 ,
GSM4023412 ,
GSM4023413 ,
GSM4023414 ,
GSM4023415 ,
GSM4023416 ,
GSM4023417 ,
GSM4023418 ,
GSM4023419 ,
GSM4023420 ,
GSM4023421 ,
GSM4023422 ,
GSM4023423 ,
GSM4023424 ,
GSM4023425 ,
GSM4023426 ,
GSM4023427 ,
GSM4023428 ,
GSM4023429 Series (2)
GSE89535 Root transcriptional profile of maize seedlings treated with protein hydolysate, free amino acids and inorganic nitrogen.
GSE135613 Root gene expression profiles of two maize inbred lines (Lo5 and T250) showing different nitrogen use efficiency (NUE) in response to the growth without N.
Data table header descriptions ID Agilent feature number
COL column number
ROW row number
PROBE NAME name of the probe
SPOT_ID ID of the spot
CONTROL_TYPE type of control
PRIMARY ACCESSION Transcript ID of the ZmB73_5b_FGS_cdna.fasta (ftp://ftp.gramene.org/pub/gramene/maizesequence.org/release-5b/filtered-set/)
SEQUENCE Probe sequence
Data table ID COL ROW PROBE NAME SPOT_ID CONTROL_TYPE PRIMARY ACCESSION SEQUENCE 1
266
170
GE_BrightCorner
GE_BrightCorner
pos
2
266
168
DarkCorner
DarkCorner
pos
3
266
166
DarkCorner
DarkCorner
pos
4
266
164
DarkCorner
DarkCorner
pos
5
266
162
DarkCorner
DarkCorner
pos
6
266
160
DarkCorner
DarkCorner
pos
7
266
158
DarkCorner
DarkCorner
pos
8
266
156
DarkCorner
DarkCorner
pos
9
266
154
DarkCorner
DarkCorner
pos
10
266
152
DarkCorner
DarkCorner
pos
11
266
150
DarkCorner
DarkCorner
pos
12
266
148
CUST_14511_PI430257437
CUST_14511_PI430257437
FALSE
GRMZM5G874478_T01
GGATGCAAACGTTAGGTTACTTTTACTGTTCGTACTAACCAATTGAGCTTTTGTACTAAA
13
266
146
CUST_33423_PI430257437
CUST_33423_PI430257437
FALSE
GRMZM2G418160_T01
ATGATGCAAATAATTAATATGAAGCACAAGCACAAGTCCCCACATCCATCTCGTCATCCC
14
266
144
CUST_29362_PI430257437
CUST_29362_PI430257437
FALSE
GRMZM2G124096_T01
TATCTATTTTCTCAGAGAGAAGTGCATTTTATCTTGGAATCAGCGGGACTCACGGGTGGC
15
266
142
CUST_34811_PI430257437
CUST_34811_PI430257437
FALSE
GRMZM2G009894_T01
TTAGAGCATGTACAACTTAGAGCTTGATCGGTTTTCATGGTATTATCATGCAATGGAATG
16
266
140
CUST_15984_PI430257437
CUST_15984_PI430257437
FALSE
GRMZM2G179768_T01
AGAGTCTTCGTCGGAGTAGTTGCGGTTGCGGCAGTTGGCCTGCTCCTCCTAGTCCTCTAG
17
266
138
CUST_25211_PI430257437
CUST_25211_PI430257437
FALSE
GRMZM2G037379_T01
GTGTTTTGATAATGAAGTTATTGTTTGCCCCTTCCTCTTAACGATGTTAGAGAAATTCAG
18
266
136
NA
NA
ignore
19
266
134
CUST_6631_PI430257437
CUST_6631_PI430257437
FALSE
GRMZM2G337633_T01
CAGCTGTTTGAACTATAGAGTCTGAATCTGTCCAAATCTAGATAGAGAAGTCTGTTTGTA
20
266
132
NA
NA
ignore
45220 5687 Kbytes .Supplementary data files not provided
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