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Status
Public on Apr 10, 2007
Title
MLRG Human 21K V12.0
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
Montpellier Génopole Microarray core facility
Manufacture protocol
Manufacturing microarrays
Support
glass
Coating
aminosilane
Description
The Human Genome Oligo Set Version 2.0 contains
Web link
http://www.genopole-montpellier-lr.org/PF/transcriptome/index.htm Contributor(s)
Severac D , Aknin C , Dantec C Submission date
Mar 28, 2007
Last update date
Jun 11, 2010
Contact name
Laurent Journot
E-mail(s)
mgx@igf.cnrs.fr URL
http://www.mgx.cnrs.fr/ Organization name
MGX - Montpellier GenomiX
Lab
Institut de Génomique Fonctionnelle (IGF)
Street address
141 rue de la Cardonille
City
Montpellier
ZIP/Postal code
34094 - Cedex 05
Country
France
Samples (155)
GSM249296 , GSM249524 , GSM249527 , GSM249529 , GSM249530 , GSM249531
GSM249532 ,
GSM249533 ,
GSM249534 ,
GSM249535 ,
GSM249536 ,
GSM249537 ,
GSM249538 ,
GSM249539 ,
GSM249540 ,
GSM249541 ,
GSM249542 ,
GSM249543 ,
GSM249544 ,
GSM249545 ,
GSM249546 ,
GSM249547 ,
GSM249548 ,
GSM249549 ,
GSM249551 ,
GSM249552 ,
GSM249553 ,
GSM249555 ,
GSM249556 ,
GSM249557 ,
GSM249558 ,
GSM249559 ,
GSM249560 ,
GSM249561 ,
GSM249563 ,
GSM249564 ,
GSM249565 ,
GSM249566 ,
GSM249567 ,
GSM249595 ,
GSM249596 ,
GSM249597 ,
GSM249598 ,
GSM249599 ,
GSM249600 ,
GSM249601 ,
GSM249602 ,
GSM249603 ,
GSM249604 ,
GSM249605 ,
GSM249606 ,
GSM249607 ,
GSM249608 ,
GSM249609 ,
GSM249610 ,
GSM249611 ,
GSM249612 ,
GSM249613 ,
GSM249614 ,
GSM249615 ,
GSM249616 ,
GSM249617 ,
GSM249618 ,
GSM249619 ,
GSM249620 ,
GSM249622 ,
GSM249623 ,
GSM249624 ,
GSM249625 ,
GSM249627 ,
GSM249628 ,
GSM249629 ,
GSM249630 ,
GSM249631 ,
GSM249632 ,
GSM249633 ,
GSM249634 ,
GSM249635 ,
GSM249636 ,
GSM249637 ,
GSM249638 ,
GSM249639 ,
GSM249640 ,
GSM249641 ,
GSM249642 ,
GSM249643 ,
GSM249644 ,
GSM249646 ,
GSM249647 ,
GSM249648 ,
GSM249649 ,
GSM249650 ,
GSM249651 ,
GSM249652 ,
GSM249653 ,
GSM249654 ,
GSM249655 ,
GSM249657 ,
GSM249658 ,
GSM249659 ,
GSM249663 ,
GSM249664 ,
GSM249665 ,
GSM249666 ,
GSM249667 ,
GSM249668 ,
GSM249669 ,
GSM249670 ,
GSM249681 ,
GSM249682 ,
GSM249683 ,
GSM249684 ,
GSM249685 ,
GSM249686 ,
GSM249687 ,
GSM249688 ,
GSM249689 ,
GSM249690 ,
GSM249691 ,
GSM249692 ,
GSM249693 ,
GSM249694 ,
GSM249695 ,
GSM249696 ,
GSM249697 ,
GSM249698 ,
GSM249699 ,
GSM249700 ,
GSM249701 ,
GSM249702 ,
GSM249704 ,
GSM249705 ,
GSM249706 ,
GSM249707 ,
GSM249708 ,
GSM249709 ,
GSM249710 ,
GSM249711 ,
GSM249713 ,
GSM249772 ,
GSM249952 ,
GSM250002 ,
GSM250004 ,
GSM250006 ,
GSM250007 ,
GSM250009 ,
GSM250010 ,
GSM250011 ,
GSM250012 ,
GSM250013 ,
GSM250014 ,
GSM250015 ,
GSM250016 ,
GSM250017 ,
GSM250018 Series (1)
GSE9893 A gene expression signature predicting the recurrence of tamoxifen-treated primary breast cancer.
Data table header descriptions ID Block The block number on the array
Block Column Meta column
Block Row Meta row
Spot Column Spot Column in the block
Spot Row Spot row in the block
Plate Number Number plate in the spotter
384_plate_position Position of the oligos in the plate
384_plate_number Plate ID
Oligo_ID Oligo ID
GB_accession GeneBank accession
UniGene_ID Unigene Accession
Gene_Symbol Gene symbol
Description 1 SEQUENCE RegSeq Description 2 GB_LIST GenBank accession
CLONE_ID SPOT_ID
Data table ID Block Block Column Block Row Spot Column Spot Row Plate Number 384_plate_position 384_plate_number Oligo_ID GB_accession UniGene_ID Gene_Symbol Description 1 SEQUENCE RegSeq Description 2 GB_LIST CLONE_ID SPOT_ID 1
1
1
1
1
1
1
C1
0
1PC
Positive control 1
souris melange de House Keeping gene
souris melange de House Keeping gene
2
1
1
1
1
2
3
H13
2
H200000707
NM_001033
2934
RRM1
Ribonucleotide reductase M1 polypeptide
CATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAG
NM_001033
ribonucleotide reductase M1 polypeptide
NM_001033 3
1
1
1
1
3
6
K13
5
H200001586
NM_018210
8083
FLJ10769
Hypothetical protein FLJ10769
CAGCACAGCCGTGTCCTTAGGGATGTTCGCGTCCAGTAAAGACACTGGTAACTGCGGTTTCAGCCAACA
NM_018210
hypothetical protein FLJ10769
NM_018210 4
1
1
1
1
4
9
P1
8
H200003029
NM_016936
21479
UBN1
Ubinuclein 1
AAGGTGAGTCTGAACTGACTGCTCCAGCTAAGTGATCAGGCACGTTGAGAGTATATGGTGTCCTCAGCA
NM_016936
ubinuclein 1
NM_016936 5
1
1
1
1
5
12
D1
11
H200004097
AK023798
31532
Homo sapiens mRNA; cDNA DKFZp434F172 (from clone DKFZp434F172)
TGTGAGAAACATCCTGTCAGGCAGGTCCCAGGCCTAACCCCTGGCTGCACTAAATTCCTTCATTATCAG
XM_499179
hypothetical protein LOC92249
XM_499179 6
1
1
1
1
6
15
G1
14
H200004976
NM_016656
50282
RAGB
GTP-binding protein ragB
AGGTCTATTATCTTTGCAAATTATATTGCCAGAGACACACGTCGCCTTGGCGCAACAATACTAGACCGT
NM_016656
Ras-related GTP binding B
NM_016656 7
1
1
1
1
7
17
L13
16
H200006051
Z24725
75260
MIG2
Mitogen inducible 2
CTCTAATGCCTGGACTGGCCATGTTCTAGTCTGTTGCGCTGTTACAATCTGTATTGGTGCTAGTCAGAA
NM_006832
pleckstrin homology domain containing, family C (with FERM domain) member 1
NM_006832 8
1
1
1
1
8
20
O13
19
H200006930
BC008999
82324
KIAA0157
KIAA0157 protein
GCAAGACCCACCATTTATGACAAGGACAGCCATGAGGTTAATACTTGGAGTTTAACTGCCTTCCCTTTG
NM_032182
KIAA0157
NM_032182 9
1
1
1
1
9
23
C13
22
H200007998
AF332224
171857
Homo sapiens testis protein mRNA, partial cds
GACGATTGGTGCCAAACAGGGCAGAACGCAACTCAGCTCTGGGTTTGTGAATAGCACAATGGAAGAAGC
Homo sapiens testis protein mRNA, partial cds
10
1
1
1
1
10
26
H1
25
H200009441
NM_020672
288998
LOC57402
S100-type calcium binding protein A14
TCATCTCTGCAAAGTTCAGCTTCCTTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCT
NM_020672
S100 calcium binding protein A14
NM_020672 11
1
1
1
1
11
29
K1
28
H200010320
NM_002031
89426
FRK
Fyn-related kinase
TCCTCAGATTGCTGAATCCCATCAGGCTGTTATTATGAAGGAATTTGATTGCTTTGCTGCACAGCAGGA
NM_002031
fyn-related kinase
NM_002031 12
1
1
1
1
12
31
P13
30
H200011395
NM_014720
105751
SLK
Ste20-related serine/threonine kinase
CCGGGCTCGCGCGGGAGAGCAGGGAAGAGAAACTTTGCCTTTTATTGTTTTTAGTCCTTAAGTGCAAGG
Ste20-related serine/threonine kinase
13
1
1
1
1
13
34
D13
33
H200012463
NM_016249
123536
MAGEE1
Melanoma antigen, family E, 1, cancer/testis specific
CAGGGCAGTTTAGGTTCTAGGTAGTGGAGGGCCAGGTGGGGCTCGAGGAACGTAGTGTTCTTTGCATTT
NM_016249
melanoma antigen family C, 2
NM_016249 14
1
1
1
1
14
37
G13
36
H200013342
BC004287
141693
Homo sapiens, clone IMAGE:3618365, mRNA
GCTGGCATCTACTTGAAATGGGCATCAAGAGACCACCAAATGTTTACAGTTTCTGTGGCCCGTTTAAGT
IMAGE:3618365
Homo sapiens, clone IMAGE:3618365, mRNA
15
1
1
1
1
15
40
L1
39
H200014785
NM_003734
198241
AOC3
Amine oxidase, copper containing 3 (vascular adhesion protein 1)
TCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATTGGGAGTAGGAGTTGCTCCTA
NM_003734
amine oxidase, copper containing 3 (vascular adhesion protein 1)
NM_003734 16
1
1
1
1
16
43
O1
42
H200015664
AK057077
239500
MGC13114
Hypothetical protein MGC13114
TTTGACCTGATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTG
NM_032366
hypothetical protein MGC13114
NM_032366 17
1
1
1
1
17
46
C1
45
H200016732
AL136826
271277
LOC56963
Hypothetical protein from EUROIMAGE 363668
GTCTAAACAGAGAAGAGATCCTTGACTTCTGTTCCTCTCCCTCCTGCAGATGCAAGAGCTCCTGGGCAG
NM_020211
RGM domain family, member A
NM_020211 18
1
1
1
1
18
48
H13
47
H200017807
NM_012373
283763
OR3A3
Olfactory receptor, family 3, subfamily A, member 3
TGTGGCACCCTTGGTCTTCATCAGTGTGTCCTATGCCCATGTGGTAGCTGCTGTGCTGCAAATCCGCTC
NM_012373
olfactory receptor, family 3, subfamily A, member 3
NM_012373 19
1
1
1
1
19
51
K13
50
H200018686
AF130097
306963
Homo sapiens clone FLC0964 PRO2946 mRNA, complete cds
AACATGAGATTGGGAATATTTGAGGGACTGACCCAGGCTAAGACAACTATAAAACCACAAAATACCCAG
Homo sapiens clone FLC0964 PRO2946 mRNA, complete cds
20
1
1
1
1
20
54
P1
53
H200020129
M20707
347384
Human kappa-immunoglobulin germline pseudogene (Chr22.4) variable regio
GCCAGCCTCCATCTCCTGCAGATCTAGTGAGAGCCTCTTGGATACTGATGATGAATACACCTATTTGAA
XM_496488
similar to Ig kappa chain
XM_496488
22656 4995 Kbytes .Supplementary data files not provided
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