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Platform GPL4609 Query DataSets for GPL4609
Status Public on Dec 02, 2006
Title Zebrafish 34K Oligo array
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Danio rerio
Manufacturer NHGRI Microarray Core facility
Manufacture protocol please see the NHGRI Microarray Core Facility website
Support glass
Coating Epoxy
 
 
Web link http://magic2.nhgri.nih.gov/cgi-bin/GCORE/maservice.shtml
Contributor(s) Elkahloun AG
Submission date Nov 29, 2006
Last update date Dec 02, 2006
Contact name abdel elkahloun
E-mail(s) abdel@mail.nih.gov
Organization name nih
Street address 50 south dr
City bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (26) GSM171953, GSM171954, GSM171955, GSM171956, GSM171957, GSM171958 
Series (2)
GSE8076 Identification of differentially-expressed genes between FoxH1 morpholino and control in zebrafish embryos.
GSE8654 Identification of mesendoderm precursor- and neurectoderm precursor-enriched genes in Zebrafish embryos

Data table header descriptions
ID
GENE_NAME gene description
CLONE ID GenBank Accession Number or manufecturer oligo ID
GB_ACC GenBank accession number
SPOT_ID
PLATE_POSITION Unique Plate Position

Data table
ID GENE_NAME CLONE ID GB_ACC SPOT_ID PLATE_POSITION
CP1A1 Danio rerio beta actin mRNA, complete cds. AF025305 AF025305 CP1A1
CP1A2 Danio rerio beta actin mRNA, complete cds. AF025305 AF025305 CP1A2
CP1A3 Danio rerio DeltaA (deltaA) mRNA, complete cds. AF030031 AF030031 CP1A3
CP1A4 Danio rerio mRNA for crystallin B1 protein. AJ317957 AJ317957 CP1A4
CP1A5 Danio rerio DeltaC (delC) mRNA, complete cds. AF146429 AF146429 CP1A5
CP1A6 Danio rerio mRNA for VAL-opsin, complete cds. AB035276 AB035276 CP1A6
CP1A7 Danio rerio deltaB mRNA, complete cds. AF006488 AF006488 CP1A7
CP1A8 Danio rerio mRNA for putative b,b-carotene-15,15'-dioxygenase (b-diox gene). AJ290390 AJ290390 CP1A8
CP1A9 Brachydanio rerio (vhh-1) mRNA, complete cds. L27585 L27585 CP1A9
CP1A10 Danio rerio paired box protein pax2.1 splice variant mRNA, complete cds. AF067532 AF067532 CP1A10
CP1A11 Danio rerio mRNA for F-spondin1, complete cds. AB006086 AB006086 CP1A11
CP1A12 Danio rerio clone RDS2 retinal degradation slow mRNA, partial cds. AF210643 AF210643 CP1A12
CP1A13 Danio rerio mRNA for F-spondin2, complete cds. AB006087 AB006087 CP1A13
CP1A14 Danio rerio clone RDS4 retinal degradation slow mRNA, partial cds. AF210644 AF210644 CP1A14
CP1A15 Danio rerio CASK mRNA, complete cds. AF252546 AF252546 CP1A15
CP1A16 Danio rerio rod phosphodiesterase gamma subunit mRNA, partial cds. AY050506 AY050506 CP1A16
CP1A17 Danio rerio invariant chain-like protein 2 (Iclp-2) mRNA, complete cds. AF116539 AF116539 CP1A17
CP1A18 Danio rerio mRNA for exo-rhodopsin, complete cds. AB025312 AB025312 CP1A18
CP1A19 Danio rerio claudin7 mRNA, complete cds. AF260240 AF260240 CP1A19
CP1A20 Danio rerio blue-sensitive opsin (bluops) mRNA, complete cds. AF109372 AF109372 CP1A20

Total number of rows: 35328

Table truncated, full table size 5316 Kbytes.




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Supplementary data files not provided

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