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Status
Public on Dec 31, 2005
Title
Acyrthosiphon pisum + Buchnera aphidicola dual genome array
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organisms
Buchnera aphidicola ; Acyrthosiphon pisum
Manufacturer
GATC - University of Arizona
Manufacture protocol
Genes were arranged in duplicate spots on slides, with Buchnera genes grouped into the first and second of 24 subarrays. In addition to spot duplication, the entire set was printed twice on each slide.
Description
Dual-genome microarray for the pea aphid, Acyrthosiphon pisum, and its obligate bacterial symbiont, Buchnera aphidicola The platform table is condensed to show each GENE on the array. The full array table, showing all spots, is linked as a supplementary file (see download link below).
Contributor(s)
Moran NA , Stern DL , Wilson AC , Dunbar HE , Davis GK , Hunter WB
Submission date
Sep 26, 2005
Last update date
Dec 31, 2005
Contact name
Nancy A Moran
E-mail(s)
nmoran@u.arizona.edu
Organization name
University of Arizona
Department
Ecology and Evolutionary Biology
Lab
Moran Lab
Street address
Biosciences West, Room 310, 1041 E. Lowell St., The University of Arizona
City
Tucson
State/province
AZ
ZIP/Postal code
85721-0088
Country
USA
Samples (1)
GSM86111
Series (1)
GSE3742
A dual-genome microarray for the pea aphid, and its obligate bacterial symbiont
Data table header descriptions
ID
Genbank accession or gene name; B_ = Buchnera genes
GB_ACC
Genbank accession
SPOT_ID
gene name; B_ = Buchnera genes
Data table
ID
GB_ACC
SPOT_ID
B_pheA
B_pheA
hsp-70
hsp-70
B_ibpA
B_ibpA
CN586725
CN586725
B_yjeA
B_yjeA
wnt2
wnt2
B_dnaK
B_dnaK
Distaless
Distaless
B_lysA
B_lysA
CN584139
CN584139
wingless
wingless
CN582666
CN582666
nanos
nanos
vasa-like
vasa-like
CN587624
CN587624
B_cysS
B_cysS
CN585002
CN585002
B_mopA
B_mopA
CN586568
CN586568
CN585958
CN585958
Total number of rows: 1904 Table truncated, full table size 34 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL2889_full_array.txt.gz
333.6 Kb
(ftp) (http)
TXT