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Status
Public on Feb 27, 2007
Title
NIA Mouse 15K cDNA array_Hepatotoxicity
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Mus musculus
Manufacturer
University Health Network
Manufacture protocol
The mouse 15k bacterial clone sets from NIA were PCR amplified and purified before spotting on CMT-GAP II slides (Corning). Post Printing Quality Control tests include a real hybridization using commercially available mouse RNA, vector probe labeling and terminal transferase tailing method to assess spot morphology, background quality and intensity of signal. More information is available on http://www.microarrays.ca Duplicate adjacent spots on the array.
Catalog number
None
Support
glass
Coating
aminosilane
Web link
http://www.microarrays.ca
Contributor(s)
Rath SK , Noel S
Submission date
Feb 27, 2006
Last update date
Jan 18, 2013
Contact name
Sanjeev Noel
E-mail(s)
sanjeevnoel@gmail.com
Phone
91-9935392997
Organization name
Central Drug Research Institute
Department
Toxicology
Lab
Genotoxicity
Street address
M G Marg
City
Lucknow
State/province
Uttar Pradesh
ZIP/Postal code
226001
Country
India
Samples (17)
GSM99080 , GSM106990 , GSM109587 , GSM109588 , GSM109589 , GSM109591
GSM110382 ,
GSM110383 ,
GSM110384 ,
GSM110385 ,
GSM110386 ,
GSM110387 ,
GSM138589 ,
GSM138590 ,
GSM138591 ,
GSM138592 ,
GSM138593
Series (2)
GSE4874
Carbon tetrachloride and Acetaminophen hepatotoxicity study
GSE5979
Differential gene expression in mice liver following primaquine administration
Data table header descriptions
ID
CLONE_ID
Clone ID from National Institute of Aging
UGCluster
Unigene Cluster ID
Name
Gene Name
Symbol
Gene Symbol
LLID
Locus Link ID
UGRepAcc
Unigene Representative Protein Accession
LLRepProtAcc
Entrez Gene Representative Protein Accession
Chromosome
Chromosome Number
Cytoband
Chromosomal Location
Data table
ID
CLONE_ID
UGCluster
Name
Symbol
LLID
UGRepAcc
LLRepProtAcc
Chromosome
Cytoband
1
H3007F01
Mm.203
"Apurinic/apyrimidinic endonuclease 1 (Apex1), mRNA"
Apex1
11792
AK144251
NP_033817
14
2
H3007D07
Mm.103522
"PWP2 (periodic tryptophan protein) homolog, yeast, mRNA (cDNA clone IMAGE:3991539)"
Pwp2h
110816
AK088983
NP_083822
10
3
H3007D01
Mm.5068
"SH3 domain protein 4, mRNA (cDNA clone MGC:31726 IMAGE:4920799)"
Sh3d4
20410
AB190911
NP_035496
14
4
H3007B07
Mm.23987
"Toll-interleukin 1 receptor (TIR) domain-containing adaptor protein (Tirap), mRNA"
Tirap
117149
AK081514
NP_473437
9
9 A5.3
5
H3007B01
Mm.23837
"Leucine rich repeat containing 5, mRNA (cDNA clone MGC:47330 IMAGE:4239389)"
Lrrc5
231549
AK170452
NP_848816
5
5 E5
6
H3003H07
Data not found
7
H3003H01
Mm.288206
"Adenylate cyclase 7 (Adcy7), mRNA"
Adcy7
11513
AK138911
NP_031432
8
8
H3003F07
Mm.285993
"Calmodulin 1 (Calm1), mRNA"
Calm1
12313
BC054805
NP_033920
12
9
H3003F01
Data not found
10
H3003D07
In multiple clusters
11
H3003D01
Data not found
12
H3003B07
Mm.27443
"Methyl-CpG binding domain protein 6 (Mbd6), mRNA"
D10Wsu93e
110962
NM_033072
NP_149063
10
13
H3003B01
Mm.273418
"Melanoma associated antigen (mutated) 1, mRNA (cDNA clone IMAGE:5369109)"
Mum1
68114
AK147490
NP_075920
10
10 C1
14
H3015B07
Mm.46029
"G patch domain containing 4, mRNA (cDNA clone MGC:28443 IMAGE:4039649)"
Gpatc4
66614
BC080676
NP_079939
3
3 F1
15
H3015B01
Mm.4325
"Kruppel-like factor 4 (gut), mRNA (cDNA clone MGC:11479 IMAGE:3156339)"
Klf4
16600
AK155343
NP_034767
4
16
H3011H07
Mm.379341
"Archain 1, mRNA (cDNA clone MGC:36506 IMAGE:5368060)"
Arcn1
213827
AK028556
NP_666097
9
9 A5.2
17
H3011H01
Mm.321828
"Luc7 homolog (S. cerevisiae)-like, mRNA (cDNA clone MGC:32167 IMAGE:5003664)"
Luc7l
66978
AK133196
NP_082466
17
18
H3011F07
Mm.193688
"Protein tyrosine phosphatase 4a2 (Ptp4a2), mRNA"
Ptp4a2
19244
AK155895
NP_033000
4
4 D2.3
19
H3011F01
Mm.248353
"Host cell factor C1 (Hcfc1), mRNA"
Hcfc1
15161
BC053742
NP_032250
X
20
H3011D07
Mm.28688
"Seryl-aminoacyl-tRNA synthetase 1, mRNA (cDNA clone MGC:7162 IMAGE:3257101)"
Sars1
20226
AK028358
NP_035449
3
Total number of rows: 15247 Table truncated, full table size 1570 Kbytes .
Supplementary file
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File type/resource
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