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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jul 26, 2019 |
Title |
ORB MiRBase 17 Multispecies MicroRNA Microarray |
Technology type |
spotted oligonucleotide |
Distribution |
custom-commercial |
Organisms |
Homo sapiens; Mus musculus; Rattus norvegicus |
Manufacturer |
Microarrays, Inc. |
Manufacture protocol |
Proprietary spotting of DNA oligonucleotides containing dimer or trimer repeat of reverse complement of target sequence.
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Submission date |
May 13, 2019 |
Last update date |
Jul 26, 2019 |
Contact name |
Nancy Lan Guo |
E-mail(s) |
lguo@hsc.wvu.edu
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Phone |
3042936455
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Organization name |
West Virginia University
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Department |
Occupational and Environmental Health Sciences
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Lab |
Mary Babb Randolph Cancer Center/Guo Laboratory
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Street address |
2816 Health Sciences Center
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City |
Morgatown |
State/province |
WV |
ZIP/Postal code |
26506-9300 |
Country |
USA |
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Samples (72)
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GSM3764384, GSM3764385, GSM3764386, GSM3764387, GSM3764388, GSM3764389
GSM3764390, GSM3764391, GSM3764392, GSM3764393, GSM3764394, GSM3764395, GSM3764396, GSM3764397, GSM3764398, GSM3764399, GSM3764400, GSM3764401, GSM3764402, GSM3764403, GSM3764404, GSM3764405, GSM3764406, GSM3764407, GSM3764408, GSM3764409, GSM3764410, GSM3764411, GSM3764412, GSM3764413, GSM3764414, GSM3764415, GSM3764416, GSM3764417, GSM3764418, GSM3764419, GSM3764420, GSM3764421, GSM3764422, GSM3764423, GSM3764424, GSM3764425, GSM3764426, GSM3764427, GSM3764428, GSM3764429, GSM3764430, GSM3764431, GSM3764432, GSM3764433, GSM3764434, GSM3764435, GSM3764436, GSM3764437, GSM3764438, GSM3764439, GSM3764440, GSM3764441, GSM3764442, GSM3764443, GSM3764444, GSM3764445, GSM3764446, GSM3764447, GSM3764448, GSM3764449, GSM3764450, GSM3764451, GSM3764452, GSM3764453, GSM3764454, GSM3764455
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Series (2) |
GSE131121 |
coculture SAEC and HMVEC exposed to MWCNT |
GSE131123 |
miRNA profiling of MWCNT exposed mice |
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Data table header descriptions |
ID |
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M17_hsa_miRNA_name |
miRBase 17 mature microRNA name |
miRNA_ID |
miRBase 17 microRNA - miRBase ID |
M17_hsa_miRNA_sequence |
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miRNANameCombination |
miRBase 17 miRNA name in three different species Human, Mouse and Rat |
SEQUENCE |
Probe nucleotide sequence |
Data table |
ID |
M17_hsa_miRNA_name |
miRNA_ID |
M17_hsa_miRNA_sequence |
miRNANameCombination |
SEQUENCE |
1002 |
hsa-miR-330-3p |
MIMAT0000751 |
GCAAAGCACACGGCCUGCAGAGA |
hsa-miR-330-3p |
TCTCTGCAGGCCGTGTGCTTTTCTCTGCAGGCCGTGTGCTTT |
1014 |
hsa-miR-132 |
MIMAT0000426 |
UAACAGUCUACAGCCAUGGUCG |
hsa-miR-132_mmu-miR-132_rno-miR-132 |
CGACCATGGCTGTAGACTGTTCGACCATGGCTGTAGACTGTT |
1015 |
hsa-miR-181c |
MIMAT0000258 |
AACAUUCAACCUGUCGGUGAGU |
hsa-miR-181c_mmu-miR-181c_rno-miR-181c |
ACTCACCGACAGGTTGAATGTTACTCACCGACAGGTTGAATGTT |
1021 |
hsa-miR-129-3p |
MIMAT0004605 |
AAGCCCUUACCCCAAAAAGCAU |
hsa-miR-129-3p_mmu-miR-129-2-3p_rno-miR-129-2* |
ATGCTTTTTGGGGTAAGGGCTTATGCTTTTTGGGGTAAGGGCTT |
1022 |
hsa-miR-22 |
MIMAT0000077 |
AAGCUGCCAGUUGAAGAACUGU |
hsa-miR-22_mmu-miR-22_rno-miR-22 |
ACAGTTCTTCAACTGGCAGCTTACAGTTCTTCAACTGGCAGCTT |
1033 |
hsa-let-7f |
MIMAT0000067 |
UGAGGUAGUAGAUUGUAUAGUU |
hsa-let-7f_mmu-let-7f_rno-let-7f |
AACTATACAATCTACTACCTCAAACTATACAATCTACTACCTCA |
1037 |
hsa-miR-373 |
MIMAT0000726 |
GAAGUGCUUCGAUUUUGGGGUGU |
hsa-miR-373 |
ACACCCCAAAATCGAAGCACTTACACCCCAAAATCGAAGCACTT |
1038 |
hsa-miR-369-3p |
MIMAT0000721 |
AAUAAUACAUGGUUGAUCUUU |
hsa-miR-369-3p_mmu-miR-369-3p_rno-miR-369-3p |
AAAGATCAACCATGTATTATTAAAGATCAACCATGTATTATT |
1047 |
hsa-miR-154* |
MIMAT0000453 |
AAUCAUACACGGUUGACCUAUU |
hsa-miR-154*_mmu-miR-154*_rno-miR-154* |
AATAGGTCAACCGTGTATGATTAATAGGTCAACCGTGTATGATT |
1052 |
hsa-miR-367 |
MIMAT0000719 |
AAUUGCACUUUAGCAAUGGUGA |
hsa-miR-367_mmu-miR-367 |
TCACCATTGCTAAAGTGCAATTTCACCATTGCTAAAGTGCAATT |
1054 |
hsa-miR-92a |
MIMAT0000092 |
UAUUGCACUUGUCCCGGCCUGU |
hsa-miR-92a |
ACAGGCCGGGACAAGTGCAATAACAGGCCGGGACAAGTGCAATA |
1063 |
hsa-miR-99b |
MIMAT0000689 |
CACCCGUAGAACCGACCUUGCG |
hsa-miR-99b_mmu-miR-99b_rno-miR-99b |
CAAGGTCGGTTCTACGGGTCAAGGTCGGTTCTACGGGT |
1064 |
hsa-miR-100 |
MIMAT0000098 |
AACCCGUAGAUCCGAACUUGUG |
hsa-miR-100_mmu-miR-100_rno-miR-100 |
CACAAGTTCGGATCTACGGGTCACAAGTTCGGATCTACGGGT |
1068 |
hsa-miR-99a |
MIMAT0000097 |
AACCCGUAGAUCCGAUCUUGUG |
hsa-miR-99a_mmu-miR-99a_rno-miR-99a |
CACAAGATCGGATCTACGGGTCACAAGATCGGATCTACGGGT |
1078 |
hsa-miR-373* |
MIMAT0000725 |
ACUCAAAAUGGGGGCGCUUUCC |
hsa-miR-373* |
GAAAGCGCCCCCATTTTGAGTGAAAGCGCCCCCATTTTGAGT |
1082_3 |
hsa-miR-324-3p |
MIMAT0000762 |
ACUGCCCCAGGUGCUGCUGG |
hsa-miR-324-3p_mmu-miR-324-3p_rno-miR-324-3p |
AGCAGCACCTGGGGCAGTAGCAGCACCTGGGGCAGTAGCAGCACCTGGGGCAGT |
1092 |
hsa-miR-31 |
MIMAT0000089 |
AGGCAAGAUGCUGGCAUAGCU |
hsa-miR-31_mmu-miR-31_rno-miR-31 |
AGCTATGCCAGCATCTTGCCTAGCTATGCCAGCATCTTGCCT |
1098 |
hsa-miR-296-5p |
MIMAT0000690 |
AGGGCCCCCCCUCAAUCCUGU |
hsa-miR-296-5p_mmu-miR-296-5p_rno-miR-296* |
ACAGGATTGAGGGGGGGCCCTACAGGATTGAGGGGGGGCCCT |
1101 |
hsa-miR-154 |
MIMAT0000452 |
UAGGUUAUCCGUGUUGCCUUCG |
hsa-miR-154_mmu-miR-154_rno-miR-154 |
CGAAGGCAACACGGATAACCTCGAAGGCAACACGGATAACCT |
1106 |
hsa-miR-140-5p |
MIMAT0000431 |
CAGUGGUUUUACCCUAUGGUAG |
hsa-miR-140-5p_mmu-miR-140_rno-miR-140 |
CTACCATAGGGTAAAACCACTCTACCATAGGGTAAAACCACT |
Total number of rows: 1692
Table truncated, full table size 202 Kbytes.
Supplementary data files not provided |
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