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Platform GPL24085 Query DataSets for GPL24085
Status Public on Oct 06, 2017
Title Agilent-049286 Ath_8x60K_exp_validated [PROBE NAME]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Arabidopsis thaliana
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description The provided SEQUENCE is only a subset of at least 30 nucleotides of the sequence in the design (this is a kind of copy protection).
 
Submission date Oct 05, 2017
Last update date Apr 25, 2023
Contact name Weber Simone
E-mail(s) simoneweber.fr@gmail.com, Selina.Sitte@uk-erlangen.de
Phone 0049-9131-8535000
Organization name Friedrich-Alexander University Erlangen-Nuremberg
Department Medicine
Lab Prof. R. Atreya
Street address Ulmenweg 18
City Erlangen
State/province Bavaria
ZIP/Postal code 91052
Country Germany
 
Samples (24) GSM2805071, GSM2805072, GSM2805073, GSM2805074, GSM2805075, GSM2805076 
Series (1)
GSE104652 Ectopic overexpression of the SnRK1 interacting protein STOREKEEPER RELATED 1/GeBP affects growth and development of Arabidopsis thaliana and leads to a constitutive immune response

Data table header descriptions
ID Agilent feature number
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GENE_SYMBOL Gene Symbol
ACCESSION_STRING Accession String
ORF Locus tag
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description
SEQUENCE Sequence

Data table
ID SPOT_ID CONTROL_TYPE GENE_SYMBOL ACCESSION_STRING ORF CHROMOSOMAL_LOCATION DESCRIPTION SEQUENCE
ZA6000640 FALSE PIP1C AT1G01620.1 AT1G01620 chr1:225986-227176 plasma membrane intrinsic protein 1C protein_coding GGATATTCTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCA
ZA6001054 FALSE LAP6 AT1G02050.1 AT1G02050 chr1:359164-360441 Chalcone and stilbene synthase family protein protein_coding GTCGATGGAGTTCAATGACATGTTCTGGGCTGTTCATCCAGGAGGA
ZA6001123 FALSE AT1G02110.1 AT1G02110 chr1:392939-395434 Protein of unknown function (DUF630 and DUF632) protein_coding TAATGAGGCACGTGAAGGCTGTGGAGGTGACACGAGCTATGACTCTCAA
ZA6001508 FALSE SAM1 AT1G02500.1 AT1G02500 chr1:519037-520218 S-adenosylmethionine synthetase 1 protein_coding GAGCGTTGTGGCTAACGGGATGGCTCGTAGGGCTCTTGTTCAGGTCTC
ZA6002472 FALSE AT1G03440.1 AT1G03440 chr1:852681-853874 Leucine-rich repeat (LRR) family protein protein_coding AAACCCCGTGTCCGCTAAAGGCCGGCCCACAAAAGACTAGGCCCACTACAC
ZA6002566 FALSE NAF1 AT1G03530.1 AT1G03530 chr1:880638-883338 nuclear assembly factor 1 protein_coding CCACAATCTCAAGGGTTTAGCAGCGGGCAGTCTTCTGAACGGGGAAGGGGCTTCC
ZA6004181 FALSE MAPKKK18 AT1G05100.1 AT1G05100 chr1:1469679-1470698 mitogen-activated protein kinase kinase kinase 18 protein_coding TGTGGTGGAGTCCACATGGGACTTGGACGGTGAGGATTGGATCACGGTTCGACG
ZA6005130 FALSE AT1G06000.1 AT1G06000 chr1:1820495-1821802 UDP-Glycosyltransferase superfamily protein protein_coding CTAGGATTTTGGCTGAGTCGGCGAGAGAGGACTTGCCGGAGAGAGTTACGT
ZA6006110 FALSE CHX14 AT1G06970.1 AT1G06970 chr1:2138109-2140818 cation/hydrogen exchanger 14 protein_coding GTTATACGGACTTACAGACTGGAGCGAGTGCCCTGAGCTAGGTGTGATCGGA
ZA6006398 FALSE UGT71C5 AT1G07240.1 AT1G07240 chr1:2223889-2225331 UDP-glucosyl transferase 71C5 protein_coding GATAAGGCTTGACTACGTGGCGGATGGTGATAGGGTTACTTTGGAGATCG
ZA6006507 FALSE SR45a AT1G07350.1 AT1G07350 chr1:2257732-2260101 RNA-binding (RRM/RBD/RNP motifs) family protein protein_coding CTCCAACAAATTTCTGTTGTTGTATAATTGTTCCACTTACTTTTCCA
ZA6007006 FALSE ECA1 AT1G07810.1 AT1G07810 chr1:2416681-2420572 ER-type Ca2+-ATPase 1 protein_coding GGGATAGTGCCACTGAGCTTGAACGAGTGGCTGCTGGTACTGGCTGTTTCGCT
ZA6007007 FALSE ECA1 AT1G07810.1 AT1G07810 chr1:2416681-2420572 ER-type Ca2+-ATPase 1 protein_coding TCATTCGGGCTCCACTTTGTGATACTGTACGTGCCATTCCTGGCTCAGGT
ZA6007131 FALSE AT1G07940.1 AT1G07940 chr1:2463350-2464792 GTP binding Elongation factor Tu family protein protein_coding CAAGAAGGACCCAACTGGAGCCAAGGTTACCAAGGCTGCAGTCAAGAAGGGTGC
ZA6007304 FALSE NRT2:1 AT1G08090.1 AT1G08090 chr1:2524139-2525920 nitrate transporter 2:1 protein_coding CCGCTCTGCTGCTACGCCGCCTGAGAACACACCCAACAATGTTTGATC
ZA6007314 FALSE NRT2.2 AT1G08100.1 AT1G08100 chr1:2527268-2529078 nitrate transporter 2.2 protein_coding GGTCAGGACTCACACAGCTCGTCTTTTTCTCGACTTCGCGCTTCACAACTGAA
ZA6007476 FALSE ADT6 AT1G08250.1 AT1G08250 chr1:2588994-2590235 arogenate dehydratase 6 protein_coding GTTTACATCGTTCTTGCGGGTGCTTGGGAGTTATCCCATGGATATG
ZA6009575 FALSE GRP23 AT1G10270.1 AT1G10270 chr1:3363535-3366276 glutamine-rich protein 23 protein_coding TTCCTCAACAACAGGAGCCAGGGCCTTCCCATGAGTGCCAAGAGACACAAGAAAA
ZA6012785 FALSE GATL3 AT1G13250.1 AT1G13250 chr1:4528965-4530002 galacturonosyltransferase-like 3 protein_coding CTAAGGCTTGACTCGAGACGACCGTGTCCGTTGGATTCGTTATGGGCTCCTTATG
ZA6014004 FALSE AT1G14430.1 AT1G14430 chr1:4934359-4936053 glyoxal oxidase-related protein protein_coding GGGCCTACTAACTCCTACGTGGCACCACCTGGGTATTATATGATGTTCGTGGTT

Total number of rows: 59073

Table truncated, full table size 11724 Kbytes.




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