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Platform GPL26057 Query DataSets for GPL26057
Status Public on Jan 17, 2019
Title Agilent-017821 Feng new 17p4x44-01
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
 
Submission date Jan 16, 2019
Last update date Jan 17, 2019
Contact name Michelle C. Barton
E-mail(s) mbarton@mdanderson.org
Organization name The University of Texas MD Anderson Cancer Center
Department Department of Epigenetics and Molecular Carcinogenesis,
Street address 6767 Bertner St. Unit Number: 1000 Room Number: S9.8116B
City HOUSTON
State/province TEXAS
ZIP/Postal code 77030
Country USA
 
Samples (31) GSM3565155, GSM3565156, GSM3565157, GSM3565158, GSM3565159, GSM3565160 
Series (2)
GSE125207 Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2 [I]
GSE125210 Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2

Data table header descriptions
ID Agilent feature number
COL Column
ROW Row
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBank Accession number
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
SEQUENCE

Data table
ID COL ROW SPOT_ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND SEQUENCE
1 266 170 HsCGHBrightCorner pos NA
2 266 168 DarkCorner pos NA
3 266 166 DarkCorner pos NA
4 266 164 DarkCorner pos NA
5 266 162 DarkCorner pos NA
6 266 160 DarkCorner pos NA
7 266 158 DarkCorner pos NA
8 266 156 DarkCorner pos NA
9 266 154 DarkCorner pos NA
10 266 152 DarkCorner pos NA
11 266 150 DarkCorner pos NA
12 266 148 A_16_P03203104 FALSE NM_001100398 RAP1GAP2 RAP1 GTPase activating protein 2 ref|NM_001100398|ref|NM_015085 chr17:2704797-2704856 hs|p13.3 TTTTTATCACTTTAATTTTTATGTGAACTCCCAATCCTGGCAGTGACTTTCTGACATTCC
13 266 146 A_16_P03218094 FALSE chr17:13657969-13658028 hs|p12 CCACTCTCTGATTTTATAAAATACTTAATATCTATAACATTCTTCTTAAAGACTCATACA
14 266 144 A_16_P03226068 FALSE chr17:21175673-21175719 hs|p11.2 CACGAGACTGCATAAATGATCTCACTCCAGGGAGGTGGCTGTTATTG
15 266 142 A_16_P03209381 FALSE NM_020877 DNAH2 dynein, axonemal, heavy chain 2 ref|NM_020877 chr17:7673860-7673908 hs|p13.1 AATTTCTCTCCACAGGCTTTACAAAACATTGCCAAGACCTGGGATGTGA
16 266 140 A_16_P03223025 FALSE NM_001033551 TOM1L2 target of myb1-like 2 (chicken) ref|NM_001033551|ref|NM_001082968 chr17:17766073-17766117 hs|p11.2 CTCTCGTCTGGGCAAACATGTCAAAGCCGTCACGGGGATTACATT
17 266 138 A_16_P40735625 FALSE NM_003342 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) ref|NM_003342 chr17:4231662-4231721 hs|p13.2 AAAGCCCTTTACTACCGTATGCATACAAAAAAAGTTCTTCCCTTGGGTGATTTAATAGAC
18 266 136 A_16_P03222307 FALSE chr17:17289116-17289166 hs|p11.2 GTCAGGGAAAGAGCGGGACTCATCTTTGTGTCCAAAATAATATGAGCAGTC
19 266 134 A_16_P20607427 FALSE NM_001031806 ALDH3A2 aldehyde dehydrogenase 3 family, member A2 ref|NM_001031806|ref|NM_000382 chr17:19560285-19560344 hs|p11.2 CTTTGTGGGCAAAACAAGTGTTCCTCATTTTTTAACTGTGAATAACATCTTGCATCTGAA
20 266 132 A_16_P03227868 FALSE chr17:26233584-26233643 hs|q11.2 TGAATAATCAGTCCCCAAATAATTTAGAGTCAACTACACGTAAACTTTAAGCAGCAGCCA

Total number of rows: 45220

Table truncated, full table size 7322 Kbytes.




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