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Status
Public on Dec 13, 2006
Title
Galbraith Laboratory Operon Long Oligonucleotide Microarray Version 1.0 (AtOligo 3.1.2.Y and AtOligio 3.2.2.Y)
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Arabidopsis thaliana Manufacturer
The Galbraith Laboratory, University of Arizona
Manufacture protocol
GeneMachines, Omnigrid
Support
glass
Coating
aminosilane
Description
This oligonucleotide array is produced from the Operon Version 1.0 Array-Ready Oligo set (AROS). The Arabidopsis V1.0 AROS is designed from UniGene Build At. #4 (www.operon.com). This set comprises 26,000 oligonucleotides. Additional elements are printed as controls. This platform represents slides AtOligo 3.1.2.1-AtOligo 3.1.2.100 and AtOligo 3.2.2.1-AtOligo 3.2.2.100 (http://www.ag.arizona.edu/microarray ).
Web link
http://ag.arizona.edu/microarray Contributor(s)
Galbraith DW Submission date
Dec 07, 2006
Last update date
Dec 13, 2006
Contact name
David William Galbraith
E-mail(s)
galbraith@arizona.edu Phone
520-621-9153
URL
http://latin.arizona.edu/galbraith Organization name
University of Arizona
Department
Plant Sciences and Bio5 Institute
Lab
Galbraith
Street address
303 Forbes Building
City
Tucson
State/province
AZ
ZIP/Postal code
85721
Country
USA
Samples (33)
GSM328580 , GSM328581 , GSM328582 , GSM328583 , GSM328584 , GSM328585
GSM328586 ,
GSM328587 ,
GSM328588 ,
GSM328589 ,
GSM328590 ,
GSM328591 ,
GSM328592 ,
GSM328593 ,
GSM328594 ,
GSM328595 ,
GSM328596 ,
GSM328597 ,
GSM328598 ,
GSM328599 ,
GSM328600 ,
GSM328601 ,
GSM422925 ,
GSM422926 ,
GSM422927 ,
GSM813900 ,
GSM813901 ,
GSM813902 ,
GSM813903 ,
GSM813904 ,
GSM813905 ,
GSM813906 ,
GSM813907 Series (3)
GSE13113 Arabidopsis unfertilized pistil development and senescence
GSE16875 Arabidopsis: C24 vs rst1
GSE32889 Interaction between gibberellins and brassinosteroids during etiolated growth in Arabidopsis.
Data table header descriptions ID Locus_Name Chromosomal based gene locus names
Oligo_ID Assigned by OPERON, or by STRATAGENE or the Galbraith Lab (control elements)
Description Description of the gene locus
ORF SPOT_ID
Data table ID Locus_Name Oligo_ID Description ORF SPOT_ID 1_01_01
At5g46430
AY042872
ribosomal protein L32; protein id: At5g46430.1
At5g46430 1_01_02
At1g64740
M21414
alpha-tubulin, putative; protein id: At1g64740.1
At1g64740 1_01_03
At5g46430
AY042872
ribosomal protein L32; protein id: At5g46430.1
At5g46430 1_01_04
At1g64740
M21414
alpha-tubulin, putative; protein id: At1g64740.1
At1g64740 1_01_05
At5g46430
AY042872
ribosomal protein L32; protein id: At5g46430.1
At5g46430 1_01_06
At1g64740
M21414
alpha-tubulin, putative; protein id: At1g64740.1
At1g64740 1_01_07
At5g46430
AY042872
ribosomal protein L32; protein id: At5g46430.1
At5g46430 1_01_08
At1g64740
M21414
alpha-tubulin, putative; protein id: At1g64740.1
At1g64740 1_01_09
At1g12470
AC025416
hypothetical protein; protein id: At1g12470.1
At1g12470 1_01_10
At1g05220
AC000098
hypothetical protein; protein id: At1g05220.1
At1g05220 1_01_11
At1g23040
AF000657
expressed protein; protein id: At1g23040.1
At1g23040 1_01_12
At1g31390
AC007654
hypothetical protein; protein id: At1g31390.1
At1g31390 1_01_13
At3g29800
AP000736
mitochondrial protein-like; contains similarity to AAA-type ATPase; protein id: At3g29800.1
At3g29800 1_01_14
At1g80470
AC018849
F-box protein; protein id: At1g80470.1
At1g80470 1_01_15
At1g23100
AC002311
10kDa chaperonin (CPN10), putative; protein id: At1g23100.1
At1g23100 1_01_16
At1g12520
AF179371
copper/zinc superoxide dismutase copper chaperone, putative; protein id: At1g12520.1
At1g12520 1_01_17
At1g35400
AC023064
hypothetical protein; protein id: At1g35400.1
At1g35400 1_01_18
At1g73790
AC012679
expressed protein; protein id: At1g73790.1
At1g73790 1_01_19
At1g30010
AC022455
unknown protein; protein id: At1g30010.1
At1g30010 1_01_20
At1g41790
AC022456
T4I21.8; pseudogene, Gypsy Ty-3 element (fragment)
At1g41790
29952 2514 Kbytes .Supplementary data files not provided
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