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Platform GPL26258 Query DataSets for GPL26258
Status Public on Mar 07, 2019
Title NimbleGen GeoChip v.4.2
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Fungi
Manufacturer NimbleGen
Manufacture protocol see manufacturer's web site www.nimblegen.com
 
 
Submission date Mar 06, 2019
Last update date Mar 07, 2019
Contact name Jingmin Cheng
E-mail(s) chengjm17@mails.tsinghua.edu.cn
Organization name Tsinghua University
Department School of Environment
Street address NO. 30 Shuangqing Road, Haidian District
City Biejing
ZIP/Postal code 100084
Country China
 
Samples (12) GSM3656148, GSM3656149, GSM3656150, GSM3656151, GSM3656152, GSM3656153 
Series (1)
GSE127899 GeoChip data from fungal community in Alaskan tundra soil

Data table header descriptions
ID
PT_GI
Gene.name Name/symbol of gene detected
Gene.category Categories according to gene function
Sub.category1 Coarse division of gene categories
Sub.category2 Fine division of gene categories
Lineage Phylogenetic information of organism

Data table
ID PT_GI Gene.name Gene.category Sub.category1 Sub.category2 Lineage
212528430 212528430 ABC_antibiotic_transporter Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei;
225679404 225679404 Tet Antibiotic resistance other superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;genus:Paracoccidioides;species:Paracoccidioides brasiliensis;
212527162 212527162 ABC_antibiotic_transporter Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Penicillium;species:Penicillium marneffei;
242766628 242766628 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242805075 242805075 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242804434 242804434 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
218713820 218713820 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242772374 242772374 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242784816 242784816 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242773510 242773510 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
218718868 218718868 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
258566824 258566824 B_lactamase_C Antibiotic resistance Beta-lactamases superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii;
242797250 242797250 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242793959 242793959 ABC_antibiotic_transporter Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242816268 242816268 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242770468 242770468 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
242794926 242794926 MFS_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Talaromyces;species:Talaromyces stipitatus;
259487609 259487609 Tet Antibiotic resistance other superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Emericella;species:Emericella nidulans;
238495620 238495620 MATE_antibiotic Antibiotic resistance transporter superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Eurotiales;family:Trichocomaceae;genus:Aspergillus;species:Aspergillus flavus;
237905066 237905066 Tet Antibiotic resistance other superkingdom:Eukaryota;kingdom:Fungi;phylum:Ascomycota;class:Eurotiomycetes;order:Onygenales;family:Onygenaceae;genus:Uncinocarpus;species:Uncinocarpus reesii;

Total number of rows: 4499

Table truncated, full table size 968 Kbytes.




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