NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL24307 Query DataSets for GPL24307
Status Public on Feb 01, 2018
Title Agilent-084792 SurePrint G3 Custom GE 8×60K Gallus gallus (AMADID G4102A084792)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Gallus gallus
Manufacturer Agilent
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
 
Submission date Nov 27, 2017
Last update date Feb 01, 2018
Contact name Yuwares Malila
Organization name National Center for Genetic Engineering and Biotechnology
Street address 113 Thailand Science Park Phahonyothin Road Khlong Nueng, Khlong Luang
City Pathumthani
ZIP/Postal code 12120
Country Thailand
 
Samples (40) GSM2865395, GSM2865396, GSM2865397, GSM2865398, GSM2865399, GSM2865400 
Series (1)
GSE107362 Phenotypic and genotypic relationships between meat quality characteristics and expression of target genes associated with broiler meat quality defects

Data table header descriptions
ID
COL
ROW
NAME
SPOT_ID
CONTROL_TYPE
GENE SYMBOL
GB_ACC GenBank Accession number
CHROMOSOMAL_LOCATION
DESCRIPTION
SEQUENCE

Data table
ID COL ROW NAME SPOT_ID CONTROL_TYPE GENE SYMBOL GB_ACC CHROMOSOMAL_LOCATION DESCRIPTION SEQUENCE
1 192 328 GE_BrightCorner CONTROL pos
2 192 326 DarkCorner CONTROL pos
3 192 324 DarkCorner CONTROL pos
4 192 322 gi|971448791|ref|XM_015273740.1| gi|971448791|ref|XM_015273740.1| FALSE LOC100857141 XM_015273740.1 unmapped "PREDICTED: Gallus gallus T-cell-interacting, activating receptor on myeloid cells protein 1-like (LOC100857141), partial mRNA" GGAACCCAAGATCCCTCAAATCAGATAATGAGATGGCTTACTCTAACCTTGTGTGATGCC
5 192 320 gi|971410327|ref|XM_015277112.1| gi|971410327|ref|XM_015277112.1| FALSE ESPNL XM_015277112.1 unmapped "PREDICTED: Gallus gallus espin-like (ESPNL), transcript variant X2, mRNA" TGCCCGCGGTGCTTCCCAAGGGGCCTCAATAAAAGCCTTCCAGTTCTGTCTTGAAATAAA
6 192 318 gi|971386385|ref|XM_015283537.1| gi|971386385|ref|XM_015283537.1| FALSE LOC107052863 XM_015283537.1 unmapped "PREDICTED: Gallus gallus 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like (LOC107052863), mRNA" GGAAAACATGCCAGAGCTCCCAAGGTAAGCATTTCTGCTGTATGATTGATTACCTGTTGC
7 192 316 gi|83721946|ref|NM_001037826.1| gi|83721946|ref|NM_001037826.1| FALSE NR3C1 NM_001037826.1 unmapped "Gallus gallus nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) (NR3C1), mRNA" TTCTGCAGTACTCCTGGATGTTCCTAATGGCTTTTGCTTTAGGATGGAGGTCATACAAAC
8 192 314 gi|971448397|ref|XR_001462133.1| gi|971448397|ref|XR_001462133.1| FALSE LOC107049787 XR_001462133.1 unmapped "PREDICTED: Gallus gallus uncharacterized LOC107049787 (LOC107049787), transcript variant X4, ncRNA" ACTGAATGTTTTCCTTGTGTGTGAGCAATCCTTGCTCTTTCCAGATGGCACTATGAGCGT
9 192 312 gi|955471889|ref|NM_001317341.1| gi|955471889|ref|NM_001317341.1| FALSE OvoDA3 NM_001317341.1 unmapped "Gallus gallus ovodefensin subfamily A, member 3 (OvoDA3), mRNA" GCAGCTTCTCCATGCTCTGACCCACGTGTCATCCCCTCCTCTCAATAAAGAGAAAGAGAA
10 192 310 gi|971435481|ref|XM_015299639.1| gi|971435481|ref|XM_015299639.1| FALSE NAGLU XM_015299639.1 unmapped "PREDICTED: Gallus gallus N-acetylglucosaminidase, alpha (NAGLU), mRNA" TTCTCTGCCTTTTCTTCCCAGTGCTGGCAATCAGCACGAGGGGCTATTAAAGCCCTGGGC
11 192 308 gi|971439219|ref|XM_015280309.1| gi|971439219|ref|XM_015280309.1| FALSE AGTPBP1 XM_015280309.1 unmapped "PREDICTED: Gallus gallus ATP/GTP binding protein 1 (AGTPBP1), transcript variant X11, mRNA" TTCACACTCCAGTATCCCATTAGTAGTTTGGTGAGAAGTTTGACAGCTTAGCTGAAACTG
12 192 306 gi|971381133|ref|XM_015281865.1| gi|971381133|ref|XM_015281865.1| FALSE TMEM196 XM_015281865.1 unmapped "PREDICTED: Gallus gallus transmembrane protein 196 (TMEM196), transcript variant X3, mRNA" GACAGAATGCTCTAAGAATGCCATAAATCAAAACCTCAACAATGCCTTGTTGTAAAGAAA
13 192 304 gi|971434626|ref|XM_001234413.4| gi|971434626|ref|XM_001234413.4| FALSE MEIOC XM_001234413.4 unmapped "PREDICTED: Gallus gallus chromosome 27 open reading frame, human C17orf104 (C27H17ORF104), mRNA" CCACAAGTCACTGCATTAAGATTTGTTAACTAGGACATGTTGGTGTTTAAAAACAAATGG
14 192 302 gi|971400747|ref|XR_001466984.1| gi|971400747|ref|XR_001466984.1| FALSE LOC107053598 XR_001466984.1 unmapped "PREDICTED: Gallus gallus uncharacterized LOC107053598 (LOC107053598), ncRNA" ATTTCCTTACACGCTGTATGGAGTAAAGGCAAGAAAGACAGCAAGAGGCAGCAACCATGT
15 192 300 gi|971409380|ref|XM_015291262.1| gi|971409380|ref|XM_015291262.1| FALSE mast2 XM_015291262.1 unmapped "PREDICTED: Gallus gallus microtubule associated serine/threonine kinase 2 (MAST2), transcript variant X6, mRNA" GCTGCTTGGATTTCATTTCTGGACCAACTTTTGGTTTGGTTTGAGTTGTGTTTTTGTTTT
16 192 298 gi|971392412|ref|XM_004940846.2| gi|971392412|ref|XM_004940846.2| FALSE LONRF3 XM_004940846.2 unmapped "PREDICTED: Gallus gallus LON peptidase N-terminal domain and ring finger 3 (LONRF3), mRNA" GTAGATGTACTTACAATTATGTTGTACCAACAAAGTCTGTGTGAAGCGTTGTTTGCTAAT
17 192 296 gi|971433212|ref|XM_015298706.1| gi|971433212|ref|XM_015298706.1| FALSE ADIPOR1 XM_015298706.1 unmapped "PREDICTED: Gallus gallus adiponectin receptor 1 (ADIPOR1), transcript variant X1, mRNA" AGTGTTTTAGGGGAATGTAGAGCTGCTGTAGCTGATTGAAATAAAGAGGTCAATAGTTCA
18 192 294 gi|971413260|ref|XM_015292091.1| gi|971413260|ref|XM_015292091.1| FALSE SPG21 XM_015292091.1 unmapped "PREDICTED: Gallus gallus spastic paraplegia 21 (autosomal recessive, Mast syndrome) (SPG21), transcript variant X2, mRNA" CCAAGAGGATCAAGTCAGTGAGCTACTCGCGGACAATAAACATTCAACAATGTAATAGGG
19 192 292 gi|302191660|ref|NM_001193588.1| gi|302191660|ref|NM_001193588.1| FALSE TSHR NM_001193588.1 unmapped "Gallus gallus thyroid stimulating hormone receptor (TSHR), transcript variant 1, mRNA" CCTGCTATGACAATGCAAAACCAAATTCTTGCAGAAGAATGCAAGCAGACTGAGCTATGA
20 192 290 gi|971386329|ref|XM_415039.4| gi|971386329|ref|XM_415039.4| FALSE ITPKB XM_415039.4 unmapped "PREDICTED: Gallus gallus inositol-trisphosphate 3-kinase B (ITPKB), transcript variant X2, mRNA" TTATAAACCGGATCCCTCACTTGGTGGCTTCAAAAGAAGCGAACTGTTTCTCTCAGATGC

Total number of rows: 62976

Table truncated, full table size 16244 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap