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Platform GPL272 Query DataSets for GPL272
Status Public on Jun 17, 2003
Title LC-20
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
 
Description Tip Configuration: Standard 48 tip
Columns per Sector: 28
Rows per Sector: 28
Column Spacing: 157
Row Spacing: 157
 
Submission date Mar 13, 2003
Last update date Jan 18, 2013
Contact name Xin Chen
E-mail(s) xinchen@cmgm.stanford.edu
Phone 650-736-0075
Organization name Stanford University
Department Biochemistry
Lab Brown
Street address
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (1) GSM4842
Series (1)
GSE343 Molecular heterogeneity in acute renal allograft rejection

Data table header descriptions
ID unique spot identifier
NAME name of spot
CLONE_ID cDNA clone identifier
GENE_SYM gene symbol
GENE_NAME gene name, description
CLUSTER_ID NCBI UniGene cluster identifier
GB_ACC GenBank accession number
PREFERRED_NAME preferred gene name
GENE Entrez GENE ID
SECTOR spot sector grid coordinate
SECTORROW spot row grid coordinate
SECTORCOL spot column grid coordinate
SOURCE source
PLATEID clone plate identifier
PROW clone plate row
PCOL clone plate column
FAILED did PCR fail, 0 means one distinct band - success
IS_VERIFIED is verified, default no (N)
IS_CONTAMINATED is contaminated, default unknown (U)
LUID laboratory unique identifier

Data table
ID NAME CLONE_ID GENE_SYM GENE_NAME CLUSTER_ID GB_ACC PREFERRED_NAME GENE SECTOR SECTORROW SECTORCOL SOURCE PLATEID PROW PCOL FAILED IS_VERIFIED IS_CONTAMINATED LUID
1 122634 IMAGE:51710 Homo sapiens, clone IMAGE:3605655, mRNA 335274 H22916 1 1 1 RGSV:96(240B1):384(PRT1060D1) 4297 D 1 0 N U 522957
2 10782 IMAGE:854198 ESTs 191864 AA669377 1 1 2 RGSV:96(240B7):384(PRT1060D13) 4297 D 13 0 N U 522963
3 122719 IMAGE:856567 HSPA4 heat shock 70kDa protein 4 90093 AA633656 3308 1 1 3 RGSV:96(240D1):384(PRT1060H1) 4297 H 1 0 N U 522981
4 122731 IMAGE:884720 Homo sapiens, clone IMAGE:4816505, mRNA 114073 AA629559 1 1 4 RGSV:96(240D7):384(PRT1060H13) 4297 H 13 0 N U 522987
5 122814 IMAGE:859906 EST 117164 AA679487 1 1 5 RGSV:96(240F1):384(PRT1060L1) 4297 L 1 0 N U 523005
6 122826 IMAGE:294196 LNK lymphocyte adaptor protein 13131 N71394 10019 1 1 6 RGSV:96(240F7):384(PRT1060L13) 4297 L 13 0 N U 523011
7 113073 IMAGE:220135 ESTs, Weakly similar to hypothetical protein FLJ13964 [Homo sapiens] [H.sapiens] 433824 H84734 1 1 7 RGSV:96(240H1):384(PRT1060P1) 4297 P 1 0 N U 523029
8 122913 IMAGE:433184 ZHX1 zinc-fingers and homeoboxes 1 12940 AA680145 11244 1 1 8 RGSV:96(240H7):384(PRT1060P13) 4297 P 13 0 N U 523035
9 154669 IMAGE:1303536 EST 291344 AA731476 Unknown 1 1 9 LC:96(LC127B1):384(LC384-245D1) 2591 D 1 0 N U 12109
10 154675 IMAGE:1303661 ESTs 373993 AA765278 Unknown 1 1 10 LC:96(LC127B7):384(LC384-245D13) 2591 D 13 0 N U 12115
11 154693 IMAGE:1303779 ESTs 369382 AA765387 Unknown UG 145095 ESTs sc_id6119 1 1 11 LC:96(LC127D1):384(LC384-245H1) 2591 H 1 0 N U 12133
12 154699 IMAGE:1303838 ESTs 372221 AA765560 Unknown sc_id6151 1 1 12 LC:96(LC127D7):384(LC384-245H13) 2591 H 13 0 N U 12139
13 154717 IMAGE:1304021 AGO4 argonaute 4 134757 AA765419 Unknown UG 88194 ESTs sc_id922 54791 1 1 13 LC:96(LC127F1):384(LC384-245L1) 2591 L 1 0 N U 12157
14 154723 IMAGE:1304144 AA765323 Unknown 1 1 14 LC:96(LC127F7):384(LC384-245L13) 2591 L 13 0 N U 12163
15 154741 IMAGE:1304317 ESTs, Weakly similar to hypothetical protein FLJ20294 [Homo sapiens] [H.sapiens] 431796 AA765760 Unknown UG 124929 ESTs 1 1 15 LC:96(LC127H1):384(LC384-245P1) 2591 P 1 0 N U 12181
16 154747 IMAGE:1304346 ESTs 122833 AA765597 Unknown UG 122833 ESTs sc_id4266 1 1 16 LC:96(LC127H7):384(LC384-245P13) 2591 P 13 0 N U 12187
17 20062 IMAGE:24918 PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 78406 R39069 8395 1 1 17 RGSV:96(95B1):384(LC384-223D1) 2618 D 1 0 N U 509037
18 20074 IMAGE:259842 PMPCB peptidase (mitochondrial processing) beta 184211 N29844 9512 1 1 18 RGSV:96(95B7):384(LC384-223D13) 2618 D 13 0 N U 509043
19 20156 IMAGE:884539 ENDOG endonuclease G 420106 AA629804 2021 1 1 19 RGSV:96(95D1):384(LC384-223H1) 2618 H 1 0 N U 509061
20 20168 IMAGE:361239 RBBP6 retinoblastoma binding protein 6 91065 AA016290 5930 1 1 20 RGSV:96(95D7):384(LC384-223H13) 2618 H 13 0 N U 509067

Total number of rows: 37632

Table truncated, full table size 5783 Kbytes.




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