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Platform GPL2889 Query DataSets for GPL2889
Status Public on Dec 31, 2005
Title Acyrthosiphon pisum + Buchnera aphidicola dual genome array
Technology type spotted DNA/cDNA
Distribution non-commercial
Organisms Buchnera aphidicola; Acyrthosiphon pisum
Manufacturer GATC - University of Arizona
Manufacture protocol Genes were arranged in duplicate spots on slides, with Buchnera genes grouped into the first and second of 24 subarrays. In addition to spot duplication, the entire set was printed twice on each slide.
 
Description Dual-genome microarray for the pea aphid, Acyrthosiphon pisum, and its obligate bacterial symbiont, Buchnera aphidicola

The platform table is condensed to show each GENE on the array. The full array table, showing all spots, is linked as a supplementary file (see download link below).
 
Contributor(s) Moran NA, Stern DL, Wilson AC, Dunbar HE, Davis GK, Hunter WB
Submission date Sep 26, 2005
Last update date Dec 31, 2005
Contact name Nancy A Moran
E-mail(s) nmoran@u.arizona.edu
Organization name University of Arizona
Department Ecology and Evolutionary Biology
Lab Moran Lab
Street address Biosciences West, Room 310, 1041 E. Lowell St., The University of Arizona
City Tucson
State/province AZ
ZIP/Postal code 85721-0088
Country USA
 
Samples (1) GSM86111
Series (1)
GSE3742 A dual-genome microarray for the pea aphid, and its obligate bacterial symbiont

Data table header descriptions
ID Genbank accession or gene name; B_ = Buchnera genes
GB_ACC Genbank accession
SPOT_ID gene name; B_ = Buchnera genes

Data table
ID GB_ACC SPOT_ID
B_pheA B_pheA
hsp-70 hsp-70
B_ibpA B_ibpA
CN586725 CN586725
B_yjeA B_yjeA
wnt2 wnt2
B_dnaK B_dnaK
Distaless Distaless
B_lysA B_lysA
CN584139 CN584139
wingless wingless
CN582666 CN582666
nanos nanos
vasa-like vasa-like
CN587624 CN587624
B_cysS B_cysS
CN585002 CN585002
B_mopA B_mopA
CN586568 CN586568
CN585958 CN585958

Total number of rows: 1904

Table truncated, full table size 34 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL2889_full_array.txt.gz 333.6 Kb (ftp)(http) TXT

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