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Platform GPL2544 Query DataSets for GPL2544
Status Public on Jun 15, 2006
Title DNA_Tags_3
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer Affymetrix
Manufacture protocol Affymetrix standard procedures
Catalog number 510318
 
Description The TAG3 array contains oligonucleotide sequences used to detect the "barcode" sequences replacing each ORF in the Saccharomyces cerevisiae deletion series
 
Submission date Jun 14, 2005
Last update date Jun 15, 2006
Contact name Timothy Hammond
E-mail(s) thammond@tulane.edu
Organization name Tulane University Health Sciences Center
Department Department of Medicine, Nephrology Section, SL-45
Street address 1430 Tulane Ave
City New Orleans
State/province LA
ZIP/Postal code 70115
Country USA
 
Samples (6) GSM60970, GSM60971, GSM60977, GSM60980, GSM60983, GSM60986
Series (1)
GSE2818 Gene expression and survival changes in Saccharomyces cerevisiae during suspension culture.

Data table header descriptions
ID
SEQUENCE sequence of tag used as probe
ORF Saccharomyces cerevisiae open reading frame that was deleted and replaced with tag sequence
TAG_TYPE Most ORFs are replaced by two tags: the (U) uptag and (D) downtag. A small number have only a (S) single tag. Tags not associated with an ORF are (B) background

Data table
ID SEQUENCE ORF TAG_TYPE
tag_9999_at AGACACTAGACATTCTCAGC YLR282C U
tag_9998_at TACACATCTAGGAACTCAGC YLR281C U
tag_9997_at GAGATCCCATAATCATCAGC YLR280C U
tag_9996_at CATAACTTAGCCGAATCAGC YLR279W U
tag_9995_at AGTGTTACCACATCGGCAGC YLR278C U
tag_9994_at TAAGACACGTCCGAAGCAGC YLR277C U
tag_9993_at AGGAGCATCACAGATCCAGC YLR276C U
tag_9992_at TGAATACATGGGAAGCCAGC YLR275W U
tag_9991_at ATGAGGTACACAGTCCCAGC YLR274W U
tag_9990_at TTGAGATTCACCAGACCAGC YLR273C U
tag_999_at GCTCCACTATTATATCAGCG YHR032W U
tag_9989_at GAGATTAGCCACACTACAGC YLR272C U
tag_9988_at GATCACACTTACGGAACAGC YLR271W U
tag_9987_at GACTCGAATCCACGTTAAGC YLR270W U
tag_9986_at GTCCACCATATAACGTAAGC YLR269C U
tag_9985_at TCCAGAGCTAGGAAGTAAGC YLR268W U
tag_9984_at CCATCGAGATAACGCTAAGC YLR267W U
tag_9983_at GGATGACCACCAGACTAAGC YLR266C U
tag_9982_at GCGTTACACAGATCATAAGC YLR265C U
tag_9981_at GCCCGTTAGAGTAAATAAGC YLR264W U

Total number of rows: 16269

Table truncated, full table size 656 Kbytes.




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Supplementary data files not provided
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