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Platform GPL4362 Query DataSets for GPL4362
Status Public on Mar 31, 2007
Title PIQOR Immunology Microarray, Mouse CTID580
Technology type spotted DNA/cDNA
Distribution commercial
Organism Mus musculus
Manufacturer Miltenyi Biotec GmbH
Manufacture protocol Defined 200-400 bp fragments of selected cDNAs were generated by RT-PCR, cloned and sequence-verified. Amplified and purified cDNA inserts were spotted in quadruplicate on PIQOR slides using a proprietary piezoelectric spotter. The PIQOR slides were coated in a 2 step process generating a surface which covalently binds DNA molecules.
 
Description The PIQOR Immunology Microarray is composed of 1076 mouse specific cDNAs. These cDNAs include for each array six house-keeping genes as positive controls. In addition four E. coli DNA fragments and the corresponding in vitro transcribed RNAs (spiking controls) provide a control for the labeling and hybridisation efficiency. Two negative controls are given by spotted herring sperm DNA and buffer. Genes are spotted in quadruplicates.
 
Web link http://www.miltenyibiotec.com
Contributor(s) Gerstmayer B, Bosio A
Submission date Sep 21, 2006
Last update date Mar 31, 2007
Contact name Sebastian Knoebel
E-mail(s) sebastian@miltenyibiotec.de
Phone 0221-95048220
Fax 0221-9504848
URL http://www.miltenyibiotec.com
Organization name MiltenyiBiotec GmbH
Street address Nattermannallee 1
City Cologne
ZIP/Postal code 50829
Country Germany
 
Samples (1) GSM137074
Series (1)
GSE5670 Hepatic stellate cells (HSC), quiescent and activated - influence of ltbp1-k.o. on activation in vitro

Data table header descriptions
ID
GB_ACC Genbank accession number
uniprot Uniprot accession number
ORF
SPOT_ID
miltenyi_id cDNA identifier at Miltenyi Biotec GmbH

Data table
ID GB_ACC uniprot ORF SPOT_ID miltenyi_id
1 Control RNA #1 4806
2 NM_009923 P16330, Q61424, Q8C7 CNP 3895
3 NM_008484 Q61087 LAMB3 2376
4 NM_054077 Q9JK53 PRELP 2526
5 NM_009506 P97953 VEGC 2184
6 NM_007900 Q07139 ECT2 1198
7 NM_008370 P21183 IL5RA 336
8 NM_007779 P09581, Q9DBH9 CSF1R 320
9 NM_010765 Q6QME4, Q6QME5, Q6QM MAPKAPK5 15177
10 NM_011946 Q61083 MAP3K2 15490
11 NM_010169 P97507, P30558 F2R 9639
12 NM_009760 O55003 BNIP3 7527
13 NM_025968 Q9CPS1 LB4D 5487
14 NM_145426 Q8BHK5, Q922T2 MFAP3 2486
15 NM_010239 P09528 FTH 1365
16 NM_011258 P35601 AC15 2099
17 NM_010494 P35330, Q9D8Q4 ICAM2 304
18 NM_172944 Q60677 ITGAE 306
19 NM_009689 Q923F7, Q9WU53, Q9WU BIRC5_2 14723
20 NM_008855 P04411, P68404, P044 PRKCB_3 14735

Total number of rows: 4304

Table truncated, full table size 160 Kbytes.




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