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Platform GPL3572 Query DataSets for GPL3572
Status Public on Jun 20, 2009
Title NHGRI_HS_Exp_Tile_1
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen System, Inc.
Manufacture protocol See manufacture's website
 
Description Human 17q/20q 60 mer Expression Tiling Array 1
UCSC HG16
 
Contributor(s) Meltzer P, Chen Y, Jiang Y, Wolfsberg T, Pearson J
Submission date Mar 21, 2006
Last update date Jun 20, 2009
Contact name Christopher Pan
E-mail(s) cpan@mail.nih.gov
Organization name NIH
Department NHGRI
Street address Rm 5228, Bldg 50, South Dr.
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 

Data table header descriptions
ID
PROBE_ID Probe ID
CHROMOSOME Chromosome
X X
Y Y
SEQUENCE Probe sequence
STARTING_BP Genomic start position

Data table
ID PROBE_ID CHROMOSOME X Y SEQUENCE STARTING_BP
1 CHR17R051997491 17 1 1 TTTTTTGCATACCTCTCCTGATTATTTGATCTTTTTTTCTAATATTAAAT 51997491
2 CPK6 n/a 4 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
3 CPK6 n/a 6 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
4 CPK6 n/a 8 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
5 CPK6 n/a 10 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
6 CPK6 n/a 12 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
7 CPK6 n/a 14 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
8 CPK6 n/a 16 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
9 CPK6 n/a 18 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
10 CPK6 n/a 20 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
11 CPK6 n/a 22 1 TGAGTTGTTTGATAGGATTATTCATAGAGGTCATTACAGCGAGAGGAANNNNNNNNN 0
12 CHR17R041714871 17 25 1 ACTGGTTTTCTGGCAAAAACAATGTTTCTTCTGAAGTAGGCATTGAGACT 41714871
13 CHR17P050226759 17 27 1 CCGTGGACTCAGGATTGAAGTCAGTTAAAAAGATTAATACCATTTAATAC 50226759
14 CHR17R038862127 17 29 1 AGGAGAAACTGAGGCAGCACCTGCCTGCCCCCTGGCCCCAGGGCATAAAG 38862127
15 CHR17R039220106 17 31 1 CACAGCCACTGCAGAGGTTTACAAGAACCTGGAGAAACTTACAAGTTTGC 39220106
16 CHR17R044520773 17 33 1 TGTCGGATGGAATGGAGGTGAGGTCCCTGGGTGCTGTGGAGGGTTGTGGG 44520773
17 CHR17R048185320 17 35 1 AGTCGGAGCATTCTGTTGTTATCCTATTGGGTTTAGTGACTTGAGAGTCA 48185320
18 CHR17R038476028 17 37 1 AAGGAGGGAGGGGTGGGATGGGCTTGGGGGCAGGGGTGAAGCTGCACAGG 38476028
19 CHR17R042955322 17 39 1 ACTGTAGTACTGAATGCCCAGAAACTGCCACAAAACCAAAGCAAATGCTT 42955322
20 CHR17R037316108 17 41 1 GAGGTTTTTCCTTGTAGCATTCAGGCTGATTTCACCTCACAGCAGATGTT 37316108

Total number of rows: 390619

Table truncated, full table size 35612 Kbytes.




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Supplementary data files not provided

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