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Platform GPL24606 Query DataSets for GPL24606
Status Public on Jul 25, 2018
Title Qiagen RT² Profiler Custom PCR Array CLAH22469A
Technology type RT-PCR
Distribution virtual
Organism Homo sapiens
Manufacturer Qiagen
Manufacture protocol see manufacturer's website
Catalog number CLAH22469A
 
Description Custom designed array for human samples
 
Submission date Feb 13, 2018
Last update date Feb 13, 2018
Contact name Jonathan Baio
E-mail(s) jbaio@llu.edu
Organization name Loma Linda University School of Medicine
Department Pathology and Human Anatomy
Lab Kearns-Jonker
Street address 24941 Stewart St, Room 326
City Loma Linda
State/province CA
ZIP/Postal code 92354
Country USA
 
Samples (12) GSM3001053, GSM3001054, GSM3001055, GSM3001056, GSM3001057, GSM3001058 
Series (2)
GSE110560 Real-time quantitative PCR analysis of human cardiovascular progenitor cells flown aboard the International Space Station [Custom mRNA array]
GSE110563 Real-time quantitative PCR analysis of human cardiovascular progenitor cells flown aboard the International Space Station

Data table header descriptions
ID
GB_ACC NCBI RNAseq transcipt identifier
SPOT_ID Gene symbol
Gene Name Gene name
Alias Alternative gene names
RT2 Catalog Manufacturer transcript identifier

Data table
ID GB_ACC SPOT_ID Gene Name Alias RT2 Catalog
A01 NM_033131 WNT3A "wingless-type MMTV integration site family, member 3A" "MGC119418, protein Wnt-3a, MGC119420, OTTHUMP00000035713, MGC119419" PPH02772B
A02 NM_001098209 CTNNB1 "catenin (cadherin-associated protein), beta 1, 88kDa" "CTNNB, beta-catenin, OTTHUMP00000162082, OTTHUMP00000165222, OTTHUMP00000209289, catenin beta-1, catenin (cadherin-associated protein), beta 1 (88kDa, catenin (cadherin-associated protein), beta 1 (88kD), OTTHUMP00000209288, OTTHUMP00000165223, OK/SW-cl.35" PPH00643F
A03 NM_001146156 GSK3B Glycogen synthase kinase 3 beta - PPH00787C
A04 NM_001256105 WNT5A "wingless-type MMTV integration site family, member 5A" "hWNT5A, WNT-5A protein, protein Wnt-5a, WNT-5A protein precursor, OTTHUMP00000212837, OTTHUMP00000212861" PPH02410A
A05 NM_003395 WNT9A "wingless-type MMTV integration site family, member 9A" "wingless-type MMTV integration site family, member 14, MGC138165, WNT14, OTTHUMP00000035712, protein Wnt-9a" PPH02773H
A06 NM_001664 RHOA "Ras homolog gene family, member A" ARH12/ARHA/RHO12/RHOH12 PPH00305G
A07 NM_001039802 CDC42 cell division cycle 42 "G25K, OTTHUMP00000002834, OTTHUMP00000002927, growth-regulating protein, small GTP binding protein, cell division cycle 42, cell division control protein 42 homolog, GTP-binding protein, 25kD, GTP binding protein, 25kDa, OTTHUMP00000002926, dJ224A6.1.1 (cell division cycle 42 (GTP-binding protein, 25kD)), small GTP binding protein CDC42, cell division cycle 42 (GTP-binding protein, 25kD), CDC42Hs, G25K GTP-binding protein, cell division cycle 42 (GTP binding protein, 25kD), dJ224A6.1.2 (cell division cycle 42 (GTP-binding protein, 25kD)), RP1-224A6.5" PPH00729E
A08 NM_006908 RAC1 "ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)" "ras-related C3 botulinum toxin substrate 1, TC-25, rho family, small GTP binding protein Rac1, ras-like protein TC25, OTTHUMP00000151196, ras-related C3 botulinum toxin substrate 1 isoform Rac1, cell migration-inducing gene 5 protein, ras-related C3 botulinum toxin substrate 1 isoform Rac1b, migration-inducing protein 5, MGC111543, OTTHUMP00000151197, MIG5, migration-inducing gene 5, p21-Rac1" PPH00733F
A09 NM_002660 PLCG1 "phospholipase C, gamma 1" "PLC1, PLC148, 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1, OTTHUMP00000178982, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1, PLCgamma1, inositoltrisphosphohydrolase, PLC-gamma-1, phospholipase C gamma 1, phosphoinositide phospholipase C, triphosphoinositide phosphodiesterase, 1-phosphatidyl-D-myo-inositol-4,5-bisphosphate, phospholipase C-148, PLC-148, PLC-II, monophosphatidylinositol phosphodiesterase, OTTHUMP00000031787, phospholipase C, gamma 1 (formerly subtype 148), phospholipase C-gamma-1, phosphoinositidase C, phosphatidylinositol phospholipase C, 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1, phosphoinositide phospholipase C-gamma-1, phospholipase C-II, RP3-511B24.2" PPH00710A
A10 NM_001099952 ITPR1 "inositol 1,4,5-trisphosphate receptor, type 1" "IP3R, spinocerebellar ataxia 16, inositol 1,4,5-trisphosphate receptor type 1, type 1 InsP3 receptor, inositol 1,4,5-triphosphate receptor, type 1, IP3 receptor, Insp3r1, type 1 inositol 1,4,5-trisphosphate receptor, OTTHUMP00000207085, OTTHUMP00000209578, spinocerebellar ataxia 15, IP3R1, IP3R 1, OTTHUMP00000207084, protein phosphatase 1, regulatory subunit 94" PPH12766A
A11 NM_001165928 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) "dystroglycan 1, dystroglycan, DAG, 156DAG, OTTHUMP00000210857, OTTHUMP00000210844, A3a, alpha-dystroglycan, beta-dystroglycan, Dystrophin-associated glycoprotein-1, AGRNR, OTTHUMP00000210858" PPH10009A
A12 NM_002737 PRKCA "Protein kinase C, alpha" "PKCA, protein kinase C, alpha polypeptide, PKC-A, MGC129900, protein kinase C alpha type, PKC-alpha, PRKACA, aging-associated gene 6, AAG6, MGC129901" PPH00977C
B01 NM_001178130 EGF Epidermal growth factor HOMG4/URG PPH00137B
B02 NM_005228 EGFR Epidermal growth factor receptor ERBB/ERBB1/HER1/NISBD2/PIG61/mENA PPH00138B
B03 NM_001127891 MMP2 "matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)" "CLG4, MMP-2, 72 kDa gelatinase, OTTHUMP00000164261, gelatinase neutrophil, MONA, matrix metalloproteinase 2, MMP-II, CLG4A, 72 kDa type IV collagenase, neutrophil gelatinase, matrix metalloproteinase 2 (gelatinase A, 72kD gelatinase, 72kD type IV collagenase), 72kD type IV collagenase, TBE-1, matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase), matrix metalloproteinase-II, gelatinase A, matrix metalloproteinase-2, collagenase type IV-A" PPH00151B
B04 NM_002423 MMP7 "Matrix metallopeptidase 7 (matrilysin, uterine)" MMP-7/MPSL1/PUMP-1 PPH00809E
B05 NM_002086 GRB2 Growth factor receptor-bound protein 2 ASH/EGFRBP-GRB2/Grb3-3/MST084/MSTP084/NCKAP2 PPH00714C
B06 NM_000660 TGFB1 "transforming growth factor, beta 1" "CED, transforming growth factor, beta 1, Camurati-Engelmann disease, DPD1, diaphyseal dysplasia 1, progressive, transforming growth factor, beta 1 (Camurati-Engelmann disease), transforming growth factor beta 1, transforming growth factor-beta 1, TGF-beta-1, transforming growth factor beta-1, TGFB, latency-associated peptide, TGF-beta 1 protein, prepro-transforming growth factor beta-1" PPH00508A
B07 NM_002880 RAF1 V-raf-1 murine leukemia viral oncogene homolog 1 CMD1NN/CRAF/NS5/Raf-1/c-Raf PPH00227F
B08 NM_000020 ACVRL1 activin A receptor type II-like 1 "HHT, ORW2, ALK-1, HHT2, Activin A receptor, type II-like kinase 1, ALK1, SKR3, TGF-B superfamily receptor type I, serine/threonine-protein kinase receptor R3, ACVRLK1, activin receptor-like kinase 1" PPH01915F

Total number of rows: 96

Table truncated, full table size 25 Kbytes.




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