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Platform GPL23647 Query DataSets for GPL23647
Status Public on Jul 04, 2017
Title Agilent-028943 S. cerevisiae Custom CGH array (Probe name version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Agilent-028943:Petes custom array design for S. cerevisiae CGH with lambda dosage controls and tiled rDNA, X/Yprime, CUP1, and SFA1
 
Submission date Jul 03, 2017
Last update date Jul 04, 2017
Contact name Daoqiong Zheng
E-mail(s) zhengdaoqiong@163.com
Phone 86 571 88206636
Organization name College of Life Sciences, Zhejiang University
Department Institute of Microbiology
Street address 866 Yuhangtang Road
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
 
Samples (12) GSM2692354, GSM2692355, GSM2692356, GSM2692357, GSM2692358, GSM2692359 
Series (1)
GSE100741 Effects of temperatures on meiotic recombination in S. cerevisiae [CGH]

Data table header descriptions
ID Agilent probe name
NAME Based on yeast genome build is sacCer1
SEQUENCE
ORF ORF Name
ControlType
GeneName
TopHit
Description Description
SPOT_ID Spot identifier

Data table
ID NAME SEQUENCE ORF ControlType GeneName TopHit Description SPOT_ID
DarkCorner DarkCorner pos DarkCorner DarkCorner
A_75_P01899247 chr13:778398-778457 AAAAAGAAAATTGAAGAGCAGAGGGAAATATTGCAAAAGACTCATCACAAGAATCAACA YMR255W FALSE sgd|YMR255W:428|sgd|YMR252C:-2709|sgd|YMR251W:5514|sgd|YMR250W:7628|sgd|YMR247W-A:9146|sgd|YMR259C:10455 INSIDE A_75_P01899247
A_75_P01190504 chr4:568296-568354 CTTATCCTTCGACTCGATTTTCTTTACTTCTTTCTGTAACTGAGCATCCAAAGCCATT YDR058C FALSE sgd|YDR058C:374|sgd|YDR059C:1441|sgd|YDR056C:-2689|sgd|YDR055W:4803|sgd|YDR061W:-5833|sgd|YDR052C:-7704 INSIDE A_75_P01190504
A_75_P01628666 chr10:530070-530129 AAAAAACTAAAGGATATCTCTTCCAAAGATTCCAATCTCGTGCAGATTATGCTAAACAG YJR051W FALSE sgd|YJR051W:545|sgd|YJR052W:-1656|sgd|YJR053W:-3621|sgd|YJR047C:-5024|sgd|YJR046W:8358 INSIDE A_75_P01628666
A_75_P01554044 chr9:215080-215139 AAATCCTGAGATAAATATATCGGATTCATGATCCACTGAAGCATCTGATTCCTGCGACT YIL077C FALSE sgd|YIL077C:841|sgd|YIL078W:2614|sgd|YIL075C:5588|sgd|YIL074C:7378|sgd|YIL073C:10842 INSIDE A_75_P01554044
A_75_P02071916 chr15:815448-815507 AAAATCGGTTCAAAGTGTAAACTCAGCAATTGTTATATCGAAGGCCATTATGTTGTGGA YOR260W FALSE sgd|YOR260W:1496|sgd|YOR264W:-3385|sgd|YOR257W:4472|sgd|YOR266W:-5542|sgd|YOR255W:8208|sgd|YOR267C:9387 INSIDE A_75_P02071916
A_75_P02071549 chr15:811752-811811 GTGTCCATAATTAGAGACTCGTTTCCTAAATCAGAGTGCCATTTATTGATTCTACCACG YOR258W FALSE sgd|YOR258W:113|sgd|YOR259C:1925|sgd|YOR255W:4512|sgd|YOR264W:-7081|sgd|YOR251C:-8317|sgd|YOR250C:-9474 INSIDE A_75_P02071549
SM_11 SM_11 pos SM_11 SM_11
A_75_P01217190 chr4:837989-838048 CTTGTTATTATGCGATGAATTGTTAAGGGCAGGTAGATCCACTTTGAAAGAAACACCAC YDR188W FALSE sgd|YDR188W:1606|sgd|YDR190C:3969|sgd|YDR185C:-5553|sgd|YDR192C:6835|sgd|YDR183W:8442|sgd|YDR194C:9920 INSIDE A_75_P01217190
A_75_P02158381 chr16:599342-599401 AGGGAAATTATGAATGTTTTGAAGGATCAGGCATCAGACTCAATGTCATTCAATGAGCT YPR019W FALSE sgd|YPR019W:2627|sgd|YPR021C:3981|sgd|YPR017C:-5459|sgd|YPR022C:7936|sgd|YPR023C:10655 INSIDE A_75_P02158381
A_75_P01725794 chr12:101792-101851 ATAACCCTAACTCAGAGATGGAAGACAAGGTTAAAGAACTGACTGATTTAAACAGCGAC YLL021W FALSE sgd|YLL021W:876|sgd|YLL023C:-2986|sgd|YLL024C:-4337|sgd|YLL019C:6077|sgd|YLL018C-A:7150|sgd|YLL018C:9753 INSIDE A_75_P01725794
A_75_P01805786 chr12:911821-911880 AGGGTATATTCGTTCGATAGCTCCTTTAACTGAGATTCAATGACGTTAGGGAAATGTGT YLR396C FALSE sgd|YLR396C:459|sgd|YLR395C:-1886|sgd|YLR397C:3041|sgd|YLR393W:4773|sgd|YLR398C:7168|sgd|YLR390W:8786 INSIDE A_75_P01805786
A_75_P01045891 chr2:234839-234898 AAAATACTGGAAGACAAATTGCAAGTATCCGATTTTACAAAAATATACACTGCTGTCAA YBL004W FALSE sgd|YBL004W:7271|sgd|YBR004C:10760 INSIDE A_75_P01045891
A_75_P01580756 chr10:46429-46488 CTTTCCACGTCTCGTGTATCACAGTTTAAGAATATCTTAACGTAGATGGACCATACTTC YJL207C FALSE sgd|YJL207C:975|sgd|YJL206C:3477|sgd|YJL208C:-5275|sgd|YJL204C:6693|sgd|YJL201W:-7920|sgd|YJL210W:9540|sgd|YJL200C:12355 INSIDE A_75_P01580756
A_75_P01576034 chr9:438196-438255 CGAGGTTTTTTTATTCAAAGTAATAACTTCTTCCTTTTCGCTTTTATGTAGCAGAAAAA YIR042C FALSE sgd|YIR042C:-2245|sgd|YIR041W:4301|sgd|YIR039C:-6118 PROMOTER A_75_P01576034
A_75_P01287529 chr5:17390-17446 AAGCCGATTTTGATAGACTTTGGACCTGGAGAAAATCTGTTCCAACAGCTTGTAAT YEL071W FALSE sgd|YEL071W:1064|sgd|YEL070W:-2170|sgd|YEL072W:3699|sgd|YEL069C:5813|sgd|YEL066W:-9248 INSIDE A_75_P01287529
A_75_P01241416 chr4:1082682-1082741 CTTGAATCACGTCTTTTATCTAATTCTCTTTGTTGTCTATTCATCTCTGACGTAACCGC YDR310C FALSE sgd|YDR310C:1596|sgd|YDR308C:-4271|sgd|YDR307W:6856|sgd|YDR305C:-9232 INSIDE A_75_P01241416
A_75_P01847948 chr13:260467-260526 AACACCAAAGTAACAGCATTACGGAATTTACGAAGAGCTTTTTAAAAGATCATGGGCTT YML005W FALSE sgd|YML005W:276|sgd|YML006C:-2080|sgd|YML002W:-4044|sgd|YML007W:6649|sgd|YML009C:-8980|sgd|YMR001C:10640|sgd|YML010W:12820 INSIDE A_75_P01847948
A_75_P02102854 chr16:38174-38233 TCACCATCAAAAAAGAGAACCATTTTATCAAGCAAGAATATAAACCAAAAACCACGAGC YPL267W FALSE sgd|YPL267W:35|sgd|YPL265W:-2839|sgd|YPL269W:5191|sgd|YPL270W:7722|sgd|YPL262W:-9132 INSIDE A_75_P02102854
A_75_P02030673 chr15:399102-399161 AAGATTTCGGACAGTTGCTTCAAGTTTATACACGTTAATTTTGTGAAAGACCATGTCTT YOR035C FALSE sgd|YOR035C:972|sgd|YOR034C:-2046|sgd|YOR033C:-4608|sgd|YOR038C:6256|sgd|YOR040W:-7931|sgd|YOR042W:-9292 INSIDE A_75_P02030673

Total number of rows: 15265

Table truncated, full table size 3434 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL23647_028943_D_20100615.gal.gz 9.8 Mb (ftp)(http) GAL

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