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| Status |
Public on Oct 07, 2003 |
| Title |
MWG E. coli K12 Array |
| Technology type |
spotted oligonucleotide |
| Distribution |
commercial |
| Organism |
Escherichia coli K-12 |
| Manufacturer |
MWG Biotech |
| Manufacture protocol |
see manufacturer's web site
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| |
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| Description |
4239 E. coli K12 specific oligonucleotide probes represent the complete Escherichia coli (K12)genome.
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| Web link |
http://ecom2.mwgdna.com/services/array/download
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| Submission date |
Oct 07, 2003 |
| Last update date |
Feb 14, 2011 |
| Organization |
MWG Biotech |
| E-mail(s) |
array@mwgbiotech.com
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| Phone |
1-877-MWG-BTEC
|
| Fax |
1-336-812-9983
|
| Street address |
4170 Mendenhall Oaks Parkway, Suite 160
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| City |
High Point |
| State/province |
NC |
| ZIP/Postal code |
27265 |
| Country |
USA |
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| Samples (151)
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GSM37885, GSM37886, GSM37887, GSM37888, GSM38546, GSM38547
GSM38548, GSM38549, GSM102077, GSM102078, GSM102079, GSM102080, GSM102081, GSM102082, GSM102083, GSM106337, GSM106338, GSM106339, GSM106340, GSM106341, GSM106342, GSM106991, GSM107053, GSM107054, GSM107055, GSM114368, GSM114370, GSM114371, GSM114372, GSM114383, GSM114384, GSM114385, GSM114386, GSM114612, GSM114613, GSM114614, GSM114615, GSM116024, GSM116025, GSM116026, GSM116027, GSM116028, GSM116029, GSM116030, GSM116031, GSM147530, GSM147535, GSM147804, GSM147806, GSM147807, GSM147809, GSM147811, GSM147812, GSM147813, GSM147815, GSM153973, GSM153983, GSM153988, GSM153990, GSM213823, GSM213824, GSM215131, GSM215132, GSM215133, GSM215135, GSM215136, GSM215137, GSM215138, GSM215139, GSM215140, GSM215141, GSM290826, GSM291135, GSM291137, GSM300519, GSM300520, GSM300521, GSM300522, GSM300523, GSM300524, GSM322872, GSM322873, GSM322937, GSM322938, GSM322939, GSM322940, GSM322941, GSM322942, GSM322943, GSM322944, GSM322945, GSM322946, GSM322947, GSM322948, GSM322949, GSM322950, GSM422819, GSM422820, GSM422821, GSM422822, GSM422823, GSM422824, GSM422825, GSM422826, GSM422827, GSM451472, GSM451473, GSM451474, GSM451475, GSM480828, GSM480829, GSM480830, GSM480831, GSM480832, GSM480833, GSM480834, GSM480835, GSM480836, GSM480837, GSM480838, GSM480839, GSM637913, GSM637914, GSM637915, GSM637916, GSM637917, GSM637918, GSM642807, GSM642808, GSM642809, GSM642810, GSM642811, GSM642812, GSM642813, GSM642832, GSM642833, GSM642834, GSM642835, GSM642836, GSM642837, GSM642838, GSM642839, GSM642840, GSM642841, GSM642842, GSM642843, GSM642844, GSM642845, GSM741272, GSM741273, GSM741274
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| Series (25)
|
| GSE2095 |
Transcriptional responses of Escherichia coli to GSNO under defined chemostat conditions. |
| GSE2129 |
Transcriptional responses of Anaerobically grown Escherichia coli to GSNO under defined chemostat conditions. |
| GSE4569 |
Gene expression of E. coli in continuous culture during adaptation to artificial sunlight |
| GSE4706 |
Response and adaptation to growth with low glucose concentration |
| GSE4735 |
E. coli Transcriptome Dynamics during the Transition from Anaerobic to Aerobic Conditions |
| GSE5075 |
Aerobic transcriptional responses of Escherichia coli to NO under defined chemostat conditions. |
| GSE5076 |
Anaerobic transcriptional responses of Escherichia coli to NO under defined chemostat conditions. |
| GSE5084 |
Anaerobic NO-exposed Chemostat Comparison of Wt & norR mutant Responses |
| GSE5098 |
Aerobic and anaerobic transcriptional responses of wild type, hmp and norR to strains to NO in a chemostat |
| GSE5137 |
Aerobic NO-exposed Chemostat Comparison of Wt & norR mutant Responses |
| GSE5139 |
Aerobic NO-exposed Chemostat Comparison of Wt & hmp mutant Responses |
| GSE6407 |
Comparative genomic hybridization of environmental Escherichia coli isolates indicates highly conserved ecophysiology |
| GSE6644 |
E. coli Transcriptome Dynamics during the Transition from Aerobic to Micro-aerobic Conditions |
| GSE8674 |
Influence of nalidixic acid on gene expression of Escherichia coli |
| GSE11562 |
response of Escherichia coli and glutathion mutants to Cadmium |
| GSE11894 |
Transcriptional profiling of Escherichia coli cultured under severe zinc limitation |
| GSE12877 |
Transcriptional profiling of Escherichia coli after addition of CO-RMs to aerobically growing cells |
| GSE12878 |
Transcriptional profiling of Escherichia coli after addition of CO-RMs to anaerobically growing cells |
| GSE13048 |
Transcriptional profiling of Escherichia coli |
| GSE16946 |
Genomic Response of Escherichia coli during coexpression of a bacteriocin release protein |
| GSE18059 |
Escherichia coli colony biofilms: Interior vs. Exterior |
| GSE19370 |
Transcriptional profiling of E. coli after addition of peroxynitrite or hydrogen peroxide to aerobically growing cells |
| GSE25982 |
Effect of the global regulators RpoS and cyclic-AMP/CRP on the transcriptome of Escherichia coli K12 during carbon- and energy-limited growth |
| GSE26187 |
Transcriptional profiling of Escherichia coli during a transition from zinc starvation to surfeit |
| GSE29954 |
Transcriptome analysis of Escherichia coli mutants involved in inorganic polyphosphate metabolism |
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| Data table header descriptions |
| ID |
|
| metarow |
number of subarray row |
| metacolumn |
number of subarray column |
| row |
number of row within subarray |
| column |
number of column within subarray |
| oligo_name |
MWG oligo id |
| description |
gene description |
| ORF |
Locus name |
| SPOT_ID |
spot identifier |
| Data table |
| ID |
metarow |
metacolumn |
row |
column |
oligo_name |
description |
ORF |
SPOT_ID |
| 1.1.1.1 |
1 |
1 |
1 |
1 |
internal control |
internal control |
|
internal control |
| 1.1.1.2 |
1 |
1 |
1 |
2 |
mwgecov2#0101 |
prelipin peptidase dependent protein; ppdD |
b0108 |
|
| 1.1.1.3 |
1 |
1 |
1 |
3 |
mwgecov2#0196 |
putative biotin synthesis protein; yafE |
b0210 |
|
| 1.1.1.4 |
1 |
1 |
1 |
4 |
mwgecov2#0290 |
NAD+-dependent betaine aldehyde dehydrogenase; betB |
b0312 |
|
| 1.1.1.5 |
1 |
1 |
1 |
5 |
mwgecov2#0020 |
transcriptional activator of nhaA; nhaR |
b0020 |
|
| 1.1.1.6 |
1 |
1 |
1 |
6 |
mwgecov2#0097 |
putative DNA repair protein; yacE |
b0103 |
|
| 1.1.1.7 |
1 |
1 |
1 |
7 |
mwgecov2#0192 |
putative phosphatase; yaeD |
b0200 |
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| 1.1.1.8 |
1 |
1 |
1 |
8 |
ara23-2 |
Arabidopsis Control Oligonucleotide |
|
Arabidopsis Control Oligonucleotide |
| 1.1.1.9 |
1 |
1 |
1 |
9 |
mwgecov2#0016 |
IS186 hypothetical protein; yi81_1 |
b0016 |
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| 1.1.1.10 |
1 |
1 |
1 |
10 |
mwgecov2#0093 |
orf, hypothetical protein; yacA |
b0097 |
|
| 1.1.1.11 |
1 |
1 |
1 |
11 |
mwgecov2#0188 |
regulator in colanic acid synthesis; interacts with RcsB; rcsF |
b0196 |
|
| 1.1.1.12 |
1 |
1 |
1 |
12 |
mwgecov2#0284 |
putative dehydrogenase subunit; ykgE |
b0306 |
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| 1.1.1.13 |
1 |
1 |
1 |
13 |
mwgecov2#0012 |
positive regulator for sigma 32 heat shock promoters; htgA |
b0012 |
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| 1.1.1.14 |
1 |
1 |
1 |
14 |
mwgecov2#0089 |
cell division protein; ingrowth of wall at septum; ftsQ |
b0093 |
|
| 1.1.1.15 |
1 |
1 |
1 |
15 |
mwgecov2#0184 |
copper homeostasis protein (lipoprotein); cutF |
b0192 |
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| 1.1.1.16 |
1 |
1 |
1 |
16 |
mwgecov2#0280 |
orf, hypothetical protein; b0302 |
b0302 |
|
| 1.1.1.17 |
1 |
1 |
1 |
17 |
mwgecov2#0008 |
transaldolase B; talB |
b0008 |
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| 1.1.1.18 |
1 |
1 |
1 |
18 |
internal control |
internal control |
|
internal control |
| 1.1.2.1 |
1 |
1 |
2 |
1 |
mwgecov2#0180 |
cell cycle protein; mesJ |
b0188 |
|
| 1.1.2.2 |
1 |
1 |
2 |
2 |
mwgecov2#0276 |
attaching and effacing protein, pathogenesis factor; eaeH |
b0297 |
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Total number of rows: 4608
Table truncated, full table size 360 Kbytes.
| Supplementary data files not provided |
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