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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 27, 2016 |
| Title |
Agilent-034592 Arabidopsis thaliana PSC_Custom [Feature number version] |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Arabidopsis thaliana |
| Manufacturer |
Agilent Technologies |
| Manufacture protocol |
see manufacturer's web site at http://www.agilent.com/
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| Description |
Arrays of this design have barcodes that begin with 16034592 or 2534592.
The ID column represents the Agilent Feature Extraction feature number.
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| Submission date |
Nov 27, 2016 |
| Last update date |
Nov 27, 2016 |
| Contact name |
GEO admin |
| E-mail(s) |
geo@ncbi.nlm.nih.gov
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| Organization name |
NCBI/NLM/NIH
|
| Street address |
9000 Rockville Pike
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
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| Samples (68)
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GSM2406803, GSM2406804, GSM2406805, GSM2406806, GSM2406807, GSM2406808
GSM2406809, GSM2406810, GSM2406811, GSM2406812, GSM2406813, GSM2406814, GSM2406815, GSM2406816, GSM2406817, GSM2406818, GSM2406819, GSM2406820, GSM2830552, GSM2830553, GSM2830554, GSM2830555, GSM2830556, GSM2830557, GSM2830558, GSM2830559, GSM3428105, GSM3428106, GSM3428107, GSM3428108, GSM3428109, GSM3428110, GSM3428111, GSM3428112, GSM3428113, GSM3428114, GSM3428115, GSM3428116, GSM3428117, GSM3428118, GSM3428119, GSM3428120, GSM3428121, GSM3428122, GSM3428123, GSM3428124, GSM3428125, GSM3428126, GSM3428127, GSM3428128, GSM3500572, GSM3500573, GSM3500574, GSM3500575, GSM3500576, GSM3500577, GSM3500578, GSM3500579, GSM3500580, GSM3500581, GSM3500582, GSM3500583, GSM5216969, GSM5216970, GSM5216971, GSM5216972, GSM5216973, GSM5216974
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| Series (6)
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| GSE90562 |
The distinct roles of class I and II RPD3-like histone deacetylases in salinity stress response |
| GSE106154 |
Genome-wide identification of SUPPRESSOR OF GAMMA RESPONSE 1-regulated genes in Arabidopsis |
| GSE106418 |
Genome-wide identification of SUPPRESSOR OF GAMMA RESPONSE 1-regulated and 1 (SOG1)-target genes in Arabidopsis |
| GSE121225 |
Transcriptome analysis of the hierarchical response of HDAC proteins that respond in an antagonistic manner to salinity stress |
| GSE123315 |
Transcriptomic analysis of Arabidopsis anac044anac085 and sog1 mutnat under DNA damage condition. |
| GSE171036 |
Transcriptome analysis of Arabidopis seedlings grown on MS medium with and without ethanol |
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| Relations |
| Alternative to |
GPL19830 |
| Data table header descriptions |
| ID |
Agilent feature number |
| COL |
Column |
| ROW |
Row |
| NAME |
NAME |
| SPOT_ID |
Spot identifier |
| CONTROL_TYPE |
Control type |
| CHROMOSOMAL_LOCATION |
Chromosomal Location |
| SEQUENCE |
Sequence |
| ORF |
ORF Name |
| Data table |
| ID |
COL |
ROW |
NAME |
SPOT_ID |
CONTROL_TYPE |
CHROMOSOMAL_LOCATION |
SEQUENCE |
ORF |
| 1 |
192 |
328 |
GE_BrightCorner |
GE_BrightCorner |
pos |
|
|
|
| 2 |
192 |
326 |
DarkCorner |
DarkCorner |
pos |
|
|
|
| 3 |
192 |
324 |
DarkCorner |
DarkCorner |
pos |
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|
| 4 |
192 |
322 |
AT3G30655 |
AT3G30655 |
FALSE |
unmapped |
TCAACATCAAGGACGTCCCAAATGATGAAGTTATTCCTATGGTTAGAAAAGAAGGATGTG |
AT3G30655 |
| 5 |
192 |
320 |
AT1G47317 |
AT1G47317 |
FALSE |
unmapped |
CCTGATCCTCATCAATGCCCTAAATATGATTATTATGCATGCCTTAATAATGGAGAATGT |
AT1G47317 |
| 6 |
192 |
318 |
AT2G15815 |
AT2G15815 |
FALSE |
unmapped |
TAGTCAAACTCGACGAGCAAGAGAAAGACAAGCTTGAAAATGAAGTTGTGATAGCTAATG |
AT2G15815 |
| 7 |
192 |
316 |
AT_2_-_0_3373939-3374124 |
AT_2_-_0_3373939-3374124 |
FALSE |
unmapped |
GAAGCTAGTCAAGCGATTAAACAAAGTAATAAACCTTTCGAGTTCTTGATTTACGGCTAG |
|
| 8 |
192 |
314 |
NA |
NA |
ignore |
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|
|
| 9 |
192 |
312 |
Group6436 |
Group6436 |
FALSE |
unmapped |
TACGTTGGCTGTTTCGGCTTCTCAAAACCGTACTCGTCTTCTTCATTTAGAACCGATCTT |
|
| 10 |
192 |
310 |
AT1G35745 |
AT1G35745 |
FALSE |
unmapped |
GGACCAGAGCCGGATATAGACAACAAGAATTCCTTCGAGAGAATGAAGAAGAATTAGAAG |
AT1G35745 |
| 11 |
192 |
308 |
AT2G39340 |
AT2G39340 |
FALSE |
unmapped |
GGAAATCCTTATTCTTCTATAAGATTTTGAGATAAGGGAATCCAGGAGACATACCTCTTT |
AT2G39340 |
| 12 |
192 |
306 |
Group786 |
Group786 |
FALSE |
unmapped |
TGATGAATGTGACGCTGAAGGCGATTTGTTCTTCATCCATATTGCGTTGCCGACCTCAAA |
|
| 13 |
192 |
304 |
AT1G31350 |
AT1G31350 |
FALSE |
unmapped |
AGTGTCATCTTGTCGTTATTTTTTAATACCTGCACTGCAAATGAAAAGACAATACACGTC |
AT1G31350 |
| 14 |
192 |
302 |
AT4G21215 |
AT4G21215 |
FALSE |
unmapped |
GTTGAAAGTTTCTCTAATGTCATCCACAAAGACTTCTCTTCTTCTAGTCCAAGAATTACT |
AT4G21215 |
| 15 |
192 |
300 |
AT5G05850 |
AT5G05850 |
FALSE |
unmapped |
TTCCAAAGTGATCTTCAGTCTTGAGTTTTCCTGCCGCTGCTTCTCTGTTTCGGTATATAG |
AT5G05850 |
| 16 |
192 |
298 |
CUFF.67031 |
CUFF.67031 |
FALSE |
unmapped |
TTTCAATCGGAATCTCCATTCCTAAATCACCTCTAGCCACCATGAATGCATCAGAATATT |
|
| 17 |
192 |
296 |
AT5G06310 |
AT5G06310 |
FALSE |
unmapped |
CAGAAGATTCCGCATTTTTGATACTTGGATCAATGCTTCATGAGACAATCATAATGCTAA |
AT5G06310 |
| 18 |
192 |
294 |
NA |
NA |
ignore |
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|
| 19 |
192 |
292 |
AT_5_+_2_5664939-5665040 |
AT_5_+_2_5664939-5665040 |
FALSE |
unmapped |
AATAGAACGGTTGGAGAGCCGGCCAAGCTTATGGATAATATATTTATATATGGAGAATGA |
|
| 20 |
192 |
290 |
AT5G64310 |
AT5G64310 |
FALSE |
unmapped |
CGGCTGATCCTATGCGCGTTTGTATCTATCCAATATTTATCTATCTATATGATTTATCAG |
AT5G64310 |
Total number of rows: 62976
Table truncated, full table size 6591 Kbytes.
| Supplementary data files not provided |
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