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Platform GPL5122 Query DataSets for GPL5122
Status Public on Apr 27, 2007
Title M1 and M18 array
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Streptococcus pyogenes
Manufacturer Fischetti Laboratory, Rockefeller University
Manufacture protocol none
 
 
Submission date Apr 25, 2007
Last update date Apr 27, 2007
Contact name Patricia A. Ryan
E-mail(s) ryanp@rockefeller.edu
Phone 212-327-8165
Fax 212-327-7584
URL http://www.rockefeller.edu/vaf
Organization name Rockefeller University
Department Bacterial Pathogenesis and Immunology
Street address 1230 York Ave
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Samples (8) GSM184346, GSM184347, GSM184348, GSM184349, GSM184350, GSM184351 
Series (1)
GSE7620 M1 serotype (strain SF370): pharyngeal cell adherence vs. association

Data table header descriptions
ID
GENOME_ACC Streptococcus pyogenes M1 GAS, complete genome
GI_RANGE GI[strart..end]
ORF Spy number provided for each opening reading frame in SF370 genome (GenBank Accession AE004092.1)
SEQUENCE Sequence (5' to 3') of the oligonucleotide spotted on the array

Data table
ID GENOME_ACC GI_RANGE ORF SEQUENCE
SPy0002 AE004092.1 SPy0002 CATGCCTATAATAAAATCAAAAACATGATCAGCCAGGACGAAAGCCTTAGGATCGA
SPy0003 AE004092.1 SPy0003 CTGAGGTTGGTAAGGTAAACGAGGATTTAGATATTGTTAGTCAGTCTGGTAGTGATTT
SPy0004 AE004092.1 SPy0004 CAGTGTACTAACTGTCAGCATGTGATTATGATGAGTCGTTATGATTTTGAGCGAA
SPy0006 AE004092.1 SPy0006 TAAATTAACCAGAGCAGCTTATCATCTCTTAGGCCTTGGAACCTATTTTACAGCAG
SPy0007 AE004092.1 SPy0007 CCACATTGGAACTCAGGAATTTAACCGAATCAAAGTTGGTATTGGACGACCTTTAA
SPy0008 AE004092.1 SPy0008 TGAGCTTATGGATCGTTTTGGAGAGTATCCTGATCAAGTTGCCTATTTGTTAGAGA
SPy0009 AE004092.1 SPy0009 CAGTAGCAAAAGAAGTTGCGGATAAGGGACGAATTAAAGTTAATGGGATACTTGC
SPy0010 AE004092.1 SPy0010 GCTAGGGCAAAATACTATTTATCGCGTGAAGGAGAAATGATTTATCCTATTCCAGG
SPy0012 AE004092.1 SPy0012 GTGTTGAAGACCTACTGAAAGCTGTAGCACAACAATCGGATAATGTAGCAACTAATA
SPy0013 AE004092.1 SPy0013 GCTTTAGTAACAGCTCACCATTCAGATGATCAAGCAGAAACTATTTTGATGAGGC
SPy0015 AE004092.1 SPy0015 CTCATAAATTGATTGCTGAAGCTCTTCTCAAATATGAAACTCTAGACGCTGCACA
SPy0016 AE004092.1 SPy0016 TCAAAATGCTACTCTTGTCACTGGACTACTTGCTATGATTTGTGCGGGAATATTTC
SPy0019 AE004092.1 SPy0019 CCGCTAATATGGCAATGGCTGAAGAAAACCAAAATACATTACGTACTCAACAAGCT
SPy0020 AE004092.1 SPy0020 AATTGCAGACTATTTTGATCGTCATGGTTTAGTGGGTGAAGATGTTGTCGTTGTTAGT
SPy0021 AE004092.1 SPy0021 GCACTGATTTACCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAA
SPy0022 AE004092.1 SPy0022 CGTGGTCGGACAATTAGTAGAAGAATTTGCTAAGGAGACTCAAGTAAATGACTAG
SPy0023 AE004092.1 SPy0023 GACTAGACAGGAGATTTTTGAAAGGCTGATTAACTTAATTCAGAAGCAAAGAAGC
SPy0024 AE004092.1 SPy0024 ATGAACTCTTGAAAGGTTGGTTTGCTCAGATTGGGCTTAACTTGATTGACTTCAAG
SPy0025 AE004092.1 SPy0025 ATCTGGAGCCAATATGTGGACTTTGACGGACAACCATCTATGGATTCTAAATACAAT
SPy0026 AE004092.1 SPy0026 AAGGATTGTCGGATTATTAAGAGAAGCAGGAGCTAGTGAAGTACATGTTGCTATAG

Total number of rows: 1945

Table truncated, full table size 164 Kbytes.




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Supplementary data files not provided
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