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| Status |
Public on Jan 20, 2023 |
| Title |
[Celegans] Affymetrix C. elegans Genome Array [CDF: Celegans_Ce_ENSG version 21] |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Caenorhabditis elegans |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
see manufacturer's web site
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| Description |
This is identical to GPL200 but a custom CDF environment was used to extract data [Brainarray Version 21, Celegans_Ce_ENSG]. CDF can be downloaded from the Brainarray website: http://mbni.org/customcdf/21.0.0/ensg.download/Celegans_Ce_ENSG_21.0.0.zip
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| Submission date |
Mar 30, 2022 |
| Last update date |
Jan 22, 2023 |
| Contact name |
Popi Syntichaki |
| E-mail(s) |
synticha@bioacademy.gr
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| Organization name |
Biomedical Research Foundation of the Academy of Athens
|
| Department |
Center of Basic Research
|
| Street address |
Soranou tou Efessiou 4
|
| City |
Athens |
| State/province |
Papagou |
| ZIP/Postal code |
11527 |
| Country |
Greece |
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| Samples (6) |
GSM5987572, GSM5987573, GSM5987574, GSM5987575, GSM5987576, GSM5987577 |
| Series (1) |
| GSE199807 |
Expression data from mid-aged decapping mutant C. elegans nematodes |
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| Relations |
| Alternative to |
GPL200 (Alternative CDF [official]) |
| Data table header descriptions |
| ID |
|
| ORF |
Gene Symbol WBcel235 assembly |
| DESCRIPTION |
|
| SPOT_ID |
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| Data table |
| ID |
ORF |
DESCRIPTION |
SPOT_ID |
| WBGene00000001_at |
aap-1 |
phosphoinositide kinase AdAPter subunit [Source:RefSeq peptide;Acc:NP_491522] |
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| WBGene00000002_at |
aat-1 |
Amino Acid Transporter |
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| WBGene00000003_at |
aat-2 |
Amino Acid Transporter |
|
| WBGene00000004_at |
aat-3 |
Amino Acid Transporter |
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| WBGene00000005_at |
aat-4 |
Amino Acid Transporter |
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| WBGene00000006_at |
aat-5 |
Amino Acid Transporter |
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| WBGene00000007_at |
aat-6 |
Amino Acid Transporter |
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| WBGene00000008_at |
aat-7 |
Amino Acid Transporter |
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| WBGene00000009_at |
aat-8 |
Amino Acid Transporter |
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| WBGene00000010_at |
aat-9 |
Amino Acid Transporter |
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| WBGene00000012_at |
abf-1 |
Antibacterial factor-related peptide 1 |
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| WBGene00000013_at |
abf-2 |
Antibacterial factor-related peptide 2 |
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| WBGene00000014_at |
abf-3 |
AntiBacterial Factor related [Source:RefSeq peptide;Acc:NP_506950] |
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| WBGene00000015_at |
abf-4 |
AntiBacterial Factor related [Source:RefSeq peptide;Acc:NP_507965] |
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| WBGene00000016_at |
abf-5 |
AntiBacterial Factor related [Source:RefSeq peptide;Acc:NP_510136] |
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| WBGene00000018_at |
abl-1 |
Tyrosine-protein kinase abl-1 [Source:UniProtKB/Swiss-Prot;Acc:P03949] |
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| WBGene00000019_at |
abt-1 |
ABC Transporter family |
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| WBGene00000020_at |
abt-2 |
ABC Transporter family |
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| WBGene00000021_at |
abt-3 |
NA |
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| WBGene00000022_at |
abt-4 |
ABC Transporter family |
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Total number of rows: 17397
Table truncated, full table size 1084 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL32098_Celegans_Ce_ENSG.cdf.gz |
5.1 Mb |
(ftp)(http) |
CDF |
| GPL32098_Celegans_Ce_ENSG_desc_annotation.txt.gz |
227.7 Kb |
(ftp)(http) |
TXT |
| GPL32098_Celegans_Ce_ENSG_mapping.txt.gz |
1.6 Mb |
(ftp)(http) |
TXT |
| GPL32098_Celegans_Ce_ENSG_probe.tab.gz |
2.7 Mb |
(ftp)(http) |
TAB |
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