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Platform GPL23614 Query DataSets for GPL23614
Status Public on Jun 01, 2020
Title Streptomyces_coelicolor_M145OA_NimbleGen 12×135k array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Streptomyces coelicolor
Manufacturer NimbleGen
Manufacture protocol NimbleGen Expression user’s guide. http://www.nimblegen.com/support/dna-microarray-support.html
 
Description For the total 7,768 genes from Streptomyces coelicolor M145-OA, 6 probes were designed for each sequence. 39 sequences share the same probes with the rest genes owing to the high homogeneous. The design includes random GC and other control probes.
 
Submission date Jun 22, 2017
Last update date Jun 01, 2020
Contact name Keqian Yang
E-mail(s) yangkq@im.ac.cn
Organization name IMCAS
Street address NO.1 Beichen West Road, Chaoyang District
City Beijing
ZIP/Postal code 100101
Country China
 
Samples (7) GSM2678501, GSM2678502, GSM2678503, GSM2678504, GSM2678505, GSM2678506 
Series (1)
GSE100343 Time-series transcription microarray data of Streptomyces coelicolor M145-OA

Data table header descriptions
ID
ORF ORF Name
SECONDARY_NAME Entrez GeneID number for the ORF to which the indicated probe is directed.
SPOT_ID
ACCESSION GenBank accession number of the Streptomyces coelicolor M145 chromosome.

Data table
ID ORF SECONDARY_NAME SPOT_ID ACCESSION
SCO0001 SCO0001 GI:21218583;GeneID:1095448 NC_003888
SCO0002 SCO0002 GI:21218584;GeneID:1095447 NC_003888
SCO0003 SCO0003 GI:21218585;GeneID:1095446 NC_003888
SCO0004 SCO0004 GI:21226092;GeneID:1095445 NC_003888
SCO0005 SCO0005 GI:32141096;GeneID:1095444 NC_003888
SCO0006 SCO0006 GI:21226090;GeneID:1095443 NC_003888
SCO0007 SCO0007 GI:21218589;GeneID:1095442 NC_003888
SCO0008 SCO0008 GI:21218590;GeneID:1095440 NC_003888
SCO0009 SCO0009 GI:21218591;GeneID:1095441 NC_003888
SCO0010 SCO0010 GI:21218592;GeneID:1095439 NC_003888
SCO0011 SCO0011 GI:21218593;GeneID:1095438 NC_003888
SCO0012 SCO0012 GI:21218594;GeneID:1095452 NC_003888
SCO0013 SCO0013 GI:21218595;GeneID:1095453 NC_003888
SCO0014 SCO0014 GI:21218596;GeneID:1095449 NC_003888
SCO0015 SCO0015 GI:21218597;GeneID:1095436 NC_003888
SCO0016 SCO0016 GI:21218598;GeneID:1095450 NC_003888
SCO0017 SCO0017 GI:21218599;GeneID:1095451 NC_003888
SCO0018 SCO0018 GI:21218600;GeneID:1095454 NC_003888
SCO0019 SCO0019 GI:21218601;GeneID:1095455 NC_003888
SCO0020 SCO0020 GI:32141097;GeneID:1095437 NC_003888

Total number of rows: 7730

Table truncated, full table size 407 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL23614_ScoelM145OA_YR_til_exp.ndf.gz 8.8 Mb (ftp)(http) NDF
GPL23614_ScoelM145OA_YR_til_exp.ngd.gz 882.5 Kb (ftp)(http) NGD

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