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Platform GPL29703 Query DataSets for GPL29703
Status Public on Feb 08, 2021
Title Sino Human 4x180K CeRNA Array v3 (Agilent-085477)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent
Manufacture protocol Agilent
 
Description Design ID 085477
 
Submission date Feb 07, 2021
Last update date Feb 08, 2021
Contact name xiaoxiao sun
E-mail(s) xiaoxiao.sun@sinotechgenomics.com
Phone 19901640496
Organization name sinomics
Street address kangxinroad3399
City shanghai
ZIP/Postal code 210000
Country China
 
Samples (35) GSM5075653, GSM5075654, GSM5075655, GSM5075656, GSM5075657, GSM5075658 
Series (5)
GSE166552 A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
GSE181988 circRNA expression profile of HBV-positive liver cancer cells
GSE183021 Genome-wide analysis of circular RNAs in cerebral palsy

Data table header descriptions
ID
Type type of gene
SEQUENCE the sequence of Probe
SPOT_ID
Ensembl_ID Ensembl_ID in Ensembl
Chromosome the Chromosome of gene
Strand Strand
Start_hg19
End_hg19
Start_hg38
End_hg38
GeneSymbol GeneSymbol
Description

Data table
ID Type SEQUENCE SPOT_ID Ensembl_ID Chromosome Strand Start_hg19 End_hg19 Start_hg38 End_hg38 GeneSymbol Description
EX_04_0776192 ncRNA CCTGGATTGTCCTAGAACTTTGTTCCAACAGATTACATGTGTTCATAACGAATAAATTGC NR_024321.1 -- chr1 - 761586 762902 826206 827522 LINC00115 long intergenic non-protein coding RNA 115
EX_78_6127084 ncRNA TGTCCTGCTCTCATACGAACTTGTGTCTAAAACTGTGGTCTTTGCTTTTCTCCCAAACCC NR_038869.1 -- chr1 + 1072397 1079436 1137017 1144056 LINC01342 long intergenic non-protein coding RNA 1342
EX_60_4894008 misc_RNA TTCTCTGTGCTTCACGTGGTCGGGTCCCTGTTCTCACTCCACAGCGGACGAGGTGCCACT XR_132470.6 -- chr1 - 1108435 1115028 1173055 1179648 TTLL10-AS1 TTLL10 antisense RNA 1%2C transcript variant X2
EX_47_6665978 precursor_RNA GGGGCGGGAGCTGGGGTCTGCAGGTTCGCACTGATGCCTGCTCGCCCTGTCTCCCGCTAG NR_106784.1 -- chr1 - 1231490 1231550 1296110 1296170 MIR6726 microRNA 6726
EX_37_4828898 precursor_RNA CTCGGGGCAGGCGGCTGGGAGCGGCCCTCACATTGATGGCTCCTGCCACCTCCTCCGCAG NR_106785.1 -- chr1 - 1247882 1247946 1312502 1312566 MIR6727 microRNA 6727
EX_52_3263542 ncRNA TTCTGCTGGACTCGACCCAGCCACACACCAGGCTGTGCTCAAGGCCACGGAATGAGCCTT NR_125996.1 -- chr1 - 1365537 1369953 1430157 1434573 LOC102724312 uncharacterized LOC102724312%2C transcript variant 3
EX_34_2016184 misc_RNA ACACGTGTTCGCTTATTTAAGAAACTACAAGATCTTAAGGCCGAGGACGTCCCAGTGATC XR_001737391.1 -- chr1 - 1599846 1608250 1668407 1676811 SLC35E2B solute carrier family 35 member E2B%2C transcript variant X2
EX_71_8633359 ncRNA CTGAAACATGTGATGAGGGCAACTTTGTGTGCAAAACTCAGAGAGCAGTTACTCAAAAAA XR_001737839.1 -- chr1 + 1623982 1630641 1692543 1699202 LOC107985731 uncharacterized LOC107985731
EX_32_1011845 ncRNA TTGAAATGGATCAGCAACAACAGATATAGCAGTTGATGGACCAAGCAAAGGTGTCCGAGG XR_001737842.1 -- chr1 + 1887296 1890207 1955857 1958768 LOC107984872 uncharacterized LOC107984872%2C transcript variant X2
EX_57_8352828 ncRNA ATTTATAAAATGCCGTGATTCAGGTCTCAGGGCACTGTCGCCCCTACTCACTTTGATGAA XR_001737843.1 -- chr1 - 1944650 1948037 2013211 2016598 LOC105378589 uncharacterized LOC105378589%2C transcript variant X1
EX_60_8824115 misc_RNA TGGGACTTGGTGTTTCATACAAAGAATACAAGTAACTGATGAATGAAGGGGGCATCTTGT XR_001737315.1 -- chr1 + 2076796 2116555 2145357 2185116 PRKCZ protein kinase C zeta%2C transcript variant X26
EX_48_6747393 misc_RNA GGTTCAGGCCTCCTTTATGATACATGCCACAAACACAATATCTTTGTATTAAAAGGATTT NR_125361.1 -- chr1 - 2306292 2323190 2374853 2391751 MORN1 MORN repeat containing 1%2C transcript variant 3
EX_96_2283423 precursor_RNA ACGTCCTCCAGCTTTTTTCCTTAGTGGCCAATTCCTGAGAAAAGGGCCAACGTGCTTCCA NR_036215.1 -- chr1 + 3044539 3044599 3127975 3128035 MIR4251 microRNA 4251
EX_32_4236688 ncRNA GCAGAGGGGACTTTCTTTAAATAGAGCATTCTGATTCACAAGCGAAAAAGGAAATAAATA XR_001737869.1 -- chr1 + 3108509 3112083 3191945 3195519 LOC107984909 uncharacterized LOC107984909
EX_21_5521225 ncRNA TATGAAGGATCAAGCATTCATCACAAACACAGGCAGGCGAAGGAGACCAAAACACAGCTA XR_946873.2 -- chr1 - 3223200 3244538 3306636 3327974 LOC105378604 uncharacterized LOC105378604%2C transcript variant X1
EX_09_2865461 precursor_RNA TGGGGCCAGTCTGACCGTTTCTAGGCGACCCACTCTTGGTTTCCAGGGTTGCCCTGGAAA NR_030277.1 -- chr1 - 3477259 3477354 3560695 3560790 MIR551A microRNA 551a
EX_86_6749270 ncRNA ACCATGAGACTGATAGCTGCACCACGAGGCAGCCTTTATGCCCAGACGTTTCCTCCCTCA XR_946889.2 -- chr1 - 3574994 3581977 3658430 3665413 LOC105378610 uncharacterized LOC105378610%2C transcript variant X2
EX_72_3991887 ncRNA ACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAACTGG NR_033710.1 -- chr1 - 3652548 3663937 3735984 3747373 TP73-AS1 TP73 antisense RNA 1%2C transcript variant 2
EX_97_2166868 ncRNA ACAGCTCGAGAAGCTGAAAGCAAGATACAACAGACAGTTCCACTCAATTTGCTGCCTTCA XR_946907.1 -- chr1 - 5550902 5552864 5490842 5492804 LOC105376686 uncharacterized LOC105376686%2C transcript variant X1
EX_32_7671143 precursor_RNA TGGGCTTCCCGGAGGGCGGAACACCCAGCCCCAGCATCCAGGGCTCACCTACCACGTTTG NR_039612.1 -- chr1 + 5624131 5624203 5564071 5564143 MIR4417 microRNA 4417

Total number of rows: 154544

Table truncated, full table size 23932 Kbytes.




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