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Platform GPL23636 Query DataSets for GPL23636
Status Public on Jun 01, 2018
Title Agilent Custom M.tuberculosis Expression 8x15k Array (AMADID: 030010)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mycobacterium tuberculosis
Manufacturer Agilent Technologies
Manufacture protocol www.chem.agilent.com
 
Description Agilent Custom M.tuberculosis Expression 8x15k Array (AMADID: 030010) designed by Genotypic Technology Private Limited.
 
Submission date Jun 28, 2017
Last update date Jun 01, 2018
Contact name Genotypic technology
E-mail(s) sudha.rao@genotypic.co.in
Organization name Genotypic Technology
Street address 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
City Bangalore
State/province Karnataka
ZIP/Postal code 560094
Country India
 
Samples (12) GSM2687684, GSM2687685, GSM2687686, GSM2687687, GSM2687688, GSM2687689 
Series (1)
GSE100596 Gene expression profile of WT and phoP mutant Mtb under heat-shock condition

Data table header descriptions
ID
ORF ORF Name
ProbeName Oligonucleotide probe ID
SEQUENCE Oligonucleotide Probe sequence
Description Gene Description

Data table
ID ORF ProbeName SEQUENCE Description
MTB000001 MTB000001 GT_Specific_MTBRv_GE_0054138;GT_Specific_MTBRv_GE_0026035;GT_Specific_MTBRv_GE_0026034;GT_Specific_MTBRv_GE_0026036 GGTTAGAGCGCTTCGCTGATAACGAAGAGGTCGGAGGTTCGAGTCCTCCTAG;CTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCGGAGGTTC;CTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCGGAG;CTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCGGAGGTTCGAGTC Accession number: MTB000001; Gene name: ileT; Synonym: MTB000001; Gene length: 74; Gene type: tRNA; Coordinates: 10887..10960; Orientation: +; Description: tRNA-Ile; Next best Hit: MTB000053(alignment length 17bp with 100.00%identity);Accession number: MTB000001; Gene name: ileT; Synonym: MTB000001; Gene length: 74; Gene type: tRNA; Coordinates: 10887..10960; Orientation: +; Description: tRNA-Ile; Next best Hit: MTB000011(alignment length 20bp with 95.00%identity);Accession number: MTB000001; Gene name: ileT; Synonym: MTB000001; Gene length: 74; Gene type: tRNA; Coordinates: 10887..10960; Orientation: +; Description: tRNA-Ile; Next best Hit: MTB000011(alignment length 20bp with 95.00%identity);Accession number: MTB000001; Gene name: ileT; Synonym: MTB000001; Gene length: 74; Gene type: tRNA; Coordinates: 10887..10960; Orientation: +; Description: tRNA-Ile; Next best Hit: MTB000011(alignment length 20bp with 95.00%identity)
MTB000002 MTB000002 GT_Specific_MTBRv_GE_0019728;GT_Specific_MTBRv_GE_0032358;GT_Specific_MTBRv_GE_0019727;GT_Specific_MTBRv_GE_0019726 CCTTAGCTCAGTTGGTAGAGCACTGCCTTTGCAAGGCAGGGGTCAGG;CTTAGCTCAGTTGGTAGAGCACTGCCTTTGCAAGGCAGGGGTCAG;CCTTAGCTCAGTTGGTAGAGCACTGCCTTTGCAAGGCAGGGGTCAG;CCTTAGCTCAGTTGGTAGAGCACTGCCTTTGCAAGGCAGGGGTCA Accession number: MTB000002; Gene name: alaT; Synonym: MTB000002; Gene length: 73; Gene type: tRNA; Coordinates: 11112..11184; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000058(alignment length 20bp with 100.00%identity);Accession number: MTB000002; Gene name: alaT; Synonym: MTB000002; Gene length: 73; Gene type: tRNA; Coordinates: 11112..11184; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000058(alignment length 20bp with 100.00%identity);Accession number: MTB000002; Gene name: alaT; Synonym: MTB000002; Gene length: 73; Gene type: tRNA; Coordinates: 11112..11184; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000058(alignment length 20bp with 100.00%identity);Accession number: MTB000002; Gene name: alaT; Synonym: MTB000002; Gene length: 73; Gene type: tRNA; Coordinates: 11112..11184; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000058(alignment length 20bp with 100.00%identity)
MTB000003 MTB000003 GT_Specific_MTBRv_GE_0030960;GT_Specific_MTBRv_GE_0032549;GT_Specific_MTBRv_GE_0030959;GT_Specific_MTBRv_GE_0013087 CTGGCTTCAGGTGCCAGTGTCCTTCGGGACGTGGGGGTTCAAGTCC;CTTCAGGTGCCAGTGTCCTTCGGGACGTGGGGGTTCAAGTCCCCC;CTGGCTTCAGGTGCCAGTGTCCTTCGGGACGTGGGGGTTCAAGTC;CAGGTGCCAGTGTCCTTCGGGACGTGGGGGTTCAAGTCCCCCTTC Accession number: MTB000003; Gene name: leuT; Synonym: MTB000003; Gene length: 83; Gene type: tRNA; Coordinates: 25644..25726; Orientation: +; Description: tRNA-Leu; Next best Hit: MTB000046(alignment length 17bp with 100.00%identity);Accession number: MTB000003; Gene name: leuT; Synonym: MTB000003; Gene length: 83; Gene type: tRNA; Coordinates: 25644..25726; Orientation: +; Description: tRNA-Leu; Next best Hit: MTB000046(alignment length 20bp with 100.00%identity);Accession number: MTB000003; Gene name: leuT; Synonym: MTB000003; Gene length: 83; Gene type: tRNA; Coordinates: 25644..25726; Orientation: +; Description: tRNA-Leu; Next best Hit: MTB000046(alignment length 16bp with 100.00%identity);Accession number: MTB000003; Gene name: leuT; Synonym: MTB000003; Gene length: 83; Gene type: tRNA; Coordinates: 25644..25726; Orientation: +; Description: tRNA-Leu; Next best Hit: MTB000046(alignment length 20bp with 100.00%identity)
MTB000008 MTB000008 GT_Specific_MTBRv_GE_0021766;GT_Specific_MTBRv_GE_0047433;GT_Specific_MTBRv_GE_0005000;GT_Specific_MTBRv_GE_0005001 CGATGTAGTTCAATGGCAGAACATCAGCTTCCCAAGCTGAATACGCGGGTTCGATTC;GATGTAGTTCAATGGCAGAACATCAGCTTCCCAAGCTGAATACGCGGGTTCGAT;ATGTAGTTCAATGGCAGAACATCAGCTTCCCAAGCTGAATACGCGGGTTCGATT;ATGTAGTTCAATGGCAGAACATCAGCTTCCCAAGCTGAATACGCGGGTTCGATTC Accession number: MTB000008; Gene name: glyU; Synonym: MTB000008; Gene length: 71; Gene type: tRNA; Coordinates: 386204..386274; Orientation: -; Description: tRNA-Gly; Next best Hit: MTB000055(alignment length 15bp with 100.00%identity);Accession number: MTB000008; Gene name: glyU; Synonym: MTB000008; Gene length: 71; Gene type: tRNA; Coordinates: 386204..386274; Orientation: -; Description: tRNA-Gly; Next best Hit: MTB000055(alignment length 13bp with 100.00%identity);Accession number: MTB000008; Gene name: glyU; Synonym: MTB000008; Gene length: 71; Gene type: tRNA; Coordinates: 386204..386274; Orientation: -; Description: tRNA-Gly; Next best Hit: MTB000055(alignment length 14bp with 100.00%identity);Accession number: MTB000008; Gene name: glyU; Synonym: MTB000008; Gene length: 71; Gene type: tRNA; Coordinates: 386204..386274; Orientation: -; Description: tRNA-Gly; Next best Hit: MTB000055(alignment length 15bp with 100.00%identity)
MTB000009 MTB000009 GT_Specific_MTBRv_GE_0009290;GT_Specific_MTBRv_GE_0001421;GT_Specific_MTBRv_GE_0002249;GT_Specific_MTBRv_GE_0002248 CAATGGGAGCGGACTGTAAATCCGTCGCGAAAGCTACGCAGGTTCGAATC;AATGGGAGCGGACTGTAAATCCGTCGCGAAAGCTACGCAGGTTCGAATC;ACTGTAAATCCGTCGCGAAAGCTACGCAGGTTCGAATCCTGCACCTG;ACTGTAAATCCGTCGCGAAAGCTACGCAGGTTCGAATCCTGCACCT Accession number: MTB000009; Gene name: tyrT; Synonym: MTB000009; Gene length: 81; Gene type: tRNA; Coordinates: 658109..658189; Orientation: +; Description: tRNA-Tyr; Next best Hit: MTB000020(alignment length 14bp with 100.00%identity);Accession number: MTB000009; Gene name: tyrT; Synonym: MTB000009; Gene length: 81; Gene type: tRNA; Coordinates: 658109..658189; Orientation: +; Description: tRNA-Tyr; Next best Hit: MTB000020(alignment length 14bp with 100.00%identity);Accession number: MTB000009; Gene name: tyrT; Synonym: MTB000009; Gene length: 81; Gene type: tRNA; Coordinates: 658109..658189; Orientation: +; Description: tRNA-Tyr; Next best Hit: MTB000020(alignment length 18bp with 100.00%identity);Accession number: MTB000009; Gene name: tyrT; Synonym: MTB000009; Gene length: 81; Gene type: tRNA; Coordinates: 658109..658189; Orientation: +; Description: tRNA-Tyr; Next best Hit: MTB000020(alignment length 18bp with 100.00%identity)
MTB000010 MTB000010 GT_Specific_MTBRv_GE_0032346;GT_Specific_MTBRv_GE_0027323;GT_Specific_MTBRv_GE_0019723;GT_Specific_MTBRv_GE_0011915 CTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCAACGGTTC;CTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCAACGGTTCGATTCCGTTAG;CCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCAACGGTTCGATTC;CAGAGCGTTTCCATGGTAAGGAAAAGGTCAACGGTTCGATTCCGTTAGGGG Accession number: MTB000010; Gene name: thrT; Synonym: MTB000010; Gene length: 73; Gene type: tRNA; Coordinates: 731494..731566; Orientation: +; Description: tRNA-Thr; Next best Hit: MTB000072(alignment length 21bp with 95.24%identity);Accession number: MTB000010; Gene name: thrT; Synonym: MTB000010; Gene length: 73; Gene type: tRNA; Coordinates: 731494..731566; Orientation: +; Description: tRNA-Thr; Next best Hit: Rv3085(alignment length 13bp with 100.00%identity);Accession number: MTB000010; Gene name: thrT; Synonym: MTB000010; Gene length: 73; Gene type: tRNA; Coordinates: 731494..731566; Orientation: +; Description: tRNA-Thr; Next best Hit: MTB000072(alignment length 22bp with 95.45%identity);Accession number: MTB000010; Gene name: thrT; Synonym: MTB000010; Gene length: 73; Gene type: tRNA; Coordinates: 731494..731566; Orientation: +; Description: tRNA-Thr; Next best Hit: Rv0821c(alignment length 12bp with 100.00%identity)
MTB000011 MTB000011 GT_Specific_MTBRv_GE_0047430 GATGTAGCTCAGTCGGTTAGAGCGAACGACTCATAATCGTTAGGTCGCCGGTTCG Accession number: MTB000011; Gene name: metT; Synonym: MTB000011; Gene length: 74; Gene type: tRNA; Coordinates: 731603..731676; Orientation: +; Description: tRNA-Met; Next best Hit: MTB000052(alignment length 52bp with 82.69%identity)
MTB000012 MTB000012 GT_Specific_MTBRv_GE_0011906;GT_Specific_MTBRv_GE_0026947;GT_Specific_MTBRv_GE_0011905;GT_Specific_MTBRv_GE_0002466 CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTGTC;CTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTC;CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG;AGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTGTC Accession number: MTB000012; Gene name: trpT; Synonym: MTB000012; Gene length: 73; Gene type: tRNA; Coordinates: 733524..733596; Orientation: +; Description: tRNA-Trp; Next best Hit: Rv3612c(alignment length 13bp with 100.00%identity);Accession number: MTB000012; Gene name: trpT; Synonym: MTB000012; Gene length: 73; Gene type: tRNA; Coordinates: 733524..733596; Orientation: +; Description: tRNA-Trp; Next best Hit: Rv3612c(alignment length 13bp with 100.00%identity);Accession number: MTB000012; Gene name: trpT; Synonym: MTB000012; Gene length: 73; Gene type: tRNA; Coordinates: 733524..733596; Orientation: +; Description: tRNA-Trp; Next best Hit: Rv3612c(alignment length 13bp with 100.00%identity);Accession number: MTB000012; Gene name: trpT; Synonym: MTB000012; Gene length: 73; Gene type: tRNA; Coordinates: 733524..733596; Orientation: +; Description: tRNA-Trp; Next best Hit: Rv3612c(alignment length 13bp with 100.00%identity)
MTB000015 MTB000015 GT_Specific_MTBRv_GE_0032354;GT_Specific_MTBRv_GE_0027717;GT_Specific_MTBRv_GE_0032353;GT_Specific_MTBRv_GE_0032352 CTTAGCTCAGTGGTAGAGCACTCGCCTTGTAAGCGAGCGGTCGTCAGTTCAATCCTG;CTCCTTAGCTCAGTGGTAGAGCACTCGCCTTGTAAGCGAGCGGTCGTCAGTTCAATC;CTTAGCTCAGTGGTAGAGCACTCGCCTTGTAAGCGAGCGGTCGTCAGTTCAATC;CTTAGCTCAGTGGTAGAGCACTCGCCTTGTAAGCGAGCGGTCGTCAGTTCAAT Accession number: MTB000015; Gene name: thrV; Synonym: MTB000015; Gene length: 72; Gene type: tRNA; Coordinates: 850642..850713; Orientation: -; Description: tRNA-Thr; Next best Hit: MTB000080(alignment length 20bp with 95.00%identity);Accession number: MTB000015; Gene name: thrV; Synonym: MTB000015; Gene length: 72; Gene type: tRNA; Coordinates: 850642..850713; Orientation: -; Description: tRNA-Thr; Next best Hit: MTB000080(alignment length 20bp with 95.00%identity);Accession number: MTB000015; Gene name: thrV; Synonym: MTB000015; Gene length: 72; Gene type: tRNA; Coordinates: 850642..850713; Orientation: -; Description: tRNA-Thr; Next best Hit: MTB000080(alignment length 20bp with 95.00%identity);Accession number: MTB000015; Gene name: thrV; Synonym: MTB000015; Gene length: 72; Gene type: tRNA; Coordinates: 850642..850713; Orientation: -; Description: tRNA-Thr; Next best Hit: MTB000080(alignment length 20bp with 95.00%identity)
MTB000016 MTB000016 GT_Specific_MTBRv_GE_0019288 CCTATAGCTCAGTTGGTAGAGCTACGGACTTTTAATCCGCAGGTCCCAGGTTC Accession number: MTB000016; Gene name: lysT; Synonym: MTB000016; Gene length: 73; Gene type: tRNA; Coordinates: 923803..923875; Orientation: -; Description: tRNA-Lys; Next best Hit: MTB000002(alignment length 18bp with 100.00%identity)
MTB000017 MTB000017 GT_Xhyb_MTBRv_GE_0018330 CCCTTCGTCTAGACGGCCTAGGACGCCGCCCTTTCAAGGCGGTAA "Accession number: MTB000017; Gene name: gluT; Synonym: MTB000017; Gene length: 74; Gene type: tRNA; Coordinates: 923999..924072; Orientation: +; Description: tRNA-Glu; Next best Hit: MTB000064(alignment length 40bp with 92.50%identity), Potential cross h"
MTB000018 MTB000018 GT_Specific_MTBRv_GE_0013638;GT_Specific_MTBRv_GE_0013640;GT_Specific_MTBRv_GE_0003003;GT_Specific_MTBRv_GE_0013639 CAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC;CAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGTC;AGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGTC;CAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG Accession number: MTB000018; Gene name: aspT; Synonym: MTB000018; Gene length: 74; Gene type: tRNA; Coordinates: 924110..924183; Orientation: +; Description: tRNA-Asp; Next best Hit: Rv3308(alignment length 14bp with 100.00%identity);Accession number: MTB000018; Gene name: aspT; Synonym: MTB000018; Gene length: 74; Gene type: tRNA; Coordinates: 924110..924183; Orientation: +; Description: tRNA-Asp; Next best Hit: MTB000057(alignment length 16bp with 100.00%identity);Accession number: MTB000018; Gene name: aspT; Synonym: MTB000018; Gene length: 74; Gene type: tRNA; Coordinates: 924110..924183; Orientation: +; Description: tRNA-Asp; Next best Hit: MTB000057(alignment length 16bp with 100.00%identity);Accession number: MTB000018; Gene name: aspT; Synonym: MTB000018; Gene length: 74; Gene type: tRNA; Coordinates: 924110..924183; Orientation: +; Description: tRNA-Asp; Next best Hit: MTB000052(alignment length 15bp with 100.00%identity)
MTB000019 MTB000019 GT_Specific_MTBRv_GE_0013019;GT_Specific_MTBRv_GE_0002779;GT_Specific_MTBRv_GE_0013020;GT_Specific_MTBRv_GE_0002780 CAGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGT;AGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTC;CAGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTC;AGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTCG Accession number: MTB000019; Gene name: pheU; Synonym: MTB000019; Gene length: 74; Gene type: tRNA; Coordinates: 924213..924286; Orientation: +; Description: tRNA-Phe; Next best Hit: MTB000011(alignment length 14bp with 100.00%identity);Accession number: MTB000019; Gene name: pheU; Synonym: MTB000019; Gene length: 74; Gene type: tRNA; Coordinates: 924213..924286; Orientation: +; Description: tRNA-Phe; Next best Hit: MTB000011(alignment length 14bp with 100.00%identity);Accession number: MTB000019; Gene name: pheU; Synonym: MTB000019; Gene length: 74; Gene type: tRNA; Coordinates: 924213..924286; Orientation: +; Description: tRNA-Phe; Next best Hit: MTB000011(alignment length 14bp with 100.00%identity);Accession number: MTB000019; Gene name: pheU; Synonym: MTB000019; Gene length: 74; Gene type: tRNA; Coordinates: 924213..924286; Orientation: +; Description: tRNA-Phe; Next best Hit: MTB000011(alignment length 14bp with 100.00%identity)
MTB000020 MTB000020 GT_Specific_MTBRv_GE_0044028;GT_Specific_MTBRv_GE_0003174;GT_Specific_MTBRv_GE_0028281;GT_Specific_MTBRv_GE_0003175 GATAGAGCACGGCTCTCCTAAAGCCGGTGTCGCAGGTTCGAATCC;ATAGAGCACGGCTCTCCTAAAGCCGGTGTCGCAGGTTCGAATCCT;CTCGTAGCTCAGGGGATAGAGCACGGCTCTCCTAAAGCCGGTGTC;ATAGAGCACGGCTCTCCTAAAGCCGGTGTCGCAGGTTCGAATCCTG Accession number: MTB000020; Gene name: argT; Synonym: MTB000020; Gene length: 73; Gene type: tRNA; Coordinates: 1025321..1025393; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000069(alignment length 17bp with 100.00%identity);Accession number: MTB000020; Gene name: argT; Synonym: MTB000020; Gene length: 73; Gene type: tRNA; Coordinates: 1025321..1025393; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000069(alignment length 18bp with 100.00%identity);Accession number: MTB000020; Gene name: argT; Synonym: MTB000020; Gene length: 73; Gene type: tRNA; Coordinates: 1025321..1025393; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000032(alignment length 20bp with 100.00%identity);Accession number: MTB000020; Gene name: argT; Synonym: MTB000020; Gene length: 73; Gene type: tRNA; Coordinates: 1025321..1025393; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000069(alignment length 19bp with 100.00%identity)
MTB000022 MTB000022 GT_Specific_MTBRv_GE_0020856;GT_Specific_MTBRv_GE_0020854;GT_Specific_MTBRv_GE_0020855;GT_Specific_MTBRv_GE_0002204 CGACTCGTTCGCATCGAGTAGGTCAGGGGTTCGAATCCCCTTAGCTC;CGACTCGTTCGCATCGAGTAGGTCAGGGGTTCGAATCCCCTTAGC;CGACTCGTTCGCATCGAGTAGGTCAGGGGTTCGAATCCCCTTAGCT;ACTCGTTCGCATCGAGTAGGTCAGGGGTTCGAATCCCCTTAGCTCC Accession number: MTB000022; Gene name: alaV; Synonym: MTB000022; Gene length: 73; Gene type: tRNA; Coordinates: 1113511..1113583; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000066(alignment length 27bp with 96.30%identity);Accession number: MTB000022; Gene name: alaV; Synonym: MTB000022; Gene length: 73; Gene type: tRNA; Coordinates: 1113511..1113583; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000066(alignment length 25bp with 96.00%identity);Accession number: MTB000022; Gene name: alaV; Synonym: MTB000022; Gene length: 73; Gene type: tRNA; Coordinates: 1113511..1113583; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000066(alignment length 26bp with 96.15%identity);Accession number: MTB000022; Gene name: alaV; Synonym: MTB000022; Gene length: 73; Gene type: tRNA; Coordinates: 1113511..1113583; Orientation: +; Description: tRNA-Ala; Next best Hit: MTB000066(alignment length 28bp with 96.43%identity)
MTB000023 MTB000023 GT_Specific_MTBRv_GE_0058295;GT_Specific_MTBRv_GE_0053989;GT_Specific_MTBRv_GE_0023910;GT_Specific_MTBRv_GE_0053988 GTCGTGGTGTAATCGGCAGCACCTCTGATTTTGGTTCAGATAGTTCAGGTTCGAG;GGTGTAATCGGCAGCACCTCTGATTTTGGTTCAGATAGTTCAGGTTCGAGTCCTG;CGTGGTGTAATCGGCAGCACCTCTGATTTTGGTTCAGATAGTTCAGGTTCGAGTC;GGTGTAATCGGCAGCACCTCTGATTTTGGTTCAGATAGTTCAGGTTCGAGTCCT Accession number: MTB000023; Gene name: glnT; Synonym: MTB000023; Gene length: 72; Gene type: tRNA; Coordinates: 1138076..1138147; Orientation: -; Description: tRNA-Gln; Next best Hit: Rv1330c(alignment length 13bp with 100.00%identity);Accession number: MTB000023; Gene name: glnT; Synonym: MTB000023; Gene length: 72; Gene type: tRNA; Coordinates: 1138076..1138147; Orientation: -; Description: tRNA-Gln; Next best Hit: MTB000065(alignment length 55bp with 81.82%identity);Accession number: MTB000023; Gene name: glnT; Synonym: MTB000023; Gene length: 72; Gene type: tRNA; Coordinates: 1138076..1138147; Orientation: -; Description: tRNA-Gln; Next best Hit: MTB000065(alignment length 53bp with 81.13%identity);Accession number: MTB000023; Gene name: glnT; Synonym: MTB000023; Gene length: 72; Gene type: tRNA; Coordinates: 1138076..1138147; Orientation: -; Description: tRNA-Gln; Next best Hit: MTB000065(alignment length 54bp with 81.48%identity)
MTB000024 MTB000024 GT_Specific_MTBRv_GE_0003184;GT_Specific_MTBRv_GE_0009498;GT_Specific_MTBRv_GE_0001535;GT_Specific_MTBRv_GE_0001536 ATAGCCCAATTGGCAGAGGCAGCGGACTTAAAATCCGTCAAGTGTCGGTTC;CAATTGGCAGAGGCAGCGGACTTAAAATCCGTCAAGTGTCGGTTCGAG;AATTGGCAGAGGCAGCGGACTTAAAATCCGTCAAGTGTCGGTTCGAGT;AATTGGCAGAGGCAGCGGACTTAAAATCCGTCAAGTGTCGGTTCGAGTC Accession number: MTB000024; Gene name: leuX; Synonym: MTB000024; Gene length: 74; Gene type: tRNA; Coordinates: 1177396..1177469; Orientation: +; Description: tRNA-Leu; Next best Hit: Rv2001(alignment length 16bp with 100.00%identity);Accession number: MTB000024; Gene name: leuX; Synonym: MTB000024; Gene length: 74; Gene type: tRNA; Coordinates: 1177396..1177469; Orientation: +; Description: tRNA-Leu; Next best Hit: Rv0609(alignment length 14bp with 100.00%identity);Accession number: MTB000024; Gene name: leuX; Synonym: MTB000024; Gene length: 74; Gene type: tRNA; Coordinates: 1177396..1177469; Orientation: +; Description: tRNA-Leu; Next best Hit: Rv0609(alignment length 14bp with 100.00%identity);Accession number: MTB000024; Gene name: leuX; Synonym: MTB000024; Gene length: 74; Gene type: tRNA; Coordinates: 1177396..1177469; Orientation: +; Description: tRNA-Leu; Next best Hit: Rv0609(alignment length 14bp with 100.00%identity)
MTB000032 MTB000032 GT_Specific_MTBRv_GE_0044034;GT_Specific_MTBRv_GE_0044032;GT_Specific_MTBRv_GE_0003176;GT_Specific_MTBRv_GE_0044033 GATAGAGCGTCTGCCTCCGGAGCAGAAGGCCGCAGGTTCGAATCCTG;GATAGAGCGTCTGCCTCCGGAGCAGAAGGCCGCAGGTTCGAATCC;ATAGAGCGTCTGCCTCCGGAGCAGAAGGCCGCAGGTTCGAATCCTG;GATAGAGCGTCTGCCTCCGGAGCAGAAGGCCGCAGGTTCGAATCCT Accession number: MTB000032; Gene name: argV; Synonym: MTB000032; Gene length: 73; Gene type: tRNA; Coordinates: 1446193..1446265; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000054(alignment length 29bp with 93.10%identity);Accession number: MTB000032; Gene name: argV; Synonym: MTB000032; Gene length: 73; Gene type: tRNA; Coordinates: 1446193..1446265; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000054(alignment length 27bp with 92.59%identity);Accession number: MTB000032; Gene name: argV; Synonym: MTB000032; Gene length: 73; Gene type: tRNA; Coordinates: 1446193..1446265; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000054(alignment length 29bp with 93.10%identity);Accession number: MTB000032; Gene name: argV; Synonym: MTB000032; Gene length: 73; Gene type: tRNA; Coordinates: 1446193..1446265; Orientation: -; Description: tRNA-Arg; Next best Hit: MTB000054(alignment length 28bp with 92.86%identity)
MTB000033 MTB000033 GT_Specific_MTBRv_GE_0033597;GT_Specific_MTBRv_GE_0005140;GT_Specific_MTBRv_GE_0016166;GT_Specific_MTBRv_GE_0016165 CTTGTCTCATGTTGCCAGCACGTAATGGTGGGGACTCGTGAGAGACTG;ATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGTTTGACATGCACAG;CATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGTTTGACATGCACAG;CATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGTTTGACATGCAC Accession number: MTB000033; Gene name: rrs; Synonym: MTB000033; Gene length: 1537; Gene type: rRNA; Coordinates: 1471846..1473382; Orientation: +; Description: ribosomal RNA 16S; Next best Hit: Rv0107c(alignment length 13bp with 100.00%identity);Accession number: MTB000033; Gene name: rrs; Synonym: MTB000033; Gene length: 1537; Gene type: rRNA; Coordinates: 1471846..1473382; Orientation: +; Description: ribosomal RNA 16S; Next best Hit: Rv2515c(alignment length 14bp with 100.00%identity);Accession number: MTB000033; Gene name: rrs; Synonym: MTB000033; Gene length: 1537; Gene type: rRNA; Coordinates: 1471846..1473382; Orientation: +; Description: ribosomal RNA 16S; Next best Hit: Rv2515c(alignment length 14bp with 100.00%identity);Accession number: MTB000033; Gene name: rrs; Synonym: MTB000033; Gene length: 1537; Gene type: rRNA; Coordinates: 1471846..1473382; Orientation: +; Description: ribosomal RNA 16S; Next best Hit: Rv2515c(alignment length 14bp with 100.00%identity)
MTB000034 MTB000034 GT_Specific_MTBRv_GE_0011625;GT_Specific_MTBRv_GE_0002415;GT_Specific_MTBRv_GE_0002126;GT_Specific_MTBRv_GE_0011134 CAGAAACTTGAGGAAACCTGTCCCTAGTACGAGAGGACCGGGACGGAC;AGAATTTAAGCCCCAGTAAACGGCGGTGGTAACTATAACCATCCTAAGGTAGCGAAATTC;ACTACAACTTGGTATTGATGTTCGGTACGGTTTGTGTAGGATAGGTGGGAGACTGTGAAA;CACTACAACTTGGTATTGATGTTCGGTACGGTTTGTGTAGGATAGGTGGGAGACTGTGAA Accession number: MTB000034; Gene name: rrl; Synonym: MTB000034; Gene length: 3138; Gene type: rRNA; Coordinates: 1473658..1476795; Orientation: +; Description: ribosomal RNA 23S; Next best Hit: Rv2478c(alignment length 14bp with 100.00%identity);Accession number: MTB000034; Gene name: rrl; Synonym: MTB000034; Gene length: 3138; Gene type: rRNA; Coordinates: 1473658..1476795; Orientation: +; Description: ribosomal RNA 23S; Next best Hit: Rv0755c(alignment length 13bp with 100.00%identity);Accession number: MTB000034; Gene name: rrl; Synonym: MTB000034; Gene length: 3138; Gene type: rRNA; Coordinates: 1473658..1476795; Orientation: +; Description: ribosomal RNA 23S; Next best Hit: Rv2078(alignment length 12bp with 100.00%identity);Accession number: MTB000034; Gene name: rrl; Synonym: MTB000034; Gene length: 3138; Gene type: rRNA; Coordinates: 1473658..1476795; Orientation: +; Description: ribosomal RNA 23S; Next best Hit: Rv2078(alignment length 12bp with 100.00%identity)

Total number of rows: 4016

Table truncated, full table size 1479 Kbytes.




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