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Platform GPL4940 Query DataSets for GPL4940
Status Public on Mar 07, 2007
Title [Ecoli_antisense] Affymetrix E. coli 1286 Antisense Array
Technology type in situ oligonucleotide
Distribution commercial
Organism Escherichia coli K-12
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
Description The GeneChip E. coli 1286 Antisense Array (manufactured circa 2001) can be used for examining expression of E. coli genes. The array contains probe sets to detect the antisense strand of open reading frames.
Keywords = high density oligonucleotide array
Submission date Mar 07, 2007
Last update date Apr 15, 2009
Organization Affymetrix, Inc.
Phone 888-362-2447
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA

Data table header descriptions
ID Affymetrix Probe Set ID
ORF open reading frame
map (centisome)

Data table
ID ORF kind genename colibri operon map (centisome) GeneChip SWPRO SWPRank N-abd Rank Function
b0001 b0001 CDS thrL thrL thrABC 0 b0001_w-thrL Amino acid biosynthesis and metabolism
b0002 b0002 CDS thrA thrA thrABC 0 b0002_w-thrA Amino acid biosynthesis and metabolism
b0003 b0003 CDS thrB thrB thrABC 0.1 b0003_w-thrB Amino acid biosynthesis and metabolism
b0004 b0004 CDS thrC thrC thrABC 0.1 b0004_w-thrC 0.286 53 560 95 Amino acid biosynthesis and metabolism
b0005 b0005 CDS b0005 0.1 b0005_w-w0005 Hypothetical, unclassified, unknown
b0006 b0006 CDS yaaA yaaA 0.1 b0006_c-yaaA Hypothetical, unclassified, unknown
b0007 b0007 CDS yaaJ yaaJ 0.2 b0007_c-yaaJ Transport and binding proteins
b0008 b0008 CDS talB talB 0.2 b0008_w-talB 0.285 54 380 119 Energy metabolism
b0009 b0009 CDS mog mog 0.2 b0009_w-mog Biosynthesis of cofactors, prosthetic groups and carriers
b0010 b0010 CDS yaaH yaaH 0.2 b0010_c-yaaH Hypothetical, unclassified, unknown
b0011 b0011 CDS b0011 yaaW 0.2 b0011_c-w0011 Putative enzymes
b0012 b0012 CDS htgA yaaW 0.2 b0012_w-htgA Cell processes (incl. adaptation, protection)
b0013 b0013 CDS yaaI yaaI 0.2 b0013_c-yaaI Hypothetical, unclassified, unknown
b0014 b0014 CDS dnaK dnaK dnaKJ 0.3 b0014_w-dnaK 0.633 13 1300 52 Cell processes (incl. adaptation, protection)
b0015 b0015 CDS dnaJ dnaJ dnaKJ 0.3 b0015_w-dnaJ Cell processes (incl. adaptation, protection)
b0016 b0016 CDS yi81_1 0.3 null phage, transposon, or plasmid
b0017 b0017 CDS yi82_1 0.3 null Hypothetical, unclassified, unknown
b0018 b0018 CDS gefL gefL 0.4 b0018_c-gefL Cell processes (incl. adaptation, protection)
b0019 b0019 CDS nhaA nhaA nhaAR 0.4 b0019_w-nhaA Transport and binding proteins
b0020 b0020 CDS nhaR nhaR nhaAR 0.4 b0020_w-nhaR Transport and binding proteins

Total number of rows: 4405

Table truncated, full table size 359 Kbytes.

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Supplementary data files not provided

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