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Platform GPL32643 Query DataSets for GPL32643
Status Public on Oct 10, 2022
Title Nanostring nCounter Human Immunology V2 with panel plus
Technology type other
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Nanostring
Manufacture protocol https://nanostring.com/wp-content/uploads/TN_Using_nCounter_with_FFPE_Samples.pdf
 
Description Molecular barcoding and digital quantification of target RNA or DNA sequences
 
Submission date Sep 08, 2022
Last update date Oct 10, 2022
Contact name Pauline Gravelle
E-mail(s) pauline.gravelle@inserm.fr
Organization name IUCT-ONCOPOLE
Department Anatomy-Pathology
Street address 1 Avenue Irène Joliot Curie
City TOULOUSE
ZIP/Postal code 31059
Country France
 
Samples (66) GSM6560831, GSM6560832, GSM6560833, GSM6560834, GSM6560835, GSM6560836 
Series (1)
GSE212902 Histological subtypes drive distinct prognostic immune signatures in classical Hodgkin lymphoma.

Data table header descriptions
ID gene ID
Official Full GN Official Full Gene Name
GB_ACC Official RefSeq Accession number
ORF Official Gene Symbol
SEQUENCE Target Sequence
SPOT_ID

Data table
ID Official Full GN GB_ACC ORF SEQUENCE SPOT_ID
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 NM_000927.3 ABCB1 TATAGCACTAAAGTAGGAGACAAAGGAACTCAGCTCTCTGGTGGCCAGAAACAACGCATTGCCATAGCTCGTGCCCTTGTTAGACAGCCTCATATTTTGC
ABL1 c-abl oncogene 1, non-receptor tyrosine kinase NM_005157.3 ABL1 CTGCGTGAGCTATGTGGATTCCATCCAGCAAATGAGGAACAAGTTTGCCTTCCGAGAGGCCATCAACAAACTGGAGAATAATCTCCGGGAGCTTCAGATC
ADA adenosine deaminase NM_000022.2 ADA TCCAAGAAGACCATGATCTCAATAGTCAGTTACTGATGCTCCTGAACCCTATGTGTCCATTTCTGCACACACGTATACCTCGGCATGGCCGCGTCACTTC
AHR aryl hydrocarbon receptor NM_001621.3 AHR CTGCTACCACATCCACTCTAAGCAAGGACTCTCTCAATCCTAGTTCCCTCCTGGCTGCCATGATGCAACAAGATGAGTCTATTTATCTCTATCCTGCTTC
AICDA activation-induced cytidine deaminase NM_020661.1 AICDA GCTGCATGAAAATTCAGTTCGTCTCTCCAGACAGCTTCGGCGCATCCTTTTGCCCCTGTATGAGGTTGATGACTTACGAGACGCATTTCGTACTTTGGGA
AIRE autoimmune regulator NM_000383.2 AIRE CAGCGCCACCTCTTGTCAGTGCTCGGCTGTAAACAGCTCTGTGTTTCTGGGGACACCAGCCATCATGTGCCTGGAAATTAAACCCTGCCCCACTTCTCTA
APP amyloid beta (A4) precursor protein NM_000484.3 APP TAAAGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGTTATGACACACCTCCGTGTGATTTATGAGCGCATGAA
ARG1 arginase, liver NM_000045.2 ARG1 AAGGAACTAAAAGGAAAGATTCCCGATGTGCCAGGATTCTCCTGGGTGACTCCCTGTATATCTGCCAAGGATATTGTGTATATTGGCTTGAGAGACGTGG
ARG2 arginase, type II NM_001172.3 ARG2 ATCAGAAAATCAAGCACGTGTGAGAATTTAGGAGACACTGTGCACTGACATGTTTCACAACAGGCATTCCAGAATTATGAGGCATTGAGGGGATAGATGA
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta NM_001175.4 ARHGDIB ATGCATCTTTTCCCACCCTGTCACTCAACGTGGTCCCTAGAACAAGAGGCTTAAAACCGGGCTTTCACCCAACCTGCTCCCTCTGATCCTCCATCAGGGC
ATG10 ATG10 autophagy related 10 homolog (S. cerevisiae) NM_001131028.1 ATG10 TCAACTATATCACATCATGGCTGAGCATTGTAGGGCCAGTTGTTGGGCTGAATCTACCTCTGAGTTATGCCAAAGCAACGTCTCAGGATGAACGAAATGT
ATG12 ATG12 autophagy related 12 homolog (S. cerevisiae) NM_004707.2 ATG12 CCGCTCCTCTCCCGAGGTCTGTAGTCGCGGAGAAACACATGTTGCGTTACTAACGTTCAGAGGTCTGCGACAGCTTCGATTTGAATGACTAGCCGGGAAC
ATG16L1 ATG16 autophagy related 16-like 1 (S. cerevisiae) NM_198890.2 ATG16L1 CCTTCCAAAGTCGGTTCTGGCCTAACGCATGTCCCAACACCTTGGGTTCATTTGCCCGGTGAACTCACTTTAAGCATTGGATTAACGGAAACTCCCGAAC
ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) NM_004849.2 ATG5 TGCAGTGGCTGAGTGAACATCTGAGCTACCCGGATAATTTTCTTCATATTAGTATCATCCCACAGCCAACAGATTGAAGGATCAACTATTTGCCTGAACA
ATG7 ATG7 autophagy related 7 homolog (S. cerevisiae) NM_001136031.2 ATG7 TATGATCCCTGTAACTTAGCCCAGTACCCTGGATGGCCTTTGAGGAATTTTTTGGTCCTAGCAGCCCACAGATGGAGTAGCAGTTTCCAGTCTGTTGAAG
ATM ataxia telangiectasia mutated NM_000051.3 ATM ACGCTAAGTCGCTGGCCATTGGTGGACATGGCGCAGGCGCGTTTGCTCCGACGGGCCGAATGTTTTGGGGCAGTGTTTTGAGCGCGGAGACCGCGTGATA
B2M beta-2-microglobulin NM_004048.2 B2M TACTGAAGAATGGAGAGAGAATTGAAAAAGTGGAGCATTCAGACTTGTCTTTCAGCAAGGACTGGTCTTTCTATCTCTTGTACTACACTGAATTCACCCC
B3GAT1 beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) NM_018644.3 B3GAT1 GAGGGAGGCCTGAGCACACTGCTTTGGAAATTATTCTAAACACAAAAAAGGGAAAGAAAATGTTATTTCTCCCTAAGTCAGGAGCATGCAGAGCTAGCCC
BATF basic leucine zipper transcription factor, ATF-like NM_006399.3 BATF CCTGGCAAACAGGACTCATCTGATGATGTGAGAAGAGTTCAGAGGAGGGAGAAAAATCGTATTGCCGCCCAGAAGAGCCGACAGAGGCAGACACAGAAGG
BATF3 basic leucine zipper transcription factor, ATF-like 3 NM_018664.2 BATF3 ACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATCCACCCTGGCAGCTAGTAGGTTC

Total number of rows: 586

Table truncated, full table size 95 Kbytes.




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