GEO help: Mouse over screen elements for information.
Status
Public on Jun 15, 2007
Title
MDL human 3k oligo array
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Homo sapiens
Manufacturer
Molecular Diagnostic Laboratory, Aarhus University Hospital, Skjejby, Denmark
Manufacture protocol
Detailed protocol in: Microarrays for gene expression profiling: Fabrication of Oligonucleotide microarrays, Isolation of RNA, Fluorescent labelling of cRNA, Hybridisation, and Scanning. Kruhøffer M, Magnusson NE, Aaboe M, Dyrskjøt L & Ørntoft TF. Cell Biology 4th edition – a laboratory handbook.
Contributor(s)
Dyrskjot L , Orntoft TF
Submission date
Aug 04, 2006
Last update date
Jun 15, 2007
Contact name
Lars Dyrskjot
E-mail(s)
lars@clin.au.dk
Organization name
Aarhus University Hospital, Skejby
Department
Department of Molecular Medicine
Street address
Brendstrupgaardsvej
City
Aarhus N
ZIP/Postal code
8200
Country
Denmark
Samples (808)
GSM125379 , GSM125380 , GSM125381 , GSM125382 , GSM125383 , GSM125384
GSM125385 ,
GSM125386 ,
GSM125387 ,
GSM125388 ,
GSM125389 ,
GSM125390 ,
GSM125391 ,
GSM125392 ,
GSM125393 ,
GSM125394 ,
GSM125395 ,
GSM125396 ,
GSM125397 ,
GSM125398 ,
GSM125399 ,
GSM125400 ,
GSM125401 ,
GSM125402 ,
GSM125403 ,
GSM125404 ,
GSM125405 ,
GSM125406 ,
GSM125407 ,
GSM125408 ,
GSM125409 ,
GSM125410 ,
GSM125411 ,
GSM125412 ,
GSM125413 ,
GSM125414 ,
GSM125415 ,
GSM125416 ,
GSM125417 ,
GSM125418 ,
GSM125419 ,
GSM125420 ,
GSM125421 ,
GSM125422 ,
GSM125423 ,
GSM125424 ,
GSM125425 ,
GSM125426 ,
GSM125427 ,
GSM125428 ,
GSM125429 ,
GSM125430 ,
GSM125431 ,
GSM125432 ,
GSM125433 ,
GSM125434 ,
GSM125435 ,
GSM125436 ,
GSM125437 ,
GSM125438 ,
GSM125439 ,
GSM125440 ,
GSM125441 ,
GSM125442 ,
GSM125443 ,
GSM125444 ,
GSM125445 ,
GSM125446 ,
GSM125447 ,
GSM125448 ,
GSM125449 ,
GSM125450 ,
GSM125451 ,
GSM125452 ,
GSM125453 ,
GSM125454 ,
GSM125455 ,
GSM125456 ,
GSM125457 ,
GSM125458 ,
GSM125459 ,
GSM125460 ,
GSM125461 ,
GSM125462 ,
GSM125463 ,
GSM125464 ,
GSM125465 ,
GSM125466 ,
GSM125467 ,
GSM125468 ,
GSM125469 ,
GSM125470 ,
GSM125471 ,
GSM125472 ,
GSM125473 ,
GSM125474 ,
GSM125475 ,
GSM125476 ,
GSM125477 ,
GSM125478 ,
GSM125479 ,
GSM125480 ,
GSM125481 ,
GSM125482 ,
GSM125483 ,
GSM125484 ,
GSM125485 ,
GSM125486 ,
GSM125487 ,
GSM125488 ,
GSM125489 ,
GSM125490 ,
GSM125491 ,
GSM125492 ,
GSM125493 ,
GSM125494 ,
GSM125495 ,
GSM125496 ,
GSM125497 ,
GSM125498 ,
GSM125499 ,
GSM125500 ,
GSM125501 ,
GSM125502 ,
GSM125503 ,
GSM125504 ,
GSM125505 ,
GSM125506 ,
GSM125507 ,
GSM125508 ,
GSM125509 ,
GSM125510 ,
GSM125511 ,
GSM125512 ,
GSM125513 ,
GSM125514 ,
GSM125515 ,
GSM125516 ,
GSM125517 ,
GSM125518 ,
GSM125519 ,
GSM125520 ,
GSM125521 ,
GSM125522 ,
GSM125523 ,
GSM125524 ,
GSM125525 ,
GSM125526 ,
GSM125527 ,
GSM125528 ,
GSM125529 ,
GSM125530 ,
GSM125531 ,
GSM125532 ,
GSM125533 ,
GSM125534 ,
GSM125535 ,
GSM125536 ,
GSM125537 ,
GSM125538 ,
GSM125539 ,
GSM125540 ,
GSM125541 ,
GSM125542 ,
GSM125543 ,
GSM125544 ,
GSM125545 ,
GSM125546 ,
GSM125547 ,
GSM125548 ,
GSM125549 ,
GSM125550 ,
GSM125551 ,
GSM125552 ,
GSM125553 ,
GSM125554 ,
GSM125555 ,
GSM125556 ,
GSM125557 ,
GSM125558 ,
GSM125559 ,
GSM125560 ,
GSM125561 ,
GSM125562 ,
GSM125563 ,
GSM125564 ,
GSM125565 ,
GSM125566 ,
GSM125567 ,
GSM125568 ,
GSM125569 ,
GSM125570 ,
GSM125571 ,
GSM125572 ,
GSM125573 ,
GSM125574 ,
GSM125575 ,
GSM125576 ,
GSM125577 ,
GSM125578 ,
GSM125579 ,
GSM125580 ,
GSM125581 ,
GSM125582 ,
GSM125583 ,
GSM125584 ,
GSM125585 ,
GSM125586 ,
GSM125587 ,
GSM125588 ,
GSM125589 ,
GSM125590 ,
GSM125591 ,
GSM125592 ,
GSM125593 ,
GSM125594 ,
GSM125595 ,
GSM125596 ,
GSM125597 ,
GSM125598 ,
GSM125599 ,
GSM125600 ,
GSM125601 ,
GSM125602 ,
GSM125603 ,
GSM125604 ,
GSM125605 ,
GSM125606 ,
GSM125607 ,
GSM125608 ,
GSM125609 ,
GSM125610 ,
GSM125611 ,
GSM125612 ,
GSM125613 ,
GSM125614 ,
GSM125615 ,
GSM125616 ,
GSM125617 ,
GSM125618 ,
GSM125619 ,
GSM125620 ,
GSM125621 ,
GSM125622 ,
GSM125623 ,
GSM125624 ,
GSM125625 ,
GSM125626 ,
GSM125627 ,
GSM125628 ,
GSM125629 ,
GSM125630 ,
GSM125631 ,
GSM125632 ,
GSM125633 ,
GSM125634 ,
GSM125635 ,
GSM125636 ,
GSM125637 ,
GSM125638 ,
GSM125639 ,
GSM125640 ,
GSM125641 ,
GSM125642 ,
GSM125643 ,
GSM125644 ,
GSM125645 ,
GSM125646 ,
GSM125647 ,
GSM125648 ,
GSM125649 ,
GSM125650 ,
GSM125651 ,
GSM125652 ,
GSM125653 ,
GSM125654 ,
GSM125655 ,
GSM125656 ,
GSM125657 ,
GSM125658 ,
GSM125659 ,
GSM125660 ,
GSM125661 ,
GSM125662 ,
GSM125663 ,
GSM125664 ,
GSM125665 ,
GSM125666 ,
GSM125667 ,
GSM125668 ,
GSM125669 ,
GSM125670 ,
GSM125671 ,
GSM125672 ,
GSM125673 ,
GSM125674 ,
GSM125675 ,
GSM125676 ,
GSM125677 ,
GSM125678 ,
GSM125679 ,
GSM125680 ,
GSM125681 ,
GSM125682 ,
GSM125683 ,
GSM125684 ,
GSM125685 ,
GSM125686 ,
GSM125687 ,
GSM125688 ,
GSM125689 ,
GSM125690 ,
GSM125691 ,
GSM125692 ,
GSM125693 ,
GSM125694 ,
GSM125695 ,
GSM125696 ,
GSM125697 ,
GSM125698 ,
GSM125699 ,
GSM125700 ,
GSM125701 ,
GSM125702 ,
GSM125703 ,
GSM125704 ,
GSM125705 ,
GSM125706 ,
GSM125707 ,
GSM125708 ,
GSM125709 ,
GSM125710 ,
GSM125711 ,
GSM125712 ,
GSM125713 ,
GSM125714 ,
GSM125715 ,
GSM125716 ,
GSM125717 ,
GSM125718 ,
GSM125719 ,
GSM125720 ,
GSM125721 ,
GSM125722 ,
GSM125723 ,
GSM125724 ,
GSM125725 ,
GSM125726 ,
GSM125727 ,
GSM125728 ,
GSM125729 ,
GSM125730 ,
GSM125731 ,
GSM125732 ,
GSM125733 ,
GSM125734 ,
GSM125735 ,
GSM125736 ,
GSM125737 ,
GSM125738 ,
GSM125739 ,
GSM125740 ,
GSM125741 ,
GSM125742 ,
GSM125743 ,
GSM125744 ,
GSM125745 ,
GSM125746 ,
GSM125747 ,
GSM125748 ,
GSM125749 ,
GSM125750 ,
GSM125751 ,
GSM125752 ,
GSM125753 ,
GSM125754 ,
GSM125755 ,
GSM125756 ,
GSM125757 ,
GSM125758 ,
GSM125759 ,
GSM125760 ,
GSM125761 ,
GSM125762 ,
GSM125763 ,
GSM125764 ,
GSM125765 ,
GSM125766 ,
GSM125767 ,
GSM125768 ,
GSM125769 ,
GSM125770 ,
GSM125771 ,
GSM125772 ,
GSM125773 ,
GSM125774 ,
GSM125775 ,
GSM125776 ,
GSM125777 ,
GSM125778 ,
GSM125779 ,
GSM125780 ,
GSM125781 ,
GSM125782 ,
GSM125783 ,
GSM125784 ,
GSM125785 ,
GSM125786 ,
GSM125787 ,
GSM125788 ,
GSM125789 ,
GSM125790 ,
GSM125791 ,
GSM125792 ,
GSM125793 ,
GSM125794 ,
GSM125795 ,
GSM125796 ,
GSM125797 ,
GSM125798 ,
GSM125799 ,
GSM125800 ,
GSM125801 ,
GSM125802 ,
GSM125803 ,
GSM125804 ,
GSM125805 ,
GSM125806 ,
GSM125807 ,
GSM125808 ,
GSM125809 ,
GSM125810 ,
GSM125811 ,
GSM125812 ,
GSM125813 ,
GSM125814 ,
GSM125815 ,
GSM125816 ,
GSM125817 ,
GSM125818 ,
GSM125819 ,
GSM125820 ,
GSM125821 ,
GSM125822 ,
GSM125823 ,
GSM125824 ,
GSM125825 ,
GSM125826 ,
GSM125827 ,
GSM125828 ,
GSM125829 ,
GSM125830 ,
GSM125831 ,
GSM125832 ,
GSM125833 ,
GSM125834 ,
GSM125835 ,
GSM125836 ,
GSM125837 ,
GSM125838 ,
GSM125839 ,
GSM125840 ,
GSM125841 ,
GSM125842 ,
GSM125843 ,
GSM125844 ,
GSM125845 ,
GSM125846 ,
GSM125847 ,
GSM125848 ,
GSM125849 ,
GSM125850 ,
GSM125851 ,
GSM125852 ,
GSM125853 ,
GSM125854 ,
GSM125855 ,
GSM125856 ,
GSM125857 ,
GSM125858 ,
GSM125859 ,
GSM125860 ,
GSM125861 ,
GSM125862 ,
GSM125863 ,
GSM125864 ,
GSM125865 ,
GSM125866 ,
GSM125867 ,
GSM125868 ,
GSM125869 ,
GSM125870 ,
GSM125871 ,
GSM125872 ,
GSM125873 ,
GSM125874 ,
GSM125875 ,
GSM125876 ,
GSM125877 ,
GSM125878 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (1)
GSE5479
Gene expression signatures predict outcome in non-muscle invasive bladder carcinoma - a multi-center validation study
Data table header descriptions
ID
GB_ACC
Sequence GenBank accession number used for probe design
SEQUENCE
Probe sequence
SPOT_ID
Probe type
Project ID
Alternative probe ID
ARRAY_ROW
Array row
ARRAY_COLUMN
Array column
SPOT_ROW
Spot row
SPOT_COLUMN
spot column
Data table
ID
GB_ACC
SEQUENCE
SPOT_ID
Project ID
ARRAY_ROW
ARRAY_COLUMN
SPOT_ROW
SPOT_COLUMN
1
--BLANK
1
1
1
1
2
AW772713
CCAGCGCTCTTAACCATCATGTCAGCATTTCCCGAAGTATGTTCCAAAGAACACTAT
SEQ487
1
1
1
2
3
AW855393
GAAAATCGGCTGCCTAAACCTCCCTCTGCTTCTACACATATTTAACACACTCTGTCA
SEQ489
1
1
1
3
4
AW939074
CTGTGCGGGGTAGGGTGGATTGCTGCAGAGAAGTCGGCACGTGTTAAAGCTAAAATT
SEQ491
1
1
1
4
5
BE262478
TCTTCCTGGTTGTCTACAAGGTGTACAAGTATGACCGCGCCTGCCCCGATGGGTTC
SEQ493
1
1
1
5
6
NM_004735
ACTGCTTTAAGTTATAGACTGTTACTTGTAGATTTCCATGTAATCATTGAGGTTATCACCCA
SEQ495
1
1
1
6
7
NM_000056
GTCATTGATCTGAGGACTATAATACCTTGGGATGTGGACACAATTTGTAAGT
SEQ14
1
1
1
7
8
NM_000088
AGACTGTTCTGTTCTGTTCCTTGTGTAACTGTGTTGCTGAAAGACTACCTCGTTCT
SEQ16
1
1
1
8
9
NM_000088
GATGGGTGGGGTGGGGAGGGAATCACTGGTGCTATAGAAATTGAGATGCC
SEQ18
1
1
1
9
10
NM_000211
CATGGAGACTTGAGGAGGGCTTGAGGTTGGTGAGGTTAGGTGCGTGTTTC
SEQ20
1
1
1
10
11
NM_006754
ATCTTATATGTATGGGCATTACCTCTTAGTGATATTTGTTTCCTGTCCTTTGTTG
SEQ22
1
1
1
11
12
NM_006754
TTTTCTAAATGACCCGTGGTACTTAATAGGTGTACTAAAATTGTGTTGGGAGCAGGGATTTGGA
SEQ24
1
1
1
12
13
AF070613
GCCGATAGCCTAGACCTAGAAGATGACCTTGAGTATGTAAACATTGTCTCCGTGAC
SEQ509
1
1
1
13
14
BC001971
GCCCTCCCCAGTCTCTCTTAAAGTTGGAATTTACCAGTTAATTACTCAGCAGAATGG
SEQ511
1
1
1
14
15
BC004490
CACTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
SEQ513
1
1
1
15
16
D44466
CCCTACCTGTGTCATTGGCCTTAACAAGGACTTAAAGATGCCGAAAGTTCAGTATAAATCGA
SEQ515
1
1
1
16
17
L00058
AAACGATTCCTTCTAACAGAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAATGC
SEQ517
1
1
1
17
18
M24283
TTTCTATCGGCACAAAAGCACTATATGGACTGGTAATGGTTCACAGGTTCAGAGATT
SEQ519
1
1
1
18
19
NM_002484
GGGTGGTGGAGAACATGAGTCCGTTCATCTGTCCTAAGTGCAAGAAAGAATCTC
SEQ38
1
1
1
19
20
--BLANK
1
1
1
20
Total number of rows: 3072 Table truncated, full table size 244 Kbytes .
Supplementary data files not provided