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Platform GPL3780 Query DataSets for GPL3780
Status Public on May 25, 2006
Title Spectral_Genomics_Human_BAC_array
Technology type spotted DNA/cDNA
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Spectral Genomics
Manufacture protocol http://www.spectralgenomics.com/
 
 
Web link http://www.spectralgenomics.com/
Contributor(s) Squire JA, Lee C
Submission date May 17, 2006
Last update date May 25, 2006
Contact name Chung-Hae Lee
E-mail(s) clee@uhnres.utoronto.ca
Phone 416 946- 4501
Fax 416- 946 - 2065
URL http://www.utoronto.ca/cancyto/
Organization name Ontario Cancer Institute, Princess Margaret Hospital
Department Applied Molecular Oncology
Lab Squire Lab
Street address 9th Floor Rm. 717, 610 University Ave
City Toronto
State/province ON
ZIP/Postal code M5G 2M9
Country Canada
 
Samples (4) GSM109284, GSM109285, GSM109286, GSM109287
Series (1)
GSE4860 Large scale copy number variation (CNV) at 14q12 is associated with the presence of genomic abnormalities in neoplasia.

Data table header descriptions
ID
CLONE_ID BAC/PAC clone ID from CHORI
CHROMOSOME_ID chromosome number
BP_START clone start position on chromosome
CYTOBAND clone cytoband position
SPOT_ID

Data table
ID CLONE_ID CHROMOSOME_ID BP_START CYTOBAND SPOT_ID
1 1 0 1p36.33 GS-232-B23
2 1 100000 1p36.33 GS-62-I8
3 RP11-421C4 1 700000 1p36.33
4 RP1-283E3 1 900000 1p36.33
5 RP4-703E10 1 2400000 1p36.32
6 RP1-163G9 1 2800000 1p36.32
7 RP11-447M5 1 4400000 1p36.31
8 RP3-491M17 1 4700000 1p36.31
9 RP11-33M12 1 5400000 1p36.31
10 RP3-438L4 1 6400000 1p36.23
11 RP3-330O12 1 8200000 1p36.22
12 RP4-633I8 1 9100000 1p36.22
13 RP11-476D13 1 9600000 1p36.22
14 1 10900000 1p36.22 AL358492
15 RP5-888M10 1 12000000 1p36.21
16 RP11-219C24 1 12400000 1p36.21
17 RP4-726F20 1 13800000 1p36.21
18 RP5-864I18 1 14600000 1p36.13
19 RP11-169K16 1 15700000 1p36.13
20 RP1-163M9 1 16400000 1p36.13

Total number of rows: 2621

Table truncated, full table size 90 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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