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Platform GPL26659 Query DataSets for GPL26659
Status Public on Jul 26, 2019
Title ORB MiRBase 17 Multispecies MicroRNA Microarray
Technology type spotted oligonucleotide
Distribution custom-commercial
Organisms Homo sapiens; Mus musculus; Rattus norvegicus
Manufacturer Microarrays, Inc.
Manufacture protocol Proprietary spotting of DNA oligonucleotides containing dimer or trimer repeat of reverse complement of target sequence.
 
 
Submission date May 13, 2019
Last update date Jul 26, 2019
Contact name Nancy Lan Guo
E-mail(s) lguo@hsc.wvu.edu
Phone 3042936455
Organization name West Virginia University
Department Occupational and Environmental Health Sciences
Lab Mary Babb Randolph Cancer Center/Guo Laboratory
Street address 2816 Health Sciences Center
City Morgatown
State/province WV
ZIP/Postal code 26506-9300
Country USA
 
Samples (72) GSM3764384, GSM3764385, GSM3764386, GSM3764387, GSM3764388, GSM3764389 
Series (2)
GSE131121 coculture SAEC and HMVEC exposed to MWCNT
GSE131123 miRNA profiling of MWCNT exposed mice

Data table header descriptions
ID
M17_hsa_miRNA_name miRBase 17 mature microRNA name
miRNA_ID miRBase 17 microRNA - miRBase ID
M17_hsa_miRNA_sequence
miRNANameCombination miRBase 17 miRNA name in three different species Human, Mouse and Rat
SEQUENCE Probe nucleotide sequence

Data table
ID M17_hsa_miRNA_name miRNA_ID M17_hsa_miRNA_sequence miRNANameCombination SEQUENCE
1002 hsa-miR-330-3p MIMAT0000751 GCAAAGCACACGGCCUGCAGAGA hsa-miR-330-3p TCTCTGCAGGCCGTGTGCTTTTCTCTGCAGGCCGTGTGCTTT
1014 hsa-miR-132 MIMAT0000426 UAACAGUCUACAGCCAUGGUCG hsa-miR-132_mmu-miR-132_rno-miR-132 CGACCATGGCTGTAGACTGTTCGACCATGGCTGTAGACTGTT
1015 hsa-miR-181c MIMAT0000258 AACAUUCAACCUGUCGGUGAGU hsa-miR-181c_mmu-miR-181c_rno-miR-181c ACTCACCGACAGGTTGAATGTTACTCACCGACAGGTTGAATGTT
1021 hsa-miR-129-3p MIMAT0004605 AAGCCCUUACCCCAAAAAGCAU hsa-miR-129-3p_mmu-miR-129-2-3p_rno-miR-129-2* ATGCTTTTTGGGGTAAGGGCTTATGCTTTTTGGGGTAAGGGCTT
1022 hsa-miR-22 MIMAT0000077 AAGCUGCCAGUUGAAGAACUGU hsa-miR-22_mmu-miR-22_rno-miR-22 ACAGTTCTTCAACTGGCAGCTTACAGTTCTTCAACTGGCAGCTT
1033 hsa-let-7f MIMAT0000067 UGAGGUAGUAGAUUGUAUAGUU hsa-let-7f_mmu-let-7f_rno-let-7f AACTATACAATCTACTACCTCAAACTATACAATCTACTACCTCA
1037 hsa-miR-373 MIMAT0000726 GAAGUGCUUCGAUUUUGGGGUGU hsa-miR-373 ACACCCCAAAATCGAAGCACTTACACCCCAAAATCGAAGCACTT
1038 hsa-miR-369-3p MIMAT0000721 AAUAAUACAUGGUUGAUCUUU hsa-miR-369-3p_mmu-miR-369-3p_rno-miR-369-3p AAAGATCAACCATGTATTATTAAAGATCAACCATGTATTATT
1047 hsa-miR-154* MIMAT0000453 AAUCAUACACGGUUGACCUAUU hsa-miR-154*_mmu-miR-154*_rno-miR-154* AATAGGTCAACCGTGTATGATTAATAGGTCAACCGTGTATGATT
1052 hsa-miR-367 MIMAT0000719 AAUUGCACUUUAGCAAUGGUGA hsa-miR-367_mmu-miR-367 TCACCATTGCTAAAGTGCAATTTCACCATTGCTAAAGTGCAATT
1054 hsa-miR-92a MIMAT0000092 UAUUGCACUUGUCCCGGCCUGU hsa-miR-92a ACAGGCCGGGACAAGTGCAATAACAGGCCGGGACAAGTGCAATA
1063 hsa-miR-99b MIMAT0000689 CACCCGUAGAACCGACCUUGCG hsa-miR-99b_mmu-miR-99b_rno-miR-99b CAAGGTCGGTTCTACGGGTCAAGGTCGGTTCTACGGGT
1064 hsa-miR-100 MIMAT0000098 AACCCGUAGAUCCGAACUUGUG hsa-miR-100_mmu-miR-100_rno-miR-100 CACAAGTTCGGATCTACGGGTCACAAGTTCGGATCTACGGGT
1068 hsa-miR-99a MIMAT0000097 AACCCGUAGAUCCGAUCUUGUG hsa-miR-99a_mmu-miR-99a_rno-miR-99a CACAAGATCGGATCTACGGGTCACAAGATCGGATCTACGGGT
1078 hsa-miR-373* MIMAT0000725 ACUCAAAAUGGGGGCGCUUUCC hsa-miR-373* GAAAGCGCCCCCATTTTGAGTGAAAGCGCCCCCATTTTGAGT
1082_3 hsa-miR-324-3p MIMAT0000762 ACUGCCCCAGGUGCUGCUGG hsa-miR-324-3p_mmu-miR-324-3p_rno-miR-324-3p AGCAGCACCTGGGGCAGTAGCAGCACCTGGGGCAGTAGCAGCACCTGGGGCAGT
1092 hsa-miR-31 MIMAT0000089 AGGCAAGAUGCUGGCAUAGCU hsa-miR-31_mmu-miR-31_rno-miR-31 AGCTATGCCAGCATCTTGCCTAGCTATGCCAGCATCTTGCCT
1098 hsa-miR-296-5p MIMAT0000690 AGGGCCCCCCCUCAAUCCUGU hsa-miR-296-5p_mmu-miR-296-5p_rno-miR-296* ACAGGATTGAGGGGGGGCCCTACAGGATTGAGGGGGGGCCCT
1101 hsa-miR-154 MIMAT0000452 UAGGUUAUCCGUGUUGCCUUCG hsa-miR-154_mmu-miR-154_rno-miR-154 CGAAGGCAACACGGATAACCTCGAAGGCAACACGGATAACCT
1106 hsa-miR-140-5p MIMAT0000431 CAGUGGUUUUACCCUAUGGUAG hsa-miR-140-5p_mmu-miR-140_rno-miR-140 CTACCATAGGGTAAAACCACTCTACCATAGGGTAAAACCACT

Total number of rows: 1692

Table truncated, full table size 202 Kbytes.




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