NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL22817 Query DataSets for GPL22817
Status Public on Dec 19, 2016
Title [FelGene-1_0] Feline Gene 1.0 ST Array [transcript (gene) version]
Technology type in situ oligonucleotide
Distribution commercial
Organism Felis catus
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
 
Description Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at
http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

FelGene-1_0-st-v1.na36.felcat8.transcript.csv
#%create_date=Wed Jun 1 21:09:02 2016 PDT
#%chip_type=FelGene-1_0-st-v1
#%lib_set_name=FelGene-1_0-st
#%lib_set_version=v1
#%genome-species=Felis catus
#%genome-version=felcat8
#%genome-version-ucsc=felcat8
#%genome-version-create_date=2014-11-01
#%genome-lifted-method=liftOver
#%genome-lifted_from-species=Felis catus
#%genome-lifted_from-version-ucsc=felcat3
#%netaffx-annotation-date=2016-03-15
#%netaffx-annotation-netaffx-build=36
 
Web link http://www.affymetrix.com/support/technical/byproduct.affx?product=modelorg_1_1_array
http://www.affymetrix.com/support/technical/libraryfilesmain.affx
Submission date Dec 19, 2016
Last update date Dec 19, 2016
Organization Affymetrix, Inc.
E-mail(s) geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (6) GSM2433024, GSM2433025, GSM2433026, GSM2433027, GSM2433028, GSM2433029
Series (1)
GSE92586 Expression profiling feline peripheral blood monocytes identifies a transcriptional signature associated with type two diabetes mellitus

Data table header descriptions
ID transcript_cluster_id
probeset_id Unique identifier for the probe set.
seqname chromosome number
strand (+|-)
start (integer). Coordinates are standard 1-based (length=stop-start+1).
stop (integer). Coordinates are standard 1-based (length=stop-start+1).
total_probes Total number of probes contained by this transcript cluster.
gene_assignment Gene name(s) for each assigned mRNA for mRNAs that corresponds to known genes. (multipart)
mrna_assignment Public mRNAs that should be detected by this probe set based on sequence alignment determined at the time of the current NetAffx annotation update. (multipart).
swissprot
GO_biological_process
GO_cellular_component
GO_molecular_function
protein_domains
crosshyb_type
category Array design category of the transcript cluster
GB_ACC
SPOT_ID genomic location of the transcript cluster in the version of the genome assembly used at annotation time. Coordinates are standard 1-based (length=stop-start+1).

Data table
ID probeset_id seqname strand start stop total_probes gene_assignment mrna_assignment swissprot GO_biological_process GO_cellular_component GO_molecular_function protein_domains crosshyb_type category GB_ACC SPOT_ID
14515000 14515000 chrC1 + 370421 377611 26 XM_011284397 // SCNN1D // sodium channel, non voltage gated 1 delta subunit // --- // 101083756 XM_011284397 // RefSeq // PREDICTED: Felis catus sodium channel, non voltage gated 1 delta subunit (SCNN1D), mRNA. // chrC1 // 100 // 81 // 21 // 21 // 0 /// ENSFCAT00000007614 // ENSEMBL // sodium channel, non voltage gated 1 delta subunit [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 95 // 77 // 19 // 20 // 0 /// GENSCAN00000032799 // ENSEMBL // cdna:genscan scaffold:Felis_catus_6.2:JH408690.1:368758:372863:1 transcript_biotype:protein_coding // chrC1 // 100 // 77 // 20 // 20 // 0 ENSFCAT00000007614 // M3W812 ENSFCAT00000007614 // GO:0006810 // transport // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0006811 // ion transport // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0006814 // sodium ion transport // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0035725 // sodium ion transmembrane transport // inferred from electronic annotation ENSFCAT00000007614 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0016020 // membrane // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0015629 // actin cytoskeleton // inferred from electronic annotation ENSFCAT00000007614 // GO:0005272 // sodium channel activity // inferred from electronic annotation /// ENSFCAT00000007614 // GO:0015280 // ligand-gated sodium channel activity // inferred from electronic annotation ENSFCAT00000007614 // Pfam // IPR001873 // Na+ channel, amiloride-sensitive 1 main XM_011284397
14515015 14515015 chrC1 - 318724 328846 28 XM_004001132 // SDF4 // stromal cell derived factor 4 // --- // 101101374 /// ENSFCAT00000007608 // SDF4 // stromal cell derived factor 4 // --- // 101101374 XM_004001132 // RefSeq // PREDICTED: Felis catus stromal cell derived factor 4 (SDF4), mRNA. // chrC1 // 100 // 100 // 28 // 28 // 0 /// ENSFCAT00000007608 // ENSEMBL // stromal cell derived factor 4 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 100 // 100 // 28 // 28 // 0 /// GENSCAN00000032826 // ENSEMBL // cdna:genscan scaffold:Felis_catus_6.2:JH408690.1:307353:343235:-1 transcript_biotype:protein_coding // chrC1 // 100 // 96 // 27 // 27 // 0 ENSFCAT00000007608 // M3W808 ENSFCAT00000007608 // GO:0045444 // fat cell differentiation // inferred from electronic annotation ENSFCAT00000007608 // GO:0016020 // membrane // inferred from electronic annotation /// ENSFCAT00000007608 // GO:0005794 // Golgi apparatus // inferred from electronic annotation /// ENSFCAT00000007608 // GO:0005796 // Golgi lumen // inferred from electronic annotation /// ENSFCAT00000007608 // GO:0070062 // extracellular exosome // inferred from electronic annotation ENSFCAT00000007608 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000007608 // GO:0005509 // calcium ion binding // inferred from electronic annotation --- 1 main XM_004001132
14515022 14515022 chrC1 - 379933 384522 31 XM_006944217 // ACAP3 // ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 // --- // 101084014 /// ENSFCAT00000007617 // ACAP3 // ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 // --- // 101084014 /// ENSFCAT00000029104 // ACAP3 // ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 // --- // 101084014 XM_006944217 // RefSeq // PREDICTED: Felis catus ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 (ACAP3), partial mRNA. // chrC1 // 100 // 84 // 26 // 26 // 0 /// ENSFCAT00000007617 // ENSEMBL // ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 100 // 84 // 26 // 26 // 0 /// ENSFCAT00000029104 // ENSEMBL // ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 100 // 84 // 26 // 26 // 0 /// GENSCAN00000032828 // ENSEMBL // cdna:genscan scaffold:Felis_catus_6.2:JH408690.1:375227:388666:-1 transcript_biotype:protein_coding // chrC1 // 100 // 84 // 26 // 26 // 0 ENSFCAT00000007617 // M3W814 /// ENSFCAT00000029104 // M3X995 ENSFCAT00000007617 // GO:0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// ENSFCAT00000029104 // GO:0043547 // positive regulation of GTPase activity // inferred from electronic annotation --- ENSFCAT00000007617 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000007617 // GO:0005096 // GTPase activator activity // inferred from electronic annotation /// ENSFCAT00000029104 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000029104 // GO:0005096 // GTPase activator activity // inferred from electronic annotation ENSFCAT00000007617 // Pfam // IPR001164 // Arf GTPase activating protein /// ENSFCAT00000007617 // Pfam // IPR001849 // Pleckstrin homology domain /// ENSFCAT00000007617 // Pfam // IPR002110 // Ankyrin repeat /// ENSFCAT00000029104 // Pfam // IPR001164 // Arf GTPase activating protein /// ENSFCAT00000029104 // Pfam // IPR001849 // Pleckstrin homology domain /// ENSFCAT00000029104 // Pfam // IPR002110 // Ankyrin repeat 1 main XM_006944217
14515035 14515035 chrC2 + 107679535 107688940 24 XM_006936309 // VEPH1 // ventricular zone expressed PH domain-containing 1 // --- // 101085147 /// XM_006936310 // VEPH1 // ventricular zone expressed PH domain-containing 1 // --- // 101085147 /// ENSFCAT00000015594 // VEPH1 // ventricular zone expressed PH domain-containing 1 // --- // 101085147 XM_006936309 // RefSeq // PREDICTED: Felis catus ventricular zone expressed PH domain-containing 1 (VEPH1), transcript variant X1, mRNA. // chrC2 // 83 // 100 // 20 // 24 // 0 /// XM_006936310 // RefSeq // PREDICTED: Felis catus ventricular zone expressed PH domain-containing 1 (VEPH1), transcript variant X2, mRNA. // chrC2 // 83 // 100 // 20 // 24 // 0 /// ENSFCAT00000015594 // ENSEMBL // ventricular zone expressed PH domain-containing 1 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC2 // 83 // 100 // 20 // 24 // 0 /// GENSCAN00000026552 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:C2:106558494:106597295:1 transcript_biotype:protein_coding // chrC2 // 83 // 100 // 20 // 24 // 0 XM_006936309 // M3WMW3 /// ENSFCAT00000015594 // M3WMW3 --- --- --- ENSFCAT00000015594 // Pfam // IPR001849 // Pleckstrin homology domain 1 main XM_006936309
14515038 14515038 chrA2 - 84261364 84261452 23 XM_003982707 // SEMA3C // sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C // --- // 101094086 /// ENSFCAT00000025021 // SEMA3C // sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C // --- // 101094086 XM_003982707 // RefSeq // PREDICTED: Felis catus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C (SEMA3C), mRNA. // chrA2 // 100 // 100 // 23 // 23 // 0 /// ENSFCAT00000025021 // ENSEMBL // sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrA2 // 100 // 100 // 23 // 23 // 0 XM_003982707 // M3WV31 /// ENSFCAT00000025021 // M3WV31 XM_003982707 // GO:0001755 // neural crest cell migration // --- /// XM_003982707 // GO:0001755 // neural crest cell migration // inferred from electronic annotation /// XM_003982707 // GO:0001756 // somitogenesis // inferred from electronic annotation /// XM_003982707 // GO:0001974 // blood vessel remodeling // inferred from electronic annotation /// XM_003982707 // GO:0003151 // outflow tract morphogenesis // inferred from electronic annotation /// XM_003982707 // GO:0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// XM_003982707 // GO:0003350 // pulmonary myocardium development // inferred from electronic annotation /// XM_003982707 // GO:0007411 // axon guidance // inferred from electronic annotation /// XM_003982707 // GO:0007507 // heart development // inferred from electronic annotation /// XM_003982707 // GO:0009791 // post-embryonic development // inferred from electronic annotation /// XM_003982707 // GO:0021915 // neural tube development // inferred from electronic annotation /// XM_003982707 // GO:0030335 // positive regulation of cell migration // --- /// XM_003982707 // GO:0048843 // negative regulation of axon extension involved in axon guidance // --- /// XM_003982707 // GO:0050919 // negative chemotaxis // --- /// XM_003982707 // GO:0060174 // limb bud formation // inferred from electronic annotation /// XM_003982707 // GO:0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// XM_003982707 // GO:0071526 // semaphorin-plexin signaling pathway // --- /// ENSFCAT00000025021 // GO:0001755 // neural crest cell migration // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0001756 // somitogenesis // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0001974 // blood vessel remodeling // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0003151 // outflow tract morphogenesis // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0003350 // pulmonary myocardium development // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0007411 // axon guidance // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0007507 // heart development // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0009791 // post-embryonic development // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0021915 // neural tube development // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0060174 // limb bud formation // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0001755 // neural crest cell migration // --- /// ENSFCAT00000025021 // GO:0030335 // positive regulation of cell migration // --- /// ENSFCAT00000025021 // GO:0048843 // negative regulation of axon extension involved in axon guidance // --- /// ENSFCAT00000025021 // GO:0050919 // negative chemotaxis // --- /// ENSFCAT00000025021 // GO:0071526 // semaphorin-plexin signaling pathway // --- XM_003982707 // GO:0005615 // extracellular space // --- /// XM_003982707 // GO:0005615 // extracellular space // inferred from electronic annotation /// XM_003982707 // GO:0070062 // extracellular exosome // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0005615 // extracellular space // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0070062 // extracellular exosome // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0005615 // extracellular space // --- XM_003982707 // GO:0030215 // semaphorin receptor binding // --- /// XM_003982707 // GO:0030215 // semaphorin receptor binding // inferred from electronic annotation /// XM_003982707 // GO:0038191 // neuropilin binding // --- /// XM_003982707 // GO:0045499 // chemorepellent activity // --- /// ENSFCAT00000025021 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0030215 // semaphorin receptor binding // inferred from electronic annotation /// ENSFCAT00000025021 // GO:0030215 // semaphorin receptor binding // --- /// ENSFCAT00000025021 // GO:0038191 // neuropilin binding // --- /// ENSFCAT00000025021 // GO:0045499 // chemorepellent activity // --- ENSFCAT00000025021 // Pfam // IPR001627 // Sema domain /// ENSFCAT00000025021 // Pfam // IPR013098 // Immunoglobulin I-set 1 main XM_003982707
14515040 14515040 chrA1 + 25874283 25875059 25 XM_003980405 // KCTD4 // potassium channel tetramerization domain containing 4 // --- // 101084080 /// ENSFCAT00000002106 // KCTD4 // potassium channel tetramerization domain containing 4 // --- // 101084080 XM_003980405 // RefSeq // PREDICTED: Felis catus potassium channel tetramerization domain containing 4 (KCTD4), mRNA. // chrA1 // 100 // 100 // 25 // 25 // 0 /// ENSFCAT00000002106 // ENSEMBL // potassium channel tetramerization domain containing 4 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrA1 // 100 // 100 // 25 // 25 // 0 /// GENSCAN00000003587 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:A1:25465040:25465819:1 transcript_biotype:protein_coding // chrA1 // 100 // 100 // 25 // 25 // 0 XM_003980405 // M3VXX0 /// ENSFCAT00000002106 // M3VXX0 XM_003980405 // GO:0051260 // protein homooligomerization // inferred from electronic annotation /// ENSFCAT00000002106 // GO:0051260 // protein homooligomerization // inferred from electronic annotation --- ENSFCAT00000002106 // GO:0005515 // protein binding // inferred from electronic annotation ENSFCAT00000002106 // Pfam // IPR003131 // Potassium channel tetramerisation-type BTB domain 1 main XM_003980405
14515042 14515042 chrA1 - 25917906 25919420 25 XM_003980404 // GTF2F2 // general transcription factor IIF, polypeptide 2, 30kDa // --- // 101083822 /// ENSFCAT00000002105 // GTF2F2 // general transcription factor IIF, polypeptide 2, 30kDa // --- // 101083822 XM_003980404 // RefSeq // PREDICTED: Felis catus general transcription factor IIF, polypeptide 2, 30kDa (GTF2F2), mRNA. // chrA1 // 100 // 100 // 25 // 25 // 0 /// ENSFCAT00000002105 // ENSEMBL // general transcription factor IIF, polypeptide 2, 30kDa [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrA1 // 100 // 100 // 25 // 25 // 0 XM_003980404 // M3VXW9 /// ENSFCAT00000002105 // M3VXW9 XM_003980404 // GO:0006351 // transcription, DNA-templated // inferred from electronic annotation /// XM_003980404 // GO:0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// XM_003980404 // GO:0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// XM_003980404 // GO:0006367 // transcription initiation from RNA polymerase II promoter // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0006351 // transcription, DNA-templated // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0006355 // regulation of transcription, DNA-templated // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0006367 // transcription initiation from RNA polymerase II promoter // inferred from electronic annotation XM_003980404 // GO:0005634 // nucleus // inferred from electronic annotation /// XM_003980404 // GO:0005674 // transcription factor TFIIF complex // inferred from electronic annotation /// XM_003980404 // GO:0015630 // microtubule cytoskeleton // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0005674 // transcription factor TFIIF complex // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0015630 // microtubule cytoskeleton // inferred from electronic annotation XM_003980404 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// XM_003980404 // GO:0003677 // DNA binding // inferred from electronic annotation /// XM_003980404 // GO:0003824 // catalytic activity // inferred from electronic annotation /// XM_003980404 // GO:0004386 // helicase activity // inferred from electronic annotation /// XM_003980404 // GO:0005524 // ATP binding // inferred from electronic annotation /// XM_003980404 // GO:0016787 // hydrolase activity // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0003677 // DNA binding // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0003824 // catalytic activity // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0004386 // helicase activity // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0005524 // ATP binding // inferred from electronic annotation /// ENSFCAT00000002105 // GO:0016787 // hydrolase activity // inferred from electronic annotation ENSFCAT00000002105 // Pfam // IPR003196 // Transcription initiation factor IIF, beta subunit /// ENSFCAT00000002105 // Pfam // IPR003196 // Transcription initiation factor IIF, beta subunit 1 main XM_003980404
14515044 14515044 chrA1 - 26040694 26041435 23 XM_006927303 // GPALPP1 // GPALPP motifs containing 1 // --- // 101084336 /// XM_006927304 // GPALPP1 // GPALPP motifs containing 1 // --- // 101084336 /// ENSFCAT00000031814 // GPALPP1 // GPALPP motifs containing 1 // --- // 101084336 XM_006927303 // RefSeq // PREDICTED: Felis catus GPALPP motifs containing 1 (GPALPP1), transcript variant X1, mRNA. // chrA1 // 100 // 100 // 23 // 23 // 0 /// XM_006927304 // RefSeq // PREDICTED: Felis catus GPALPP motifs containing 1 (GPALPP1), transcript variant X2, mRNA. // chrA1 // 100 // 100 // 23 // 23 // 0 /// ENSFCAT00000031814 // ENSEMBL // GPALPP motifs containing 1 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrA1 // 100 // 100 // 23 // 23 // 0 /// GENSCAN00000003583 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:A1:25490897:25642193:-1 transcript_biotype:protein_coding // chrA1 // 100 // 100 // 23 // 23 // 0 XM_006927303 // M3XGC0 /// XM_006927304 // M3XGC0 /// ENSFCAT00000031814 // M3XGC0 --- --- --- ENSFCAT00000031814 // Pfam // IPR022226 // Protein of unknown function DUF3752 1 main XM_006927303
14515047 14515047 chrA2 - 120458784 120458942 25 XM_006929286 // SCRN1 // secernin 1 // --- // 101086217 /// XM_006929287 // SCRN1 // secernin 1 // --- // 101086217 /// ENSFCAT00000031281 // SCRN1 // secernin 1 // --- // 101086217 XM_006929286 // RefSeq // PREDICTED: Felis catus secernin 1 (SCRN1), transcript variant X1, mRNA. // chrA2 // 100 // 100 // 25 // 25 // 0 /// XM_006929287 // RefSeq // PREDICTED: Felis catus secernin 1 (SCRN1), transcript variant X2, mRNA. // chrA2 // 100 // 100 // 25 // 25 // 0 /// ENSFCAT00000031281 // ENSEMBL // secernin 1 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrA2 // 100 // 100 // 25 // 25 // 0 /// GENSCAN00000013923 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:A2:121586580:121645555:-1 transcript_biotype:protein_coding // chrA2 // 100 // 100 // 25 // 25 // 0 XM_006929287 // M3X3B0 /// ENSFCAT00000031281 // M3X3B0 XM_006929287 // GO:0006508 // proteolysis // inferred from electronic annotation /// ENSFCAT00000031281 // GO:0006508 // proteolysis // inferred from electronic annotation XM_006929287 // GO:0005634 // nucleus // inferred from electronic annotation /// XM_006929287 // GO:0031965 // nuclear membrane // inferred from electronic annotation /// ENSFCAT00000031281 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSFCAT00000031281 // GO:0031965 // nuclear membrane // inferred from electronic annotation XM_006929287 // GO:0016805 // dipeptidase activity // inferred from electronic annotation /// ENSFCAT00000031281 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000031281 // GO:0016805 // dipeptidase activity // inferred from electronic annotation ENSFCAT00000031281 // Pfam // IPR005322 // Peptidase C69, dipeptidase A 1 main XM_006929286
14515049 14515049 --- --- 0 0 28 --- XM_003995141 // RefSeq // PREDICTED: Felis catus elongator acetyltransferase complex subunit 2 (ELP2), mRNA. // --- // 79 // 79 // 22 // 28 // 1 /// ENSFCAT00000030172 // ENSEMBL // elongator acetyltransferase complex subunit 2 [gene_biotype:protein_coding transcript_biotype:protein_coding] // --- // 79 // 79 // 22 // 28 // 1 /// GENSCAN00000013077 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:D3:58621075:58665888:1 transcript_biotype:protein_coding // --- // 46 // 46 // 13 // 28 // 1 --- --- --- --- --- 1 main XM_003995141
14515054 14515054 chrB2 + 113208024 113208225 25 XM_003986524 // RNF217 // ring finger protein 217 // --- // 101081895 XM_003986524 // RefSeq // PREDICTED: Felis catus ring finger protein 217 (RNF217), mRNA. // chrB2 // 100 // 100 // 25 // 25 // 0 /// ENSFCAT00000003319 // ENSEMBL // ring finger protein 217 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrB2 // 100 // 100 // 25 // 25 // 0 /// GENSCAN00000026151 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:B2:114688269:114859189:1 transcript_biotype:protein_coding // chrB2 // 100 // 100 // 25 // 25 // 0 ENSFCAT00000003319 // M3W045 ENSFCAT00000003319 // GO:0016567 // protein ubiquitination // inferred from electronic annotation /// ENSFCAT00000003319 // GO:0000209 // protein polyubiquitination // --- /// ENSFCAT00000003319 // GO:0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // --- /// ENSFCAT00000003319 // GO:0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // --- ENSFCAT00000003319 // GO:0000151 // ubiquitin ligase complex // --- /// ENSFCAT00000003319 // GO:0005737 // cytoplasm // --- /// ENSFCAT00000003319 // GO:0016020 // membrane // inferred from electronic annotation /// ENSFCAT00000003319 // GO:0016021 // integral component of membrane // inferred from electronic annotation ENSFCAT00000003319 // GO:0004842 // ubiquitin-protein transferase activity // inferred from electronic annotation /// ENSFCAT00000003319 // GO:0046872 // metal ion binding // inferred from electronic annotation /// ENSFCAT00000003319 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSFCAT00000003319 // GO:0031624 // ubiquitin conjugating enzyme binding // --- /// ENSFCAT00000003319 // GO:0061630 // ubiquitin protein ligase activity // --- ENSFCAT00000003319 // Pfam // IPR002867 // IBR domain /// ENSFCAT00000003319 // Pfam // IPR002867 // IBR domain 1 main XM_003986524
14515056 14515056 chrE2 + 1734688 1736001 25 XM_011289529 // DUXA // double homeobox A // --- // 101100100 XM_011289529 // RefSeq // PREDICTED: Felis catus double homeobox A (DUXA), mRNA. // chrE2 // 100 // 100 // 25 // 25 // 0 /// ENSFCAT00000007547 // ENSEMBL // double homeobox A [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrE2 // 100 // 100 // 25 // 25 // 0 /// GENSCAN00000023808 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:E2:1575311:1763713:1 transcript_biotype:protein_coding // chrE2 // 100 // 100 // 25 // 25 // 0 ENSFCAT00000007547 // M3W7W6 --- ENSFCAT00000007547 // GO:0005634 // nucleus // inferred from electronic annotation ENSFCAT00000007547 // GO:0003677 // DNA binding // inferred from electronic annotation ENSFCAT00000007547 // Pfam // IPR001356 // Homeobox domain /// ENSFCAT00000007547 // Pfam // IPR001356 // Homeobox domain 1 main XM_011289529
14515060 14515060 chrA3 + 80776816 80776955 21 XM_003984038 // EHBP1 // EH domain binding protein 1 // --- // 101081286 /// XM_006930128 // EHBP1 // EH domain binding protein 1 // --- // 101081286 /// XM_006930130 // EHBP1 // EH domain binding protein 1 // --- // 101081286 /// XM_006930131 // EHBP1 // EH domain binding protein 1 // --- // 101081286 /// XM_011281005 // EHBP1 // EH domain binding protein 1 // --- // 101081286 /// XM_011281006 // EHBP1 // EH domain binding protein 1 // --- // 101081286 /// ENSFCAT00000023101 // EHBP1 // EH domain binding protein 1 // --- // 101081286 XM_003984038 // RefSeq // PREDICTED: Felis catus EH domain binding protein 1 (EHBP1), transcript variant X2, mRNA. // chrA3 // 86 // 100 // 18 // 21 // 0 /// XM_006930128 // RefSeq // PREDICTED: Felis catus EH domain binding protein 1 (EHBP1), transcript variant X1, mRNA. // chrA3 // 86 // 100 // 18 // 21 // 0 /// XM_006930130 // RefSeq // PREDICTED: Felis catus EH domain binding protein 1 (EHBP1), transcript variant X4, mRNA. // chrA3 // 86 // 100 // 18 // 21 // 0 /// XM_006930131 // RefSeq // PREDICTED: Felis catus EH domain binding protein 1 (EHBP1), transcript variant X5, mRNA. // chrA3 // 86 // 100 // 18 // 21 // 0 /// XM_011281005 // RefSeq // PREDICTED: Felis catus EH domain binding protein 1 (EHBP1), transcript variant X3, mRNA. // chrA3 // 86 // 100 // 18 // 21 // 0 /// XM_011281006 // RefSeq // PREDICTED: Felis catus EH domain binding protein 1 (EHBP1), transcript variant X6, mRNA. // chrA3 // 86 // 100 // 18 // 21 // 0 /// ENSFCAT00000023101 // ENSEMBL // EH domain binding protein 1 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrA3 // 86 // 100 // 18 // 21 // 0 /// GENSCAN00000021311 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:A3:82907308:83138256:1 transcript_biotype:protein_coding // chrA3 // 86 // 100 // 18 // 21 // 0 XM_003984038 // M3XA60 /// XM_006930128 // M3XA60 /// XM_011281005 // M3XA60 /// ENSFCAT00000023101 // M3XA60 --- XM_003984038 // GO:0005737 // cytoplasm // inferred from electronic annotation /// XM_003984038 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_006930128 // GO:0005737 // cytoplasm // inferred from electronic annotation /// XM_006930128 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_011281005 // GO:0005737 // cytoplasm // inferred from electronic annotation /// XM_011281005 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSFCAT00000023101 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSFCAT00000023101 // GO:0005737 // cytoplasm // inferred from electronic annotation ENSFCAT00000023101 // GO:0005515 // protein binding // inferred from electronic annotation ENSFCAT00000023101 // Pfam // IPR001715 // Calponin homology domain /// ENSFCAT00000023101 // Pfam // IPR022613 // Calmodulin-regulated spectrin-associated protein, CH domain /// ENSFCAT00000023101 // Pfam // IPR022735 // Domain of unknown function DUF3585 1 main XM_003984038
14515062 14515062 chrD1 + 100814525 100815465 20 XM_003993306 // LOC101092397 // olfactory receptor 4P4-like // --- // 101092397 /// ENSFCAT00000025364 // LOC101092397 // olfactory receptor 4P4-like // --- // 101092397 XM_003993306 // RefSeq // PREDICTED: Felis catus olfactory receptor 4P4-like (LOC101092397), mRNA. // chrD1 // 100 // 45 // 9 // 9 // 0 /// ENSFCAT00000025364 // ENSEMBL // Olfactory receptor [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrD1 // 100 // 45 // 9 // 9 // 0 /// GENSCAN00000004203 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:D1:102524097:102525023:1 transcript_biotype:protein_coding // chrD1 // 100 // 45 // 9 // 9 // 0 XM_003993306 // M3X8X9 /// ENSFCAT00000025364 // M3X8X9 XM_003993306 // GO:0007165 // signal transduction // inferred from electronic annotation /// XM_003993306 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_003993306 // GO:0007608 // sensory perception of smell // inferred from electronic annotation /// XM_003993306 // GO:0050896 // response to stimulus // inferred from electronic annotation /// XM_003993306 // GO:0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0007165 // signal transduction // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0007608 // sensory perception of smell // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0050896 // response to stimulus // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation XM_003993306 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_003993306 // GO:0016020 // membrane // inferred from electronic annotation /// XM_003993306 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0016020 // membrane // inferred from electronic annotation XM_003993306 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// XM_003993306 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// XM_003993306 // GO:0004984 // olfactory receptor activity // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// ENSFCAT00000025364 // GO:0004984 // olfactory receptor activity // inferred from electronic annotation ENSFCAT00000025364 // Pfam // IPR000276 // G protein-coupled receptor, rhodopsin-like 1 main XM_003993306
14515065 14515065 chrB4 - 120565697 120565772 16 XM_011284168 // ANKS1B // ankyrin repeat and sterile alpha motif domain containing 1B // --- // 101086662 /// ENSFCAT00000010811 // ANKS1B // ankyrin repeat and sterile alpha motif domain containing 1B // --- // 101086662 XM_011284168 // RefSeq // PREDICTED: Felis catus ankyrin repeat and sterile alpha motif domain containing 1B (ANKS1B), transcript variant X5, mRNA. // chrB4 // 100 // 100 // 16 // 16 // 0 /// ENSFCAT00000010811 // ENSEMBL // ankyrin repeat and sterile alpha motif domain containing 1B [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrB4 // 100 // 100 // 16 // 16 // 0 /// GENSCAN00000036311 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:B4:122553554:122803143:-1 transcript_biotype:protein_coding // chrB4 // 100 // 100 // 16 // 16 // 0 ENSFCAT00000010811 // M3WDZ2 --- --- ENSFCAT00000010811 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000010811 // GO:0046875 // ephrin receptor binding // inferred from electronic annotation ENSFCAT00000010811 // Pfam // IPR001660 // Sterile alpha motif domain /// ENSFCAT00000010811 // Pfam // IPR001660 // Sterile alpha motif domain /// ENSFCAT00000010811 // Pfam // IPR001660 // Sterile alpha motif domain /// ENSFCAT00000010811 // Pfam // IPR001660 // Sterile alpha motif domain /// ENSFCAT00000010811 // Pfam // IPR002110 // Ankyrin repeat /// ENSFCAT00000010811 // Pfam // IPR002110 // Ankyrin repeat /// ENSFCAT00000010811 // Pfam // IPR002110 // Ankyrin repeat /// ENSFCAT00000010811 // Pfam // IPR002110 // Ankyrin repeat /// ENSFCAT00000010811 // Pfam // IPR006020 // PTB/PI domain /// ENSFCAT00000010811 // Pfam // IPR013625 // Tensin phosphotyrosine-binding domain 1 main XM_011284168
14515069 14515069 chrD4 + 15303077 15310213 28 NM_001009857 // ANXA1 // annexin A1 // --- // 493875 /// XM_006939090 // ANXA1 // annexin A1 // --- // 493875 /// ENSFCAT00000015267 // ANXA1 // annexin A1 // --- // 493875 /// AY667156 // ANXA1 // annexin A1 // --- // 493875 NM_001009857 // RefSeq // Felis catus annexin A1 (ANXA1), mRNA. // chrD4 // 81 // 57 // 13 // 16 // 0 /// XM_006939090 // RefSeq // PREDICTED: Felis catus annexin A1 (ANXA1), transcript variant X1, mRNA. // chrD4 // 100 // 100 // 28 // 28 // 0 /// ENSFCAT00000015267 // ENSEMBL // annexin A1 [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrD4 // 100 // 100 // 28 // 28 // 0 /// AY667156 // GenBank // Felis catus clone E78 lipocortin-1 mRNA, complete cds. // chrD4 // 81 // 57 // 13 // 16 // 0 /// GENSCAN00000021639 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:D4:15211693:15271166:1 transcript_biotype:protein_coding // chrD4 // 100 // 86 // 24 // 24 // 0 NM_001009857 // Q6BCI9 /// ENSFCAT00000015267 // M3WM96 /// AY667156 // Q6BCI9 NM_001009857 // GO:0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0001780 // neutrophil homeostasis // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0007165 // signal transduction // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0014839 // myoblast migration involved in skeletal muscle regeneration // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0018149 // peptide cross-linking // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0030216 // keratinocyte differentiation // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0031340 // positive regulation of vesicle fusion // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0033031 // positive regulation of neutrophil apoptotic process // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0042127 // regulation of cell proliferation // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0050482 // arachidonic acid secretion // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0097350 // neutrophil clearance // inferred from electronic annotation /// ENSFCAT00000015267 // GO:1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// ENSFCAT00000015267 // GO:2000483 // negative regulation of interleukin-8 secretion // inferred from electronic annotation /// AY667156 // GO:0043086 // negative regulation of catalytic activity // inferred from electronic annotation ENSFCAT00000015267 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0001533 // cornified envelope // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005615 // extracellular space // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005768 // endosome // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005925 // focal adhesion // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0009986 // cell surface // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0031982 // vesicle // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0042383 // sarcolemma // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0070062 // extracellular exosome // inferred from electronic annotation NM_001009857 // GO:0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// NM_001009857 // GO:0005509 // calcium ion binding // inferred from electronic annotation /// NM_001009857 // GO:0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005509 // calcium ion binding // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0030674 // protein binding, bridging // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005198 // structural molecule activity // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0019834 // phospholipase A2 inhibitor activity // inferred from electronic annotation /// ENSFCAT00000015267 // GO:0048306 // calcium-dependent protein binding // inferred from electronic annotation /// AY667156 // GO:0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// AY667156 // GO:0005509 // calcium ion binding // inferred from electronic annotation /// AY667156 // GO:0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation ENSFCAT00000015267 // Pfam // IPR018502 // Annexin repeat /// ENSFCAT00000015267 // Pfam // IPR018502 // Annexin repeat /// ENSFCAT00000015267 // Pfam // IPR018502 // Annexin repeat 1 main NM_001009857
14515077 14515077 chrC1 - 203817982 203824294 24 XM_006935601 // DNPEP // aspartyl aminopeptidase // --- // 101096754 /// XM_006935602 // DNPEP // aspartyl aminopeptidase // --- // 101096754 /// XM_006935603 // DNPEP // aspartyl aminopeptidase // --- // 101096754 /// XM_006935604 // DNPEP // aspartyl aminopeptidase // --- // 101096754 /// ENSFCAT00000011258 // DNPEP // aspartyl aminopeptidase // --- // 101096754 XM_006935601 // RefSeq // PREDICTED: Felis catus aspartyl aminopeptidase (DNPEP), transcript variant X1, mRNA. // chrC1 // 100 // 92 // 22 // 22 // 0 /// XM_006935602 // RefSeq // PREDICTED: Felis catus aspartyl aminopeptidase (DNPEP), transcript variant X2, mRNA. // chrC1 // 100 // 100 // 24 // 24 // 0 /// XM_006935603 // RefSeq // PREDICTED: Felis catus aspartyl aminopeptidase (DNPEP), transcript variant X3, mRNA. // chrC1 // 100 // 92 // 22 // 22 // 0 /// XM_006935604 // RefSeq // PREDICTED: Felis catus aspartyl aminopeptidase (DNPEP), transcript variant X4, mRNA. // chrC1 // 100 // 92 // 22 // 22 // 0 /// ENSFCAT00000011258 // ENSEMBL // aspartyl aminopeptidase [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 100 // 92 // 22 // 22 // 0 /// GENSCAN00000042910 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:C1:203078098:203167629:-1 transcript_biotype:protein_coding // chrC1 // 100 // 92 // 22 // 22 // 0 ENSFCAT00000011258 // M3WER7 ENSFCAT00000011258 // GO:0006508 // proteolysis // inferred from electronic annotation ENSFCAT00000011258 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0005654 // nucleoplasm // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0072562 // blood microparticle // inferred from electronic annotation ENSFCAT00000011258 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0004177 // aminopeptidase activity // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0008237 // metallopeptidase activity // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0008233 // peptidase activity // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0046872 // metal ion binding // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSFCAT00000011258 // GO:0016787 // hydrolase activity // inferred from electronic annotation ENSFCAT00000011258 // Pfam // IPR001948 // Peptidase M18 /// ENSFCAT00000011258 // Pfam // IPR008007 // Peptidase M42 1 main XM_006935601
14515091 14515091 chrC1 - 203777879 203783462 23 XM_011285682 // RESP18 // regulated endocrine-specific protein 18 // --- // 101100906 XM_011285682 // RefSeq // PREDICTED: Felis catus regulated endocrine-specific protein 18 (RESP18), mRNA. // chrC1 // 100 // 78 // 18 // 18 // 0 /// GENSCAN00000042910 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:C1:203078098:203167629:-1 transcript_biotype:protein_coding // chrC1 // 92 // 52 // 11 // 12 // 0 --- --- --- --- --- 1 main XM_011285682
14515096 14515096 chrC1 - 203748940 203767464 29 XM_011285542 // PTPRN // protein tyrosine phosphatase, receptor type, N // --- // 101100657 /// XM_011285543 // PTPRN // protein tyrosine phosphatase, receptor type, N // --- // 101100657 /// ENSFCAT00000011256 // PTPRN // protein tyrosine phosphatase, receptor type, N // --- // 101100657 XM_011285542 // RefSeq // PREDICTED: Felis catus protein tyrosine phosphatase, receptor type, N (PTPRN), transcript variant X1, mRNA. // chrC1 // 100 // 100 // 29 // 29 // 0 /// XM_011285543 // RefSeq // PREDICTED: Felis catus protein tyrosine phosphatase, receptor type, N (PTPRN), transcript variant X2, mRNA. // chrC1 // 100 // 100 // 29 // 29 // 0 /// ENSFCAT00000011256 // ENSEMBL // protein tyrosine phosphatase, receptor type, N [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 100 // 100 // 29 // 29 // 0 /// GENSCAN00000042910 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:C1:203078098:203167629:-1 transcript_biotype:protein_coding // chrC1 // 100 // 90 // 26 // 26 // 0 ENSFCAT00000011256 // M3WER6 ENSFCAT00000011256 // GO:0000302 // response to reactive oxygen species // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0006470 // protein dephosphorylation // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0016311 // dephosphorylation // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0030073 // insulin secretion // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// ENSFCAT00000011256 // GO:1990502 // dense core granule maturation // inferred from electronic annotation ENSFCAT00000011256 // GO:0005623 // cell // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0016020 // membrane // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0016021 // integral component of membrane // inferred from electronic annotation ENSFCAT00000011256 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0016787 // hydrolase activity // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0016791 // phosphatase activity // inferred from electronic annotation /// ENSFCAT00000011256 // GO:0030507 // spectrin binding // inferred from electronic annotation ENSFCAT00000011256 // Pfam // IPR000242 // PTP type protein phosphatase /// ENSFCAT00000011256 // Pfam // IPR021613 // Protein-tyrosine phosphatase receptor IA-2 ectodomain 1 main XM_011285542
14515114 14515114 chrC1 - 203713579 203714550 12 XM_003991171 // TUBA4A // tubulin, alpha 4a // --- // 101095277 /// ENSFCAT00000030492 // TUBA4A // tubulin, alpha 4a // --- // 101095277 XM_003991171 // RefSeq // PREDICTED: Felis catus tubulin, alpha 4a (TUBA4A), mRNA. // chrC1 // 100 // 100 // 12 // 12 // 0 /// ENSFCAT00000030492 // ENSEMBL // tubulin, alpha 4a [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrC1 // 100 // 100 // 12 // 12 // 0 /// GENSCAN00000042941 // ENSEMBL // cdna:genscan chromosome:Felis_catus_6.2:C1:203042829:203045531:-1 transcript_biotype:protein_coding // chrC1 // 100 // 100 // 12 // 12 // 0 ENSFCAT00000030492 // M3X3G1 ENSFCAT00000030492 // GO:0007017 // microtubule-based process // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0008152 // metabolic process // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0051258 // protein polymerization // inferred from electronic annotation ENSFCAT00000030492 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0005856 // cytoskeleton // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0005874 // microtubule // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0043234 // protein complex // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0070062 // extracellular exosome // inferred from electronic annotation ENSFCAT00000030492 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0003924 // GTPase activity // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// ENSFCAT00000030492 // GO:0005525 // GTP binding // inferred from electronic annotation ENSFCAT00000030492 // Pfam // IPR003008 // Tubulin/FtsZ, GTPase domain /// ENSFCAT00000030492 // Pfam // IPR018316 // Tubulin/FtsZ, 2-layer sandwich domain 1 main XM_003991171

Total number of rows: 36007

Table truncated, full table size 77963 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap