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Status
Public on Jan 19, 2022
Title
Agilent-034879 ADchip_1.0 033934 (Probe name version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16034879 or 2534879. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. In 034879_D_GEO_20111025.txt, the ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
Submission date
Oct 01, 2019
Last update date
Jan 19, 2022
Contact name
Kristin Reiche
E-mail(s)
kristin.reiche@izi.fraunhofer.de
Organization name
Fraunhofer Institute for Cell Therapy and Immunology
Department
Diagnostics
Street address
Perlickstr. 1
City
Leipzig
ZIP/Postal code
04103
Country
Germany
Samples (36)
GSM4103849 , GSM4103850 , GSM4103851 , GSM4103852 , GSM4103853 , GSM4103854
GSM4103855 ,
GSM4103856 ,
GSM4103857 ,
GSM4103858 ,
GSM4103859 ,
GSM4103860 ,
GSM4103861 ,
GSM4103862 ,
GSM4103863 ,
GSM4103864 ,
GSM4103865 ,
GSM4103866 ,
GSM4103867 ,
GSM4103868 ,
GSM4103869 ,
GSM4103870 ,
GSM4103871 ,
GSM4103872 ,
GSM4103873 ,
GSM4103874 ,
GSM4103875 ,
GSM4103876 ,
GSM4103877 ,
GSM4103878 ,
GSM4103879 ,
GSM4103880 ,
GSM4103881 ,
GSM4103882 ,
GSM4103883 ,
GSM4103884
Series (2)
GSE138260
Differential expression analysis of human brain samples with Alzheimer disease versus healthy control samples
GSE138261
Alzheimer-related genes show accelerated evolution
Data table header descriptions
ID
Agilent Probe name
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
REFSEQ
RefSeqAccession
GB_ACC
GenBankAccession
LOCUSLINK_ID
LocuslinkID
GENE_SYMBOL
Gene Symbol
GENE_NAME
Gene Name
UNIGENE_ID
UnigeneID
ENSEMBL_ID
EnsemblID
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
CYTOBAND
Cytoband
DESCRIPTION
Description
GO_ID
GoIDs
SEQUENCE
Sequence
Data table
ID
SPOT_ID
CONTROL_TYPE
REFSEQ
GB_ACC
LOCUSLINK_ID
GENE_SYMBOL
GENE_NAME
UNIGENE_ID
ENSEMBL_ID
ACCESSION_STRING
CHROMOSOMAL_LOCATION
CYTOBAND
DESCRIPTION
GO_ID
SEQUENCE
GE_BrightCorner
GE_BrightCorner
pos
DarkCorner
DarkCorner
pos
ACUST_109502_PI426217857
ACUST_109502_PI426217857
FALSE
unmapped
TAAGCAGAGATTGACAGAGATAAGCTTCTAAGACCTTTCAGGCCCCAGAGTGTGACTGTT
ACUST_137079_PI426217852
ACUST_137079_PI426217852
FALSE
unmapped
AGATCTTCTGCCAGAGCCCTTGGGCTTCCACATCTCATCAGCCTGGGCTCTGAGGCCCCA
ACUST_23063_PI426217863
ACUST_23063_PI426217863
FALSE
unmapped
CAAGATTTAAGTACCAAGGTACTTAATGTGCCCAGTTTTGTGTCTGAATTAACAGATCTT
ACUST_2779_PI426418814
ACUST_2779_PI426418814
FALSE
unmapped
CGTGGTTCCCGGTGGTTGCGCTCCCCGTTTCGTCCCCTCCGTGAGCATCGGCGCTTACCG
ACUST_1296_PI426217872
ACUST_1296_PI426217872
FALSE
unmapped
GGGAAAGTCTGACTTTCTCTTGTAACCCAGAGCTGGATCTAAGCATTTCTATCATCCCCA
ACUST_232101_PI426226247
ACUST_232101_PI426226247
FALSE
unmapped
CTGCCGCAACAGAAATTGTTTTTATTTCATGTAAAATAAGGGATCAATTTCAAACCCTGC
ACUST_64165_PI426217857
ACUST_64165_PI426217857
FALSE
unmapped
TGGCGGCCCTCCTGGGCAGCTGGGCACATGTAGGCTCTCCCTGAGTAACCTGGGCTCTGC
ACUST_51793_PI426217869
ACUST_51793_PI426217869
FALSE
unmapped
AGGATCCTCACAGCCACATACCCCCAAATGTTCCCATAATCCTCTCTGCTTCTACTTACA
ACUST_120459_PI426217852
ACUST_120459_PI426217852
FALSE
unmapped
AATGCAAGCCATAGTAATTGGCTTTGCCCTCAGACAGCTGAGTCAGCATGAAATCTAGCA
ACUST_46156_PI426217852
ACUST_46156_PI426217852
FALSE
unmapped
TTGATGAGAAAAATCTGACAGTTCTCAGCCCCAAGCAAGAGAAACCTGGGTTTGGTCATG
ACUST_8858_PI426226230
ACUST_8858_PI426226230
FALSE
unmapped
CAGTGACGAAGAAGAAATGAAAGTATTGCTAGGAAGCTTGATGGACTCTTCTAGAGAAAA
ACUST_2822_PI426418836
ACUST_2822_PI426418836
FALSE
unmapped
TGAACGCAGCGTGGTGAGTGCGTCACTGCCTGCGCCACCGCCTTCTTTCCCTCTTTCCTT
ACUST_2068_PI426418814
ACUST_2068_PI426418814
FALSE
unmapped
CTTGATTTATAAAGAAAATAAAAGTTATTTTCTAAATGGTTTGATTTCCAAGGAACAGGG
ACUST_100572_PI426217852
ACUST_100572_PI426217852
FALSE
unmapped
TGTCAGGGATGAGCCACTTGAAGACCTCACTGCTCCTCAGACGGATGGCGGCCCAGTCCT
ACUST_36561_PI426226233
ACUST_36561_PI426226233
FALSE
unmapped
GCGAGCCCGAGCCCTCAAGGCCGGAGACCCGGCGGCAGCGCGGCCTCAACTTTCCCAGCC
ACUST_38214_PI426217869
ACUST_38214_PI426217869
FALSE
unmapped
GAGACTTGTTATCAAGTCTGTTATAAAACAGGTTGTAGAAACCTTTCAGGCTGAAATCTG
ACUST_135130_PI426217852
ACUST_135130_PI426217852
FALSE
unmapped
ACTGTAGGGGAGGAGAAAGCATTTGTTGTGCAGCCACTTAAAATGTATCTTGCCTGCAGA
ACUST_1456_PI426368334
ACUST_1456_PI426368334
FALSE
unmapped
TGACATTGAGATGGATGAAGCCATTTGTTGGCATTATCAGAACCAGCTGTGTGCTTGGCT
Total number of rows: 947673 Table truncated, full table size 142203 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL27556_034879_D_GEO_20111025.txt.gz
46.2 Mb
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