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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 18, 2019 |
| Title |
GeoChip 5.0 |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organisms |
Bacteria; Archaea; Eukaryota |
| Manufacturer |
Customed Nimbergen microarray |
| Manufacture protocol |
http://www.ou.edu/ieg/tools/protocols
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| Submission date |
Jun 17, 2019 |
| Last update date |
Jun 18, 2019 |
| Contact name |
Qun Gao |
| E-mail(s) |
gao-q14@mails.tsinghua.edu.cn
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| Organization name |
Tsinghua University
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| Department |
Environmental sicence and engineering
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| Street address |
Shuang Qing Road
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| City |
Beijing |
| State/province |
Beijing |
| ZIP/Postal code |
100084 |
| Country |
China |
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| Samples (79)
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GSM3893640, GSM3893641, GSM3893642, GSM3893643, GSM3893644, GSM3893645
GSM3893646, GSM3893647, GSM3893648, GSM3893649, GSM3893650, GSM3893651, GSM3893652, GSM3893653, GSM3893654, GSM3893655, GSM3893656, GSM3893657, GSM3893658, GSM3893659, GSM3893660, GSM3893661, GSM3893662, GSM3893663, GSM3893664, GSM3893665, GSM3893666, GSM3893667, GSM3893668, GSM3893669, GSM3893670, GSM3893671, GSM3893672, GSM3893673, GSM3893674, GSM3893675, GSM3893676, GSM3893677, GSM3893678, GSM3893679, GSM3893680, GSM3893681, GSM3893682, GSM3893683, GSM3893684, GSM3893685, GSM3893686, GSM3893687, GSM3893688, GSM3893689, GSM3893690, GSM3893691, GSM3893692, GSM3893693, GSM3893694, GSM3893695, GSM3893696, GSM3893697, GSM3893698, GSM3893699, GSM3893700, GSM3893701, GSM3893702, GSM3893703, GSM3893704, GSM3893705, GSM3893706, GSM3893707, GSM3893708, GSM3893709, GSM3893710, GSM3893711, GSM3893712, GSM3893713, GSM3893714, GSM3893715, GSM3893716, GSM3893717, GSM3893718
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| Series (1) |
| GSE132839 |
Gene expression-based, through the hybridization of microbial DNA onto the designed probes on microarrys, i.e., GeoChip |
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| Data table header descriptions |
| ID |
|
| SPOT_ID |
GenPept_ID |
| Gene name |
The name of gene detected |
| Gene category |
The categories according to gene functions |
| Sub-category1 |
coarse division of gene categories |
| Sub-category2 |
fine division of gene categories |
| Organism |
The organism the gene derives from |
| Lineage |
The phylogenetic information of organism |
| Data table |
| ID |
SPOT_ID |
Gene name |
Gene category |
Sub-category1 |
Sub-category2 |
Organism |
Lineage |
| 155121777 |
155121777 |
chitinase |
algal virus |
Carbon degradation |
Chitin |
Paramecium bursaria chlorella virus MT325 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Chlorovirus;species:Paramecium bursaria Chlorella virus A1; |
| 155122477 |
155122477 |
chitinase |
algal virus |
Carbon degradation |
Chitin |
Paramecium bursaria chlorella virus MT325 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Chlorovirus;species:Paramecium bursaria Chlorella virus A1; |
| 156068180 |
156068180 |
chitinase |
algal virus |
Carbon degradation |
Chitin |
Paramecium bursaria Chlorella virus AR158 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Chlorovirus; |
| 155125081 |
155125081 |
chitinase |
algal virus |
Carbon degradation |
Chitin |
Acanthocystis turfacea Chlorella virus 1 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Chlorovirus; |
| 155371532 |
155371532 |
potassium_channel |
algal virus |
Eukaryotic |
infection |
Acanthocystis turfacea Chlorella virus 1 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Chlorovirus; |
| 13177493 |
13177493 |
potassium_channel |
algal virus |
Eukaryotic |
infection |
Ectocarpus siliculosus virus 1 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Phaeovirus; |
| 18640122 |
18640122 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Swinepox virus |
superkingdom:Viruses;family:Poxviridae;genus:Suipoxvirus; |
| 187903038 |
187903038 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Musca domestica salivary gland hypertrophy virus |
superkingdom:Viruses;family:Hytrosaviridae;genus:Muscavirus;species:Musca hytrovirus; |
| 6578562 |
6578562 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Rabbit fibroma virus |
superkingdom:Viruses;family:Poxviridae;genus:Leporipoxvirus; |
| 215820446 |
215820446 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
unknown phycodnavirus |
superkingdom:Viruses;family:Phycodnaviridae; |
| 169733985 |
169733985 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
unknown phycodnavirus |
superkingdom:Viruses;family:Phycodnaviridae; |
| 169733565 |
169733565 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
unknown phycodnavirus |
superkingdom:Viruses;family:Phycodnaviridae; |
| 33638136 |
33638136 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Squirrel parapoxvirus |
superkingdom:Viruses;family:Poxviridae; |
| 76363940 |
76363940 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Largemouth bass ranavirus |
superkingdom:Viruses;family:Iridoviridae;genus:Ranavirus;species:Santee-Cooper ranavirus; |
| 2338448 |
2338448 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Feldmannia species virus |
superkingdom:Viruses;family:Phycodnaviridae;genus:Phaeovirus; |
| 32891961 |
32891961 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
unknown phycodnavirus |
superkingdom:Viruses;family:Phycodnaviridae; |
| 215820424 |
215820424 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
unknown phycodnavirus |
superkingdom:Viruses;family:Phycodnaviridae; |
| 9944573 |
9944573 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Amsacta moorei entomopoxvirus _L_ |
superkingdom:Viruses;family:Poxviridae;genus:Betaentomopoxvirus; |
| 169733631 |
169733631 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
unknown phycodnavirus |
superkingdom:Viruses;family:Phycodnaviridae; |
| 155123441 |
155123441 |
NCLDV_dna_polymerase |
algal virus |
Eukaryotic |
replication |
Paramecium bursaria Chlorella virus FR483 |
superkingdom:Viruses;family:Phycodnaviridae;genus:Chlorovirus;species:Paramecium bursaria Chlorella virus A1; |
Total number of rows: 81515
Table truncated, full table size 19003 Kbytes.
| Supplementary data files not provided |
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