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Platform GPL3388 Query DataSets for GPL3388
Status Public on Jan 30, 2006
Title Chromosome coordinates of yeast oligo microarray (Agilent G4140A)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer Agilent
Manufacture protocol see manufacturer's website
Catalog number G4140A
 
Description this submission gives chromosome coordinate information for the oligos on Agilent's Yeast Oligo Microarray (G4140A).
 
Submission date Jan 24, 2006
Last update date Jan 30, 2006
Contact name Bonita J Brewer
E-mail(s) bbrewer@gs.washington.edu
Phone (206) 685-2870
Fax (206) 543-0754
Organization name University of Washington
Department Genome Sciences
Lab Brewer/Raghuraman
Street address Box 357730
City Seattle
State/province WA
ZIP/Postal code 98195
Country USA
 
Samples (8) GSM93696, GSM93697, GSM93698, GSM93699, GSM93700, GSM93701 
Series (1)
GSE4099 Single stranded DNA formation during S phase in the presence of hydroxyurea in S. cerevisiae and S. pombe

Data table header descriptions
ID chr_coordinate (kb)
Probe_ID
Chromosome yeast chromosome
Coordinate MID (bp)
Coordinate (kb)
Strand Watson (W) or Crick (C)
ORF yeast orf name
SEQUENCE probe sequence

Data table
ID Probe_ID Chromosome Coordinate MID (bp) Coordinate (kb) Strand ORF SEQUENCE
1_147.705 A_06_P1024 I 147705 147.705 C YAL001C TCCAGGGATAACATTGAGTAGATTGCAATCTAGGTGTCGTGAAGTACTTTCGCTTCATGA
1_147.471 A_06_P1025 I 147471 147.471 W YAL002W CAGAAACCCGATGAATATTCTTGTTTAATTTGCCAGACGGAATCTAACCCAAAAATAGTA
1_143.004 A_06_P1026 I 143004 143.004 W YAL003W TGCTCACCAATTTATCCCAATTGGTTTCGGTATCAAGAAGTTGCAAATTAACTGTGTTGT
1_141.211 A_06_P1027 I 141211 141.211 W YAL004W TTTCTACCGATCAAACGCTTAGCGTCGAAAACGGTATTCGAAGGATTCATAGCAGCTTGA
1_140.139 A_06_P1028 I 140139 140.139 C YAL005C AGAAACTCTACCATTTCAACAAAGAAGTTCGAGATCTTTTCCACTTATGCTGATAACCAA
1_137.852 A_06_P1029 I 137852 137.852 C YAL007C GGAGGAAATAGATAGAAACTTGAACAAAATCACGAAGACTTTGAACTATTTGAGAGCCAG
1_137.406 A_06_P1030 I 137406 137.406 W YAL008W GACTTGAAGAAACTGCTTATTGATGGGTTATTGGGTACAGAATACATGGGTTTTAAAGTA
1_136.41 A_06_P1031 I 136410 136.41 W YAL009W AATTTCTGTGGCTTAAAGACGATAATGCCATTGTGAAATTTTGGAAAAGTGTCACGATAC
1_134.384 A_06_P1032 I 134384 134.384 C YAL010C GTTCCATTTTTACCAGTGTTTGGAAATTAAGCACGTCATTACGTGACAAGACTTTAAAAC
1_133.841 A_06_P1033 I 133841 133.841 W YAL011W ATGACAATGAAGTTATCGGGGATTCACAAAAGATTTAACCAAATCATCCGAAATAGCGTT
1_131.888 A_06_P1034 I 131888 131.888 W YAL012W TGGTGTTTTTGACGACTTGGTTAGAATCTCTGTCGGTATTGAAGACACTGACGATCTTTT
1_130.16 A_06_P1035 I 130160 130.16 W YAL013W GATATAGTCATCCCAGATGTCAATTACCACGTCCCCATCAAACTTGATAACAAGACGCTG
1_127.036 A_06_P1037 I 127036 127.036 C YAL015C GGGATTTGCAGTCTCAATTGTACAAGGAAATCCAGCAAAATATCATGAGTTATCCAAAGT
1_126.584 A_06_P1038 I 126584 126.584 W YAL016W CGGTGTTCCAAATATTAGGTTTAATGTGGCCAAATCCTACGCTGTGATAGTGAAGGTTTT
1_124.114 A_06_P1039 I 124114 124.114 W YAL017W GGTGGTCTTCAAAGAAAACCCCTTCTACAATATAGATGAAATATTAGAAGGCGACCTGAA
1_118.656 A_06_P1040 I 118656 118.656 C YAL018C CCCATTTTAGCGGGCTTTGCCATTTCTACAAATACTATTGGTAGCGTTTTATTTAACCTT
1_118.148 A_06_P1041 I 118148 118.148 W YAL019W GGATTCCATAGAGGAAAAGATTCATCAACTGGCCAAAAATAAACTAGCTTTAGATTCGTA
1_113.735 A_06_P1042 I 113735 113.735 C YAL020C TAACTACTGCTAATCAAGAAGGCAAGTCTCACTGTTACAATGTATACTGCTGGGGCTGGG
1_110.988 A_06_P1043 I 110988 110.988 C YAL021C CACCGTCATTCACAGATGTTATCGACTATATATGGTTTTCTACACATGCTCTAAGGGTGC
1_108.879 A_06_P1044 I 108879 108.879 C YAL022C GCTCTGGGCAGCATCATAAGCTACGTATTCGTCTTCATAATTGACTTTATTATCAGGTAG

Total number of rows: 6192

Table truncated, full table size 668 Kbytes.




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Supplementary data files not provided
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