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Status
Public on Jun 22, 2020
Title
[RM-RG01Aa520491] Rosetta/Merck Rat RSTA Custom Affymetrix 1.0 microarray (CDF: RM-RG01Aa520491_custom_MMPM.cdf)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Rattus norvegicus Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's website (www.affymetrix.com)
Support
glass
Description
Oligonucleotide array on glass.
Submission date
May 01, 2020
Last update date
Jun 22, 2020
Contact name
Alexei A Podtelezhnikov
Organization name
Merck & Co., Inc.
Department
Genetics and Pharmacogenomics
Lab
WP53B-120
Street address
770 Sumneytown Pike
City
West Point
State/province
PA
ZIP/Postal code
19486
Country
USA
Samples (241)
GSM4509858 , GSM4509859 , GSM4509860 , GSM4509861 , GSM4509862 , GSM4509863
GSM4509864 ,
GSM4509865 ,
GSM4509866 ,
GSM4509867 ,
GSM4509868 ,
GSM4509869 ,
GSM4509870 ,
GSM4509871 ,
GSM4509872 ,
GSM4509873 ,
GSM4509874 ,
GSM4509875 ,
GSM4509876 ,
GSM4509877 ,
GSM4509878 ,
GSM4509879 ,
GSM4509880 ,
GSM4509881 ,
GSM4509882 ,
GSM4509883 ,
GSM4509884 ,
GSM4509885 ,
GSM4509886 ,
GSM4509887 ,
GSM4509888 ,
GSM4509889 ,
GSM4509890 ,
GSM4509891 ,
GSM4509892 ,
GSM4509893 ,
GSM4509894 ,
GSM4509895 ,
GSM4509896 ,
GSM4509897 ,
GSM4509898 ,
GSM4509899 ,
GSM4509900 ,
GSM4509901 ,
GSM4509902 ,
GSM4509903 ,
GSM4509904 ,
GSM4509905 ,
GSM4509906 ,
GSM4509907 ,
GSM4509908 ,
GSM4509909 ,
GSM4509910 ,
GSM4509911 ,
GSM4509912 ,
GSM4509913 ,
GSM4509914 ,
GSM4509915 ,
GSM4509916 ,
GSM4509917 ,
GSM4509918 ,
GSM4509919 ,
GSM4509920 ,
GSM4509921 ,
GSM4509922 ,
GSM4509923 ,
GSM4509924 ,
GSM4509925 ,
GSM4509926 ,
GSM4509927 ,
GSM4509928 ,
GSM4509929 ,
GSM4509930 ,
GSM4509931 ,
GSM4509932 ,
GSM4509933 ,
GSM4509934 ,
GSM4509935 ,
GSM4509936 ,
GSM4509937 ,
GSM4509938 ,
GSM4509939 ,
GSM4509940 ,
GSM4509941 ,
GSM4509942 ,
GSM4509943 ,
GSM4509944 ,
GSM4509945 ,
GSM4509946 ,
GSM4509947 ,
GSM4509948 ,
GSM4509949 ,
GSM4509950 ,
GSM4509951 ,
GSM4509952 ,
GSM4509953 ,
GSM4509954 ,
GSM4509955 ,
GSM4509956 ,
GSM4509957 ,
GSM4509958 ,
GSM4509959 ,
GSM4509960 ,
GSM4509961 ,
GSM4509962 ,
GSM4509963 ,
GSM4509964 ,
GSM4509965 ,
GSM4509966 ,
GSM4509967 ,
GSM4509968 ,
GSM4509969 ,
GSM4509970 ,
GSM4509971 ,
GSM4509972 ,
GSM4509973 ,
GSM4509974 ,
GSM4509975 ,
GSM4509976 ,
GSM4509977 ,
GSM4509978 ,
GSM4509979 ,
GSM4509980 ,
GSM4509981 ,
GSM4509982 ,
GSM4509983 ,
GSM4509984 ,
GSM4509985 ,
GSM4509986 ,
GSM4509987 ,
GSM4509988 ,
GSM4509989 ,
GSM4509990 ,
GSM4509991 ,
GSM4509992 ,
GSM4509993 ,
GSM4509994 ,
GSM4509995 ,
GSM4509996 ,
GSM4509997 ,
GSM4509998 ,
GSM4509999 ,
GSM4510000 ,
GSM4510001 ,
GSM4510002 ,
GSM4510003 ,
GSM4510004 ,
GSM4510005 ,
GSM4510006 ,
GSM4510007 ,
GSM4510008 ,
GSM4510009 ,
GSM4510010 ,
GSM4510011 ,
GSM4510012 ,
GSM4510013 ,
GSM4510014 ,
GSM4510015 ,
GSM4510016 ,
GSM4510017 ,
GSM4510018 ,
GSM4510019 ,
GSM4510020 ,
GSM4510021 ,
GSM4510022 ,
GSM4510023 ,
GSM4510024 ,
GSM4510025 ,
GSM4510026 ,
GSM4510027 ,
GSM4510028 ,
GSM4510029 ,
GSM4510030 ,
GSM4510031 ,
GSM4510032 ,
GSM4510033 ,
GSM4510034 ,
GSM4510035 ,
GSM4510036 ,
GSM4510037 ,
GSM4510038 ,
GSM4510039 ,
GSM4510040 ,
GSM4510041 ,
GSM4510042 ,
GSM4510043 ,
GSM4510044 ,
GSM4510045 ,
GSM4510046 ,
GSM4510047 ,
GSM4510048 ,
GSM4510049 ,
GSM4510050 ,
GSM4510051 ,
GSM4510052 ,
GSM4510053 ,
GSM4510054 ,
GSM4510055 ,
GSM4510056 ,
GSM4510057 ,
GSM4510058 ,
GSM4510059 ,
GSM4510060 ,
GSM4510061 ,
GSM4510062 ,
GSM4510063 ,
GSM4510064 ,
GSM4510065 ,
GSM4510066 ,
GSM4510067 ,
GSM4510068 ,
GSM4510069 ,
GSM4510070 ,
GSM4510071 ,
GSM4510072 ,
GSM4510073 ,
GSM4510074 ,
GSM4510075 ,
GSM4510076 ,
GSM4510077 ,
GSM4510078 ,
GSM4510079 ,
GSM4510080 ,
GSM4510081 ,
GSM4510082 ,
GSM4510083 ,
GSM4510084 ,
GSM4510085 ,
GSM4510086 ,
GSM4510087 ,
GSM4510088 ,
GSM4510089 ,
GSM4510090 ,
GSM4510091 ,
GSM4510092 ,
GSM4510093 ,
GSM4510094 ,
GSM4510095 ,
GSM4510096 ,
GSM4510097 ,
GSM4510098 Series (1)
GSE149734 Application of a Rat Liver Drug Bioactivation Transcriptional Response Assay Early in Drug Development that informs Chemically Reactive Metabolite formation
Data table header descriptions ID Rosetta-generated unique probe identifier
SPOT_ID Transcript
Transcript Type Ensembl Transcript Ensembl Gene Gene Symbol Gene symbol for the gene represented
Gene Name Enrez ID Entrez Gene identifier for the gene represented
Data table ID SPOT_ID Transcript Type Ensembl Transcript Ensembl Gene Gene Symbol Gene Name Enrez ID 100064235_TGI_at
NM_019257
REFSEQ
ENSRNOT00000007583
ENSRNOG00000005513
Srsf5
serine and arginine rich splicing factor 5
29667 100046835_TGI_at
g11372963
INCYTE
100045370_TGI_at
NM_057186
REFSEQ
ENSRNOT00000014658
ENSRNOG00000010697
Hadh
hydroxyacyl-CoA dehydrogenase
113965 100055724_TGI_at
NM_001035238
REFSEQ
ENSRNOT00000076528
ENSRNOG00000000847
Csnk2b
casein kinase 2 beta
81650 100074026_TGI_at
ENSRNOT00000015474
ENSEMBL
ENSRNOT00000015474
ENSRNOG00000010819
Hspa4l
heat shock protein family A (Hsp70) member 4 like
294993 100058070_TGI_at
ENSRNOT00000026385
ENSEMBL
ENSRNOT00000026385
ENSRNOG00000019426
Ramac
RNA guanine-7 methyltransferase activating subunit
293058 100041605_TGI_at
ENSRNOT00000029019
ENSEMBL
ENSRNOT00000013159
ENSRNOG00000009920
LOC680121
similar to heat shock protein 8
680121 100059913_TGI_at
702155470F6
INCYTE
100045167_TGI_at
RNS00184123
CAT
100066686_TGI_at
NM_001014207
REFSEQ
ENSRNOT00000014605
ENSRNOG00000010921
Taf1d
"TATA-box binding protein associated factor, RNA polymerase I subunit D"
363017 100068210_TGI_at
g3248368
INCYTE
ENSRNOT00000083938
ENSRNOG00000059016
Tspan12
tetraspanin 12
362326 100058253_TGI_at
g11383613
INCYTE
100046185_TGI_at
NM_212497
REFSEQ
ENSRNOT00000000483
ENSRNOG00000000422
Dxo
decapping exoribonuclease
361799 100069236_TGI_at
g14960848
INCYTE
ENSRNOT00000067502
ENSRNOG00000009205
Lmo4
LIM domain only 4
362051 100043270_TGI_at
704152263J1
INCYTE
ENSRNOT00000084265
ENSRNOG00000058996
100057155_TGI_at
g3221811
INCYTE
100077886_TGI_at
ENSRNOT00000036852
ENSEMBL
ENSRNOT00000036852
ENSRNOG00000025501
Snx31
sorting nexin 31
366915 100059050_TGI_at
700517873H2
INCYTE
100059156_TGI_at
XM_001071507
REFSEQ
RGD1562771
similar to RIKEN cDNA 2310057N15
501767 100058037_TGI_at
ENSRNOT00000057433
ENSEMBL
ENSRNOT00000057433
ENSRNOG00000037814
Cxcl17
C-X-C motif chemokine ligand 17
308436
36991 3506 Kbytes .Supplementary file Size Download File type/resource GPL28473_RM-RG01Aa520491_custom_MMPM.cdf.gz
10.7 Mb
(ftp) (http) CDF
GPL28473_RM-RG01Aa520491_custom_MMPM.xlsx
2.7 Mb
(ftp) (http) XLSX
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