Data table |
ID |
SEQUENCE |
GC% |
Internal Repeat Score |
Self-Annealing Score |
Primary Strain |
Primary Target |
Common Name of Primary Target |
Gene Symbol |
Strain MRSA252 |
Strain MSSA476 |
Strain Mu50 |
Strain MW2 |
Strain N315 |
Strain pLW043 |
Strain COL |
5QSA00001_A_1 |
GGTAATAGCTATTATCATTTTTGAATTAATTATATTAATGTGTTTAGCAATAGCACTGGAGGTGTTGTAA |
27.14 |
34 |
104 |
MRSA252 |
SAR1563 |
hypothetical protein (pseudogene) |
|
SAR1526a::70::100.0::1.3E-10::+,SAR1563::70::100.0::1.3E-10::+ |
SAS0923a::70::100.0::1.3E-10::+ |
|
|
|
|
|
5QSA00001_A_10 |
CTTGTCTTTGATCGCCAAACATTATCAATCCCACCCTTATATTTATTTATCTTTAATATATAACAACATT |
27.14 |
33 |
80 |
N315 |
SAP030 |
hypothetical protein |
|
SAR0686::70::98.57143::3.4E-10::-,SAR0685::70::98.57143::3.4E-10::- |
|
|
|
SAP030::70::100.0::8.2E-11::+ |
|
|
5QSA00001_A_11 |
TGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGATTAGTACTCAAGACCATAAAAAATAA |
27.14 |
32 |
100 |
MSSA476 |
SAS2051 |
hypothetical protein |
|
SAR2237::70::98.57143::2.9E-10::+ |
SAS2051::70::100.0::1.1E-10::+ |
|
MW2072::70::100.0::1.1E-10::+ |
|
|
|
5QSA00001_A_12 |
ATCTAGTTCTCTTAATTAAGTTCTTATCAAAAAAACTTATCCACCTGTACTGGATAGATATGACCATCAA |
30.0 |
31 |
100 |
Mu50 |
SAV0396 |
hypothetical protein |
|
|
|
SAV0396::70::100.0::8.2E-11::+ |
|
|
|
|
5QSA00001_A_13 |
CACTTCTTTTTAGACATTGTCGAATCGAAGATTGAAACAAAGCGAACTGCGAAAAGTTTTAAAGATATTT |
31.43 |
31 |
98 |
MSSA476 |
SAS1879 |
hypothetical phage protein |
|
|
SAS1879::70::100.0::7.4E-11::+,SAS1862::70::100.0::1.3E-10::- |
|
MW1896::70::100.0::1.1E-10::+ |
|
|
|
5QSA00001_A_14 |
ATATATTTAATATTGTTTTTATTAAGCCTACCATTGTTATTATTTATCGGGAGAAAAACACATTTTTATT |
20.0 |
33 |
136 |
Mu50 |
SAV0915 |
hypothetical protein |
|
|
|
SAV0915::70::100.0::8.2E-11::+ |
|
|
|
SACOL0910::70::97.14286::5.3E-10::+ |
5QSA00001_A_15 |
AGCGCGTTTATACAGAAATGTATTTTCTGTGATGTTACGCAATGATTTAAAGCGTTATATAGATTTTTAG |
30.0 |
31 |
102 |
MSSA476 |
SAS2579a |
hypothetical protein |
|
|
SAS2579a::70::100.0::1.1E-10::+ |
|
MW2614::70::100.0::1.1E-10::+ |
|
|
|
5QSA00001_A_16 |
TATACGCGAGTATGATTTAACACCTTCCGCGTTAGGGAAATGGATAAAGCAACATCAAAACACAGGTTGA |
40.0 |
28 |
80 |
MSSA476 |
SAS0050 |
transposase (fragment) |
|
SAR0081::67::92.537315::1.6E-8::+ |
SAS0050::70::100.0::8.2E-11::+ |
|
MW0050::70::100.0::8.2E-11::+ |
|
|
|
5QSA00001_A_17 |
CGGACGATTGTGTTCTAATCATAGAGGCTCAATGGAAGAACTACGGGACGAAAACCAGACGATAACTCAA |
44.29 |
31 |
81 |
MSSA476 |
SAS2107b |
hypothetical protein |
|
|
SAS2107b::70::100.0::1.0E-10::+ |
|
MW2135::70::100.0::1.0E-10::+ |
|
|
|
5QSA00001_A_18 |
GATGACAACCAATTACTATGTTGAATCTATAAAATTAAAATTGAATTTCATTATGAATATCGATATAATG |
21.43 |
34 |
122 |
COL |
SACOL0933 |
hypothetical protein |
|
|
|
|
|
|
|
SACOL0933::70::100.0::8.2E-11::+ |
5QSA00001_A_19 |
TTAATTATTCTTTGTATGATACCTTAAATACCTTATTACATATCCCATATGAAAACGGCTTTTTTATTAT |
22.86 |
32 |
97 |
N315 |
SAS038 |
hypothetical protein |
|
SAR1273a::70::97.14286::6.0E-10::+ |
SAS1231a::70::98.57143::2.3E-10::+ |
SAV1299::70::100.0::1.0E-10::+ |
MW1181::70::98.57143::2.6E-10::+ |
SAS038::70::100.0::1.0E-10::+ |
|
|
5QSA00001_A_2 |
GTATATAAAAAATGCTTCTGCAATAGATGCAATAAACATGCAATACAATATGGAGGCGAAGTAAATGAAA |
30.0 |
33 |
84 |
COL |
SACOL2595 |
hypothetical protein |
|
|
|
|
|
|
|
SACOL2595::70::100.0::8.4E-11::+ |
5QSA00001_A_20 |
TCGTTGTGCACACAACAAAAATTGAATCATGAATTACAAGCAAAAGTAGCGGTGATTGTTAAAATTGATG |
32.86 |
32 |
80 |
COL |
SACOL1061 |
hypothetical protein |
|
|
|
|
|
|
|
SACOL1061::70::100.0::8.2E-11::+ |
5QSA00001_A_21 |
TCCATATATGCTTTGTAGTCAAAACTGCTAGCGGATATTGTTATCTTAACAAACGTGAAGCTCAAGCAGC |
38.57 |
30 |
94 |
N315 |
SAS051 |
hypothetical protein |
|
SAR1746::70::100.0::1.0E-10::+ |
SAS1595::70::100.0::1.0E-10::+ |
SAV1666::70::100.0::1.0E-10::+ |
MW1610::70::100.0::1.0E-10::+ |
SAS051::70::100.0::1.0E-10::+ |
|
SACOL1713::70::100.0::8.9E-11::+ |
5QSA00001_A_22 |
GATGACTATTAAAGTGCGAAAAACAAATAAAAAAGAGAAAATAGAATTTTTAATAGGGACGTTTATAATT |
22.86 |
33 |
89 |
COL |
SACOL1334 |
hypothetical protein |
|
|
|
|
|
|
|
SACOL1334::70::100.0::8.2E-11::+ |
5QSA00001_A_23 |
AGGCGATGTGAAAGTTAAAGAGCGGGAGATAGAGATATTAAGAAGTAGATTGAGACATTTTGAAGGTTAA |
35.71 |
32 |
48 |
Mu50 |
SAV0883 |
hypothetical protein |
|
|
|
SAV0883::70::100.0::1.0E-10::+ |
|
|
|
|
5QSA00001_A_24 |
AAAATACGAACGAATGAGCGATATGATAATATAGATAAGAATGATTTTAATTTAGGAGGCCTTTATGGTG |
30.0 |
33 |
78 |
COL |
SACOL1890 |
hypothetical protein |
|
|
|
|
|
|
|
SACOL1890::70::100.0::8.2E-11::+ |
5QSA00001_A_3 |
ATGAAAGTTGCCTTTTTATTTTTGGTAAAAGTTCATGCGTCAGTGAATTGTGTAAGTTTTTCAAAAAGTA |
28.57 |
34 |
106 |
N315 |
SAS046 |
hypothetical protein |
|
|
|
SAV1477::70::100.0::1.2E-10::+ |
|
SAS046::70::100.0::1.2E-10::+ |
|
|
5QSA00001_A_4 |
CAATTAAAAAAGCATCAAACAGTAATATGCTGCTTGATGCAATATGGTATTGGTTAAAATGTATTGTCTC |
30.0 |
34 |
126 |
MRSA252 |
SAR395a |
hypothetical protein |
|
SAR395a::70::100.0::8.4E-11::+ |
|
|
|
|
|
|
5QSA00001_A_5 |
CTAATTCCTGTTAACTGTATTATAACAACTTTACAGCAAAAAAATGCAAAATCAACTAATAAATTAATGA |
22.86 |
33 |
103 |
MSSA476 |
SAS2401a |
hypothetical protein |
|
|
SAS2401a::70::100.0::1.2E-10::+ |
|
MW2436::70::100.0::1.2E-10::+ |
|
|
|