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Platform GPL27601 Query DataSets for GPL27601
Status Public on Oct 12, 2019
Title LC_MRA-1003_miRRat_20
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Rattus norvegicus
Manufacturer LC Sciences
Manufacture protocol Rat miRNA microarray with 100% coverage of mature miRNAs listed in miRBase version 20. Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://miRBase.org) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. The detection probes are made by in situ synthesis using PGR (photogenerated reagent) chemistry.
 
 
Submission date Oct 11, 2019
Last update date Oct 12, 2019
Contact name Qingjie Li
E-mail(s) quli@utmb.edu
Organization name University of Texas Medical Branch
Department Internal Medicine
Street address 301 University Blvd
City Galveston
State/province Texas
ZIP/Postal code 77555
Country USA
 
Samples (12) GSM4119049, GSM4119050, GSM4119051, GSM4119052, GSM4119053, GSM4119054 
Series (1)
GSE138770 Neonatal injury increases gut permeability by epigenetically suppressing E-cadherin in adulthood

Data table header descriptions
ID
miRNA_ID
Reporter BioSequence Database Entry[mirna]
Reporter BioSequence Type
Reporter BioSequence Polymer Type
Reporter Group [role]
Reporter Control Type
Reporter Comment
SPOT_ID

Data table
ID miRNA_ID Reporter BioSequence Database Entry[mirna] Reporter BioSequence Type Reporter BioSequence Polymer Type Reporter Group [role] Reporter Control Type Reporter Comment SPOT_ID
rno-let-7a-1-3p rno-let-7a-1-3p "MIMAT0017085,MIMAT0017088" ss_oligo DNA experimental Target Seq (5' to 3') CUAUACAAUCUACUGUCUUUCC
rno-let-7a-2-3p rno-let-7a-2-3p MIMAT0017086 ss_oligo DNA experimental Target Seq (5' to 3') CUGUACAGCCUCCUAGCUUUCC
rno-let-7a-5p rno-let-7a-5p MIMAT0000774 ss_oligo DNA experimental Target Seq (5' to 3') UGAGGUAGUAGGUUGUAUAGUU
rno-let-7b-3p rno-let-7b-3p MIMAT0004705 ss_oligo DNA experimental Target Seq (5' to 3') CUAUACAACCUACUGCCUUCCC
rno-let-7b-5p rno-let-7b-5p MIMAT0000775 ss_oligo DNA experimental Target Seq (5' to 3') UGAGGUAGUAGGUUGUGUGGUU
rno-let-7c-1-3p rno-let-7c-1-3p MIMAT0017087 ss_oligo DNA experimental Target Seq (5' to 3') CUGUACAACCUUCUAGCUUUCC
rno-let-7c-5p rno-let-7c-5p MIMAT0000776 ss_oligo DNA experimental Target Seq (5' to 3') UGAGGUAGUAGGUUGUAUGGUU
rno-let-7d-3p rno-let-7d-3p MIMAT0000563 ss_oligo DNA experimental Target Seq (5' to 3') CUAUACGACCUGCUGCCUUUCU
rno-let-7d-5p rno-let-7d-5p MIMAT0000562 ss_oligo DNA experimental Target Seq (5' to 3') AGAGGUAGUAGGUUGCAUAGUU
rno-let-7e-3p rno-let-7e-3p MIMAT0004706 ss_oligo DNA experimental Target Seq (5' to 3') CUAUACGGCCUCCUAGCUUUCC
rno-let-7e-5p rno-let-7e-5p MIMAT0000777 ss_oligo DNA experimental Target Seq (5' to 3') UGAGGUAGGAGGUUGUAUAGUU
rno-let-7f-1-3p rno-let-7f-1-3p MIMAT0017089 ss_oligo DNA experimental Target Seq (5' to 3') CUAUACAAUCUAUUGCCUUCC
rno-let-7f-2-3p rno-let-7f-2-3p MIMAT0017090 ss_oligo DNA experimental Target Seq (5' to 3') CUAUACAGUCUACUGUCUUUC
rno-let-7f-5p rno-let-7f-5p MIMAT0000778 ss_oligo DNA experimental Target Seq (5' to 3') UGAGGUAGUAGAUUGUAUAGUU
rno-let-7i-3p rno-let-7i-3p MIMAT0004707 ss_oligo DNA experimental Target Seq (5' to 3') CUGCGCAAGCUACUGCCUUGCU
rno-let-7i-5p rno-let-7i-5p MIMAT0000779 ss_oligo DNA experimental Target Seq (5' to 3') UGAGGUAGUAGUUUGUGCUGUU
rno-miR-1-3p rno-miR-1-3p MIMAT0003125 ss_oligo DNA experimental Target Seq (5' to 3') UGGAAUGUAAAGAAGUGUGUAU
rno-miR-1-5p rno-miR-1-5p MIMAT0003162 ss_oligo DNA experimental Target Seq (5' to 3') GCACAUACUUCUUUAUGUACCC
rno-miR-7a-1-3p rno-miR-7a-1-3p MIMAT0000607 ss_oligo DNA experimental Target Seq (5' to 3') ACAACAAAUCACAGUCUGCCAU
rno-miR-7a-2-3p rno-miR-7a-2-3p MIMAT0017091 ss_oligo DNA experimental Target Seq (5' to 3') CAACAAGUCCCAGUCUGCCACA

Total number of rows: 777

Table truncated, full table size 85 Kbytes.




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